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The map label for this gene is ybgC [C]

Identifier: 120610902

GI number: 120610902

Start: 2449056

End: 2449478

Strand: Reverse

Name: ybgC [C]

Synonym: Aave_2228

Alternate gene names: 120610902

Gene position: 2449478-2449056 (Counterclockwise)

Preceding gene: 120610903

Following gene: 120610901

Centisome position: 45.76

GC content: 63.59

Gene sequence:

>423_bases
ATGAGCTTCGGATGGCCCGTGCGCATCTACTGGGAAGACACGGATGCCGGCGGCATCGTCTTCTACGCCAACTACCTGCG
CTTCTTCGAGCGCGCGCGCACCGAATGGCTGCGCTCGCTGGGCGTGGAGCAGCAGCGGCTGCGGGAACTCACGGGAGGCA
TGTTTGTCGTAACCGACGCGCGCCTGCGCTATTTGCGTCCCGCCCGCCTGGACGATGAACTGATTGTTACGGCAGCGCTC
GAGGAAAGTGGAAGGGCATCGCTGACAATACGCCAGCGAGCGCTCCTGAAATCGGAGCACGTGACAGAATCGGAGCCTTC
GCCCCTGTGCGAGGGCACCGTTCGCATCGGATGGGTCGACGCCGCCACGCTGCGCCCCGCCCGGATTCCCGCCCATCTTC
TGGAACAACTCTCATCATCATGA

Upstream 100 bases:

>100_bases
TTCGTGCGCTTTTCCACGGCCAACTCCATGGCGCAGCTGCAGGAAGCCGTGGCACGGCTGTCCCGGCTGCTGGCCTGACG
CGCGGCGCGAGGCACGCCCC

Downstream 100 bases:

>100_bases
ATTCGCAAGACATGTCCATCCTGCACCTGGTGCTCAATGCCAGCTGGGTGGTGCAACTCGTCATGGCGCTGCTGATCGGC
GTGTCCATCGCCAGCTGGGC

Product: 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSFGWPVRIYWEDTDAGGIVFYANYLRFFERARTEWLRSLGVEQQRLRELTGGMFVVTDARLRYLRPARLDDELIVTAAL
EESGRASLTIRQRALLKSEHVTESEPSPLCEGTVRIGWVDAATLRPARIPAHLLEQLSSS

Sequences:

>Translated_140_residues
MSFGWPVRIYWEDTDAGGIVFYANYLRFFERARTEWLRSLGVEQQRLRELTGGMFVVTDARLRYLRPARLDDELIVTAAL
EESGRASLTIRQRALLKSEHVTESEPSPLCEGTVRIGWVDAATLRPARIPAHLLEQLSSS
>Mature_139_residues
SFGWPVRIYWEDTDAGGIVFYANYLRFFERARTEWLRSLGVEQQRLRELTGGMFVVTDARLRYLRPARLDDELIVTAALE
ESGRASLTIRQRALLKSEHVTESEPSPLCEGTVRIGWVDAATLRPARIPAHLLEQLSSS

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=137, Percent_Identity=37.2262773722628, Blast_Score=91, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15979; Mature: 15848

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFGWPVRIYWEDTDAGGIVFYANYLRFFERARTEWLRSLGVEQQRLRELTGGMFVVTDA
CCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECC
RLRYLRPARLDDELIVTAALEESGRASLTIRQRALLKSEHVTESEPSPLCEGTVRIGWVD
HHHHCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEE
AATLRPARIPAHLLEQLSSS
CCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SFGWPVRIYWEDTDAGGIVFYANYLRFFERARTEWLRSLGVEQQRLRELTGGMFVVTDA
CCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEECC
RLRYLRPARLDDELIVTAALEESGRASLTIRQRALLKSEHVTESEPSPLCEGTVRIGWVD
HHHHCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEE
AATLRPARIPAHLLEQLSSS
CCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]