Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610883
Identifier: 120610883
GI number: 120610883
Start: 2428601
End: 2429311
Strand: Direct
Name: 120610883
Synonym: Aave_2209
Alternate gene names: NA
Gene position: 2428601-2429311 (Clockwise)
Preceding gene: 120610882
Following gene: 120610884
Centisome position: 45.37
GC content: 69.76
Gene sequence:
>711_bases ATGAAACAACTCGTCGCTTCCGCCCTGATGCTGCTGAGCCCCGTCCTGGTGATGGCGCAGGATGCCGCCCCGGCTCCGGC CAAGCCCGCTCCCAAGGCTGCTGCGAAAGCCGCCCCCGCCAAGGATTCCAAGGAGGCCAGGAAGCCTGCCGCCAAGTCCA CCCAGAGCGCGAAGGCTGCCACCGCCAAGGAAGCCAAGAAGCCCGTGCACGTGGCCAAGGCGCATCCGCAGAGCAGCCGA GCCCAGCTCAAGAGCGCCACCAACCAGGTGGCCTCGGGCCTCATCGCCGCCGAGGCCGCCCTCAGCCCCGCGGAACTCGA GATCGCCCAGCGCGTGCACACCGGCCACATTCCCTGCGAACTGGGCGCCTCGGTCAACATCGAGGCCGATCCCAAATCGC CCGGGTACTTCGAGGTCGCCGGCAAGAACTTCCACTACCGCATGACGCCCGTGGCCACGAGCACCGGCGCGGTGCGGCTG GAGGACCAGAAGGCCGGCGCGGTCTGGATCCAGATCGCCAACAAGTCCATGCTCATGAACCAGAAGCTGGGCCAGCGCCT GGCCGACGAATGCATGAGCCCGCAGCAGGTCGCCGTCAGCGAGACCATCCGCAAGAACCCGCAGCCGAGCCTGCTGGATG CGCCCGCGCCGGCACCGGCCGCCGCTGCCGCCCCGGCGGCTGCGCCCGCCGCCGAAGCGCCCGCCAAGTAA
Upstream 100 bases:
>100_bases CGCGCGGCTGGTTCGATTCCGCCGCGGCAGCGGTCGCCTGACGTACCGGCTGCCCTTCACGACCCCGTTCCCACGACCCC TCTCCCTTGCTGGAGCTTCC
Downstream 100 bases:
>100_bases GCGCTGCGGCGTCCTGGCCTGCGATGGACGGGCGCCGCCCGCGGCGCCCGCAGGACTGGCTTTGCCCCCAAAAATCCAAC GATCGAACCCACCGGAGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MKQLVASALMLLSPVLVMAQDAAPAPAKPAPKAAAKAAPAKDSKEARKPAAKSTQSAKAATAKEAKKPVHVAKAHPQSSR AQLKSATNQVASGLIAAEAALSPAELEIAQRVHTGHIPCELGASVNIEADPKSPGYFEVAGKNFHYRMTPVATSTGAVRL EDQKAGAVWIQIANKSMLMNQKLGQRLADECMSPQQVAVSETIRKNPQPSLLDAPAPAPAAAAAPAAAPAAEAPAK
Sequences:
>Translated_236_residues MKQLVASALMLLSPVLVMAQDAAPAPAKPAPKAAAKAAPAKDSKEARKPAAKSTQSAKAATAKEAKKPVHVAKAHPQSSR AQLKSATNQVASGLIAAEAALSPAELEIAQRVHTGHIPCELGASVNIEADPKSPGYFEVAGKNFHYRMTPVATSTGAVRL EDQKAGAVWIQIANKSMLMNQKLGQRLADECMSPQQVAVSETIRKNPQPSLLDAPAPAPAAAAAPAAAPAAEAPAK >Mature_236_residues MKQLVASALMLLSPVLVMAQDAAPAPAKPAPKAAAKAAPAKDSKEARKPAAKSTQSAKAATAKEAKKPVHVAKAHPQSSR AQLKSATNQVASGLIAAEAALSPAELEIAQRVHTGHIPCELGASVNIEADPKSPGYFEVAGKNFHYRMTPVATSTGAVRL EDQKAGAVWIQIANKSMLMNQKLGQRLADECMSPQQVAVSETIRKNPQPSLLDAPAPAPAAAAAPAAAPAAEAPAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24231; Mature: 24231
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLVASALMLLSPVLVMAQDAAPAPAKPAPKAAAKAAPAKDSKEARKPAAKSTQSAKAA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHCCHHHHHHHHHHH TAKEAKKPVHVAKAHPQSSRAQLKSATNQVASGLIAAEAALSPAELEIAQRVHTGHIPCE HHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEE LGASVNIEADPKSPGYFEVAGKNFHYRMTPVATSTGAVRLEDQKAGAVWIQIANKSMLMN CCCEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCEEEEECCCCCEEEEEECCCHHHHH QKLGQRLADECMSPQQVAVSETIRKNPQPSLLDAPAPAPAAAAAPAAAPAAEAPAK HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCC >Mature Secondary Structure MKQLVASALMLLSPVLVMAQDAAPAPAKPAPKAAAKAAPAKDSKEARKPAAKSTQSAKAA CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHCCHHHHHHHHHHH TAKEAKKPVHVAKAHPQSSRAQLKSATNQVASGLIAAEAALSPAELEIAQRVHTGHIPCE HHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEE LGASVNIEADPKSPGYFEVAGKNFHYRMTPVATSTGAVRLEDQKAGAVWIQIANKSMLMN CCCEEEEECCCCCCCEEEECCCCEEEEECCCCCCCCEEEEECCCCCEEEEEECCCHHHHH QKLGQRLADECMSPQQVAVSETIRKNPQPSLLDAPAPAPAAAAAPAAAPAAEAPAK HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA