Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120610883

Identifier: 120610883

GI number: 120610883

Start: 2428601

End: 2429311

Strand: Direct

Name: 120610883

Synonym: Aave_2209

Alternate gene names: NA

Gene position: 2428601-2429311 (Clockwise)

Preceding gene: 120610882

Following gene: 120610884

Centisome position: 45.37

GC content: 69.76

Gene sequence:

>711_bases
ATGAAACAACTCGTCGCTTCCGCCCTGATGCTGCTGAGCCCCGTCCTGGTGATGGCGCAGGATGCCGCCCCGGCTCCGGC
CAAGCCCGCTCCCAAGGCTGCTGCGAAAGCCGCCCCCGCCAAGGATTCCAAGGAGGCCAGGAAGCCTGCCGCCAAGTCCA
CCCAGAGCGCGAAGGCTGCCACCGCCAAGGAAGCCAAGAAGCCCGTGCACGTGGCCAAGGCGCATCCGCAGAGCAGCCGA
GCCCAGCTCAAGAGCGCCACCAACCAGGTGGCCTCGGGCCTCATCGCCGCCGAGGCCGCCCTCAGCCCCGCGGAACTCGA
GATCGCCCAGCGCGTGCACACCGGCCACATTCCCTGCGAACTGGGCGCCTCGGTCAACATCGAGGCCGATCCCAAATCGC
CCGGGTACTTCGAGGTCGCCGGCAAGAACTTCCACTACCGCATGACGCCCGTGGCCACGAGCACCGGCGCGGTGCGGCTG
GAGGACCAGAAGGCCGGCGCGGTCTGGATCCAGATCGCCAACAAGTCCATGCTCATGAACCAGAAGCTGGGCCAGCGCCT
GGCCGACGAATGCATGAGCCCGCAGCAGGTCGCCGTCAGCGAGACCATCCGCAAGAACCCGCAGCCGAGCCTGCTGGATG
CGCCCGCGCCGGCACCGGCCGCCGCTGCCGCCCCGGCGGCTGCGCCCGCCGCCGAAGCGCCCGCCAAGTAA

Upstream 100 bases:

>100_bases
CGCGCGGCTGGTTCGATTCCGCCGCGGCAGCGGTCGCCTGACGTACCGGCTGCCCTTCACGACCCCGTTCCCACGACCCC
TCTCCCTTGCTGGAGCTTCC

Downstream 100 bases:

>100_bases
GCGCTGCGGCGTCCTGGCCTGCGATGGACGGGCGCCGCCCGCGGCGCCCGCAGGACTGGCTTTGCCCCCAAAAATCCAAC
GATCGAACCCACCGGAGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MKQLVASALMLLSPVLVMAQDAAPAPAKPAPKAAAKAAPAKDSKEARKPAAKSTQSAKAATAKEAKKPVHVAKAHPQSSR
AQLKSATNQVASGLIAAEAALSPAELEIAQRVHTGHIPCELGASVNIEADPKSPGYFEVAGKNFHYRMTPVATSTGAVRL
EDQKAGAVWIQIANKSMLMNQKLGQRLADECMSPQQVAVSETIRKNPQPSLLDAPAPAPAAAAAPAAAPAAEAPAK

Sequences:

>Translated_236_residues
MKQLVASALMLLSPVLVMAQDAAPAPAKPAPKAAAKAAPAKDSKEARKPAAKSTQSAKAATAKEAKKPVHVAKAHPQSSR
AQLKSATNQVASGLIAAEAALSPAELEIAQRVHTGHIPCELGASVNIEADPKSPGYFEVAGKNFHYRMTPVATSTGAVRL
EDQKAGAVWIQIANKSMLMNQKLGQRLADECMSPQQVAVSETIRKNPQPSLLDAPAPAPAAAAAPAAAPAAEAPAK
>Mature_236_residues
MKQLVASALMLLSPVLVMAQDAAPAPAKPAPKAAAKAAPAKDSKEARKPAAKSTQSAKAATAKEAKKPVHVAKAHPQSSR
AQLKSATNQVASGLIAAEAALSPAELEIAQRVHTGHIPCELGASVNIEADPKSPGYFEVAGKNFHYRMTPVATSTGAVRL
EDQKAGAVWIQIANKSMLMNQKLGQRLADECMSPQQVAVSETIRKNPQPSLLDAPAPAPAAAAAPAAAPAAEAPAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24231; Mature: 24231

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLVASALMLLSPVLVMAQDAAPAPAKPAPKAAAKAAPAKDSKEARKPAAKSTQSAKAA
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHCCHHHHHHHHHHH
TAKEAKKPVHVAKAHPQSSRAQLKSATNQVASGLIAAEAALSPAELEIAQRVHTGHIPCE
HHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEE
LGASVNIEADPKSPGYFEVAGKNFHYRMTPVATSTGAVRLEDQKAGAVWIQIANKSMLMN
CCCEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCEEEEECCCCCEEEEEECCCHHHHH
QKLGQRLADECMSPQQVAVSETIRKNPQPSLLDAPAPAPAAAAAPAAAPAAEAPAK
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKQLVASALMLLSPVLVMAQDAAPAPAKPAPKAAAKAAPAKDSKEARKPAAKSTQSAKAA
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHCCHHHHHHHHHHH
TAKEAKKPVHVAKAHPQSSRAQLKSATNQVASGLIAAEAALSPAELEIAQRVHTGHIPCE
HHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEE
LGASVNIEADPKSPGYFEVAGKNFHYRMTPVATSTGAVRLEDQKAGAVWIQIANKSMLMN
CCCEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCEEEEECCCCCEEEEEECCCHHHHH
QKLGQRLADECMSPQQVAVSETIRKNPQPSLLDAPAPAPAAAAAPAAAPAAEAPAK
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA