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The map label for this gene is vdlD [H]

Identifier: 120610778

GI number: 120610778

Start: 2302576

End: 2303082

Strand: Direct

Name: vdlD [H]

Synonym: Aave_2101

Alternate gene names: 120610778

Gene position: 2302576-2303082 (Clockwise)

Preceding gene: 120610773

Following gene: 120610786

Centisome position: 43.02

GC content: 66.47

Gene sequence:

>507_bases
ATGACCATGCCCCACAGTCCAGCCCACCAGCTCAGCATGACGGTGCTCATGTCGCCCGACATGGCCAATTTCTCCGGCAA
TGTGCATGGGGGCGCGGTCCTCAAGCTGCTGGACCAGGTCGCCTACTCCTGCGCGGCCCGCTATTCGGGCAGTTACGTGG
TCACGCTGAGCGTGGACCAGGTGACCTTCCTGCAGCCGATTCACGTGGGCGAGCTGGTCACCTTCCTGGCGAGCGTGAAC
TACACCGGCACCTCGTCGATGGAGATCGGCATCAAGGTGGTGGCCGAGGAGATCCGCACCCAGATCGTGCGGCACGTGAA
CAGTTGCTTCTTCACGATGGTGGCTGTGGACGAGGCCCGCAAGCCCACGCCGGTGCCGCCGTTGTCGCCCTCCACGGCGG
ACGAGCGGCGGCGCTGGGAGGCGGCGCTGCTGCGCAAGAGCCTGCGCAAGGAGCAGGCGGAGCGTTTCGCTCAGATCCAG
CGCGAGGCGGCGCTGGTGCACGGCTGA

Upstream 100 bases:

>100_bases
ACGCCTCTGGATTGCCGGGGCGCAGACCCCATGCCGGCAAGGGTTTTCAGGGCGCGACGGCTGCGTTCCGGGCCCGGTCG
CCACCTCTAGAATCGCCGCC

Downstream 100 bases:

>100_bases
CGGCGGTGGGCCGCCGCAGGCGCCGCCCGGGCTGGCCGGCGCTTGGCGCCTGCAGGCGCGCCGGTCAGCGCGCCGCGCAG
AAACCGAATTCGGCGGTGCC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTMPHSPAHQLSMTVLMSPDMANFSGNVHGGAVLKLLDQVAYSCAARYSGSYVVTLSVDQVTFLQPIHVGELVTFLASVN
YTGTSSMEIGIKVVAEEIRTQIVRHVNSCFFTMVAVDEARKPTPVPPLSPSTADERRRWEAALLRKSLRKEQAERFAQIQ
REAALVHG

Sequences:

>Translated_168_residues
MTMPHSPAHQLSMTVLMSPDMANFSGNVHGGAVLKLLDQVAYSCAARYSGSYVVTLSVDQVTFLQPIHVGELVTFLASVN
YTGTSSMEIGIKVVAEEIRTQIVRHVNSCFFTMVAVDEARKPTPVPPLSPSTADERRRWEAALLRKSLRKEQAERFAQIQ
REAALVHG
>Mature_167_residues
TMPHSPAHQLSMTVLMSPDMANFSGNVHGGAVLKLLDQVAYSCAARYSGSYVVTLSVDQVTFLQPIHVGELVTFLASVNY
TGTSSMEIGIKVVAEEIRTQIVRHVNSCFFTMVAVDEARKPTPVPPLSPSTADERRRWEAALLRKSLRKEQAERFAQIQR
EAALVHG

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Homo sapiens, GI32528284, Length=151, Percent_Identity=35.7615894039735, Blast_Score=88, Evalue=3e-18,
Organism=Homo sapiens, GI32528286, Length=151, Percent_Identity=35.7615894039735, Blast_Score=88, Evalue=3e-18,
Organism=Homo sapiens, GI75709208, Length=151, Percent_Identity=35.7615894039735, Blast_Score=88, Evalue=3e-18,
Organism=Homo sapiens, GI32528282, Length=151, Percent_Identity=35.7615894039735, Blast_Score=88, Evalue=3e-18,
Organism=Homo sapiens, GI18640736, Length=137, Percent_Identity=32.8467153284672, Blast_Score=76, Evalue=1e-14,
Organism=Homo sapiens, GI22165355, Length=136, Percent_Identity=33.0882352941176, Blast_Score=74, Evalue=5e-14,
Organism=Homo sapiens, GI22165400, Length=136, Percent_Identity=33.0882352941176, Blast_Score=74, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 18499; Mature: 18367

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMPHSPAHQLSMTVLMSPDMANFSGNVHGGAVLKLLDQVAYSCAARYSGSYVVTLSVDQ
CCCCCCCHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
VTFLQPIHVGELVTFLASVNYTGTSSMEIGIKVVAEEIRTQIVRHVNSCFFTMVAVDEAR
EEHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KPTPVPPLSPSTADERRRWEAALLRKSLRKEQAERFAQIQREAALVHG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TMPHSPAHQLSMTVLMSPDMANFSGNVHGGAVLKLLDQVAYSCAARYSGSYVVTLSVDQ
CCCCCCHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
VTFLQPIHVGELVTFLASVNYTGTSSMEIGIKVVAEEIRTQIVRHVNSCFFTMVAVDEAR
EEHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KPTPVPPLSPSTADERRRWEAALLRKSLRKEQAERFAQIQREAALVHG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]