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The map label for this gene is ydfF [H]

Identifier: 120610773

GI number: 120610773

Start: 2296691

End: 2297458

Strand: Direct

Name: ydfF [H]

Synonym: Aave_2096

Alternate gene names: 120610773

Gene position: 2296691-2297458 (Clockwise)

Preceding gene: 120610768

Following gene: 120610778

Centisome position: 42.91

GC content: 78.26

Gene sequence:

>768_bases
GTGCCGGAGGCGGCCTGCGGCACACTGCGGAGCGTGAACACCAACCAGATCGCCCGCGTGGCCGGGCTTATCGGCGAACC
CGCCCGCGCGGCCATGCTGCTGGCCCTCATGGACGGGCGGGCGCTCACCGCGCGCGAACTCGCGGGCGCCGCGCGGATTT
CCGCGGCCACCGCCAGCCGGCACCTGGCGCTGCTGGTGGATGCCGGCCTGCTGGCCGTGCGCAGCCAGGGGCGCCATCGT
TACCACGCCCTGGCCGGCGCCGATGTGGCGCGGCTACTCGAAGGACTGATGCAGTTCACCGTGCGCCCCGCGGCCGTCCC
GCCGCGCACCGTGGCTGCGGGGCCGCGCGATGCGGCGCTGCGCATGGCGCGCACCTGCTACGACCATCTGGCAGGCCGCC
TGGGCGTGGCGGTGGCCGACCACCTGCTGGAAGAGGGCGCCGTCGAGTTCGATGGCGAGGAGGGCGGCCGCGCCACGGAC
CGGGCCGCCGCCGTGCTCGCTCGCCTGGGCCTGGAGGCTGCCGCCGCCCTGGACGGCGGCGCGCGCCGGCCCGTGTGCCG
CCCCTGCCTGGACTGGAGCGAGCGCCGTCCCCACCTGGCCGGCCGGCTGGGCGCCCTGGTCTGCGCCCATTGCCTGGACA
GCGGCTGGCTGGCGCGCGGCGCCGGCTCCCGCGCGCTGGCCGTCACGCCGCGCGGTGCGGTGGCGCTGCGGGATGCGCTG
GGCGTGGCCCGCTGGGCCGAGGTGACGGGGCCCGCGCAGAGGGGCTGA

Upstream 100 bases:

>100_bases
GCGGAAAACGGCGCGAGGCATGCAGTGAAAGGTGCATGCGTTGCGCACCGGTCCATTGGACGGGCCGCGCCGGACGGGAT
GCTTCGCCCGGTAGCGAAGC

Downstream 100 bases:

>100_bases
GGGGGGGCGGCACACCGCCCGCACTGCGGTTATCGTCCGGTGCCGCCCTGTGCCGGCAGCGCCTGCGCGCAGGCATGCGC
GCTCGCCCAGGCCCACTGGA

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MPEAACGTLRSVNTNQIARVAGLIGEPARAAMLLALMDGRALTARELAGAARISAATASRHLALLVDAGLLAVRSQGRHR
YHALAGADVARLLEGLMQFTVRPAAVPPRTVAAGPRDAALRMARTCYDHLAGRLGVAVADHLLEEGAVEFDGEEGGRATD
RAAAVLARLGLEAAAALDGGARRPVCRPCLDWSERRPHLAGRLGALVCAHCLDSGWLARGAGSRALAVTPRGAVALRDAL
GVARWAEVTGPAQRG

Sequences:

>Translated_255_residues
MPEAACGTLRSVNTNQIARVAGLIGEPARAAMLLALMDGRALTARELAGAARISAATASRHLALLVDAGLLAVRSQGRHR
YHALAGADVARLLEGLMQFTVRPAAVPPRTVAAGPRDAALRMARTCYDHLAGRLGVAVADHLLEEGAVEFDGEEGGRATD
RAAAVLARLGLEAAAALDGGARRPVCRPCLDWSERRPHLAGRLGALVCAHCLDSGWLARGAGSRALAVTPRGAVALRDAL
GVARWAEVTGPAQRG
>Mature_254_residues
PEAACGTLRSVNTNQIARVAGLIGEPARAAMLLALMDGRALTARELAGAARISAATASRHLALLVDAGLLAVRSQGRHRY
HALAGADVARLLEGLMQFTVRPAAVPPRTVAAGPRDAALRMARTCYDHLAGRLGVAVADHLLEEGAVEFDGEEGGRATDR
AAAVLARLGLEAAAALDGGARRPVCRPCLDWSERRPHLAGRLGALVCAHCLDSGWLARGAGSRALAVTPRGAVALRDALG
VARWAEVTGPAQRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 26411; Mature: 26280

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEAACGTLRSVNTNQIARVAGLIGEPARAAMLLALMDGRALTARELAGAARISAATASR
CCCCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
HLALLVDAGLLAVRSQGRHRYHALAGADVARLLEGLMQFTVRPAAVPPRTVAAGPRDAAL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
RMARTCYDHLAGRLGVAVADHLLEEGAVEFDGEEGGRATDRAAAVLARLGLEAAAALDGG
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
ARRPVCRPCLDWSERRPHLAGRLGALVCAHCLDSGWLARGAGSRALAVTPRGAVALRDAL
CCCCCHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCEECCCCCCEEEECCCCHHHHHHHH
GVARWAEVTGPAQRG
HHHHHHHHCCCCCCC
>Mature Secondary Structure 
PEAACGTLRSVNTNQIARVAGLIGEPARAAMLLALMDGRALTARELAGAARISAATASR
CCCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
HLALLVDAGLLAVRSQGRHRYHALAGADVARLLEGLMQFTVRPAAVPPRTVAAGPRDAAL
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
RMARTCYDHLAGRLGVAVADHLLEEGAVEFDGEEGGRATDRAAAVLARLGLEAAAALDGG
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
ARRPVCRPCLDWSERRPHLAGRLGALVCAHCLDSGWLARGAGSRALAVTPRGAVALRDAL
CCCCCHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCCEECCCCCCEEEECCCCHHHHHHHH
GVARWAEVTGPAQRG
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]