| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610806
Identifier: 120610806
GI number: 120610806
Start: 2343998
End: 2344996
Strand: Direct
Name: 120610806
Synonym: Aave_2130
Alternate gene names: NA
Gene position: 2343998-2344996 (Clockwise)
Preceding gene: 120610805
Following gene: 120610807
Centisome position: 43.79
GC content: 54.15
Gene sequence:
>999_bases ATGGCGACGAAGAGACCTCGGCCGCCAGAGGCCCAAACGCGCAACGCGCGTGTCAAACCCAATGACTACCCCTCACCGGG GCCCATTGGCAACACTACCGGCATCGTGGTGCCGGACACCGCGCCCAATCCACATGGAAACAGCGCCCCGCCCATCAAGC CCACCGAGCCTGAGAAAAGCTGGTGGAGCCGCTGGGGCAGCGATGTGGTGCATACCGGGCTGGATGTCGTCGGGCTGATC CCGGGTGTCGGCGAGATCGCGGATGGCGCAAACGCGCTGATCTATCTGGCGGAGGGCGATAAGGTCAACGCCGCCATCAG CGCTGCCGCCATGATCCCTGGCGCTGGCATGGCTGCCACTGGCGCCAAGTACGGCAAGAAAGCCGCAGGCGCCGCCGCCG AAGCGATTGGCAAAAAGACCGCCCGCGAGGCGGAAGAGGCGCTGGTGAAACGGGAGGCCAAGGAAGCCGAAGAGGCTGCG GCCAAGAAGGCGGAAGGCAATGGCGGCGGAAAGGACAAGGCAAAGCCTAAGAAACACAAGGATTGTGGCAAAAAGGTTCC TTACAACGACAAAAAATCGCTAAAGGGTAGCGGTCTGGAAAAGGACCACACGCCTTCAGGAGCGGCTTTGGAACTAGCGG CACAAAATAAGATTGATGAATTGATTGCTAATGGTGCCAGGATTACAGAAAAGCAACAAAAGGCAATTTTGAACTCCGTT AGAAATAATGCGCCTACAATAGCTATTCCGCCTGACATACATGCTCTAGGCGATACTTGGCGAGCCAAGAACAAGCCGCA TGTGATAGAAAAAGATGCGGCAAACTTAAAAGATGCAGTTGCTAGAAATACAAAAACAATATCTGAGGCAATGAAAAATA AAGACCACGGATGCAAAGAGGCATACGATAAGGCGGCAGAAGAGCTTAGAAATATGGACTGGGAAAAATATATTGATGAA GCAATCCAGGTAGGCACAAAAGCAAAGGTGAAAAAATGA
Upstream 100 bases:
>100_bases CCATGACATTGACCACAGCAAATCCGTGTATGTCAACGGACGGGCCATCGTGCGCACGGCCGACAAAATGTGGATGAACT GGAAGAAGCCGTAGCATCCC
Downstream 100 bases:
>100_bases ATGCAATTGATTTGATTGATTTTCTCGGGCACAGCAGTATTTATCAGCCATTTGATGAGTTCCTGACAAAAAATGGAGTG AAAAAGAGGCCTGCTGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MATKRPRPPEAQTRNARVKPNDYPSPGPIGNTTGIVVPDTAPNPHGNSAPPIKPTEPEKSWWSRWGSDVVHTGLDVVGLI PGVGEIADGANALIYLAEGDKVNAAISAAAMIPGAGMAATGAKYGKKAAGAAAEAIGKKTAREAEEALVKREAKEAEEAA AKKAEGNGGGKDKAKPKKHKDCGKKVPYNDKKSLKGSGLEKDHTPSGAALELAAQNKIDELIANGARITEKQQKAILNSV RNNAPTIAIPPDIHALGDTWRAKNKPHVIEKDAANLKDAVARNTKTISEAMKNKDHGCKEAYDKAAEELRNMDWEKYIDE AIQVGTKAKVKK
Sequences:
>Translated_332_residues MATKRPRPPEAQTRNARVKPNDYPSPGPIGNTTGIVVPDTAPNPHGNSAPPIKPTEPEKSWWSRWGSDVVHTGLDVVGLI PGVGEIADGANALIYLAEGDKVNAAISAAAMIPGAGMAATGAKYGKKAAGAAAEAIGKKTAREAEEALVKREAKEAEEAA AKKAEGNGGGKDKAKPKKHKDCGKKVPYNDKKSLKGSGLEKDHTPSGAALELAAQNKIDELIANGARITEKQQKAILNSV RNNAPTIAIPPDIHALGDTWRAKNKPHVIEKDAANLKDAVARNTKTISEAMKNKDHGCKEAYDKAAEELRNMDWEKYIDE AIQVGTKAKVKK >Mature_331_residues ATKRPRPPEAQTRNARVKPNDYPSPGPIGNTTGIVVPDTAPNPHGNSAPPIKPTEPEKSWWSRWGSDVVHTGLDVVGLIP GVGEIADGANALIYLAEGDKVNAAISAAAMIPGAGMAATGAKYGKKAAGAAAEAIGKKTAREAEEALVKREAKEAEEAAA KKAEGNGGGKDKAKPKKHKDCGKKVPYNDKKSLKGSGLEKDHTPSGAALELAAQNKIDELIANGARITEKQQKAILNSVR NNAPTIAIPPDIHALGDTWRAKNKPHVIEKDAANLKDAVARNTKTISEAMKNKDHGCKEAYDKAAEELRNMDWEKYIDEA IQVGTKAKVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35166; Mature: 35035
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKRPRPPEAQTRNARVKPNDYPSPGPIGNTTGIVVPDTAPNPHGNSAPPIKPTEPEKS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHH WWSRWGSDVVHTGLDVVGLIPGVGEIADGANALIYLAEGDKVNAAISAAAMIPGAGMAAT HHHHHCHHHHHHCHHHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHH GAKYGKKAAGAAAEAIGKKTAREAEEALVKREAKEAEEAAAKKAEGNGGGKDKAKPKKHK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH DCGKKVPYNDKKSLKGSGLEKDHTPSGAALELAAQNKIDELIANGARITEKQQKAILNSV HHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RNNAPTIAIPPDIHALGDTWRAKNKPHVIEKDAANLKDAVARNTKTISEAMKNKDHGCKE HCCCCEEEECCCHHHHCCHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AYDKAAEELRNMDWEKYIDEAIQVGTKAKVKK HHHHHHHHHHCCCHHHHHHHHHHHCCHHCCCC >Mature Secondary Structure ATKRPRPPEAQTRNARVKPNDYPSPGPIGNTTGIVVPDTAPNPHGNSAPPIKPTEPEKS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHH WWSRWGSDVVHTGLDVVGLIPGVGEIADGANALIYLAEGDKVNAAISAAAMIPGAGMAAT HHHHHCHHHHHHCHHHHHHCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCHHH GAKYGKKAAGAAAEAIGKKTAREAEEALVKREAKEAEEAAAKKAEGNGGGKDKAKPKKHK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH DCGKKVPYNDKKSLKGSGLEKDHTPSGAALELAAQNKIDELIANGARITEKQQKAILNSV HHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RNNAPTIAIPPDIHALGDTWRAKNKPHVIEKDAANLKDAVARNTKTISEAMKNKDHGCKE HCCCCEEEECCCHHHHCCHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AYDKAAEELRNMDWEKYIDEAIQVGTKAKVKK HHHHHHHHHHCCCHHHHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA