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The map label for this gene is ydiF [H]

Identifier: 120610675

GI number: 120610675

Start: 2166482

End: 2168080

Strand: Direct

Name: ydiF [H]

Synonym: Aave_1995

Alternate gene names: 120610675

Gene position: 2166482-2168080 (Clockwise)

Preceding gene: 120610673

Following gene: 120610680

Centisome position: 40.47

GC content: 74.73

Gene sequence:

>1599_bases
GTGCAGTGGTGTCCTCCCGGCGGCGAGCCGCTGTGGGCCGAGCCGCCGACGTTGAGCCTGCCGCCCGGCGTCACCGGCCT
GGTGGGCGACAACGGCGTGGGCAAGAGCGTGCTGCTGTCGATCGCGGCCGGCGTGTTGCAGCCGTCTTCCGGCAATGTGC
TGTGCACGGGGACATTGCGGGCCGTGGGCCAGCATCCGCCGGGCGCGACCCTGGCCGCCCTGGCAGGCCTCGACCGCGAG
CTGGAGGCATTGCGGCGGCTGGAGTGCGGCCTGGGCAGCGCCGAGGACCTGCTTCTGGCGGACGGCCGCTGGGACTGGCC
GGCCCGCTGGCGGCAGGCACTGGAGGGGGCCGGCCTCGGCCACCTGCCGGGCGATGCCGATGCGAGCCGCCTCAGCGGCG
GAGAGCGTGCGCGAGTGGCGCTGGCCGGCACCTTTTTTTCGCAGGCCGAGGTGCTGCTGCTGGACGAGCCCACCAACCAC
CTGGATGGCGAGGCACGGCGCTGGCTGCGGCAGGCGCTGGATGGCGGGCGTGGCGGACCGCGCGCCGTGCTGGTGGCGAG
CCACGACCGGGCGCTGCTGGAGGGCGCGGACCGCATCGCGGAGCTGTCACCACGCGGCTTGCGCCTGTACGGCGGCGGCT
GGAGCGCGTATGCGGCACGGAAGGCTGCCGAAACCCAGGCCGCGCACGAAGCGTTGCGGCAAGCGCGTGCGCAGCGCGAT
GGGGCGTTGCGCGAACTGCGCCGCCAGCAGCAGGCCCAGGCCCGGCGCACCGCGCGCGGAAGTGCATCACGCCGGGACGC
CAACCAGTCGCCCCTGGTACTGGACCGCATGAAGGACCAGGCCGAAGCGCACGCCGGACGGGAGGGCGTGCGCCGGCAGC
AGGTGCGTGAACGGATCGAGGAGAGCGTGCGCGAAGCGTTCGCCAGGGTGGGGCCGGAGGCGGCCGTGGCGCTGCCGCTG
CCTGCCAGCGCCATTCCGCCGGGCAAGCCGGTGCTGCGGCTGGAGGGGGCGGTGCCGCCGTTCGGGCCGAAGACGCCGCT
CGACGGGCTCTGGAGCGGCCCGGTACGCATCGCCGTGACCGGGCCCAATGGCTGCGGCAAGAGCAGCCTGCTGCGCATGC
TGGCGGGGCACCTGGTGCCCGTAGCCGGCCGCGTTGTCTGCCAAGTGCGTTCGGTCTGGCTGGACCAGGATGCCCGGGCG
CTGCTGCCGCCGGAGCGCAGCGTGATGGAAGTGCTCGCGCTGGCGGAGTCGCCGCTGCCCACGGCGGAACTGCGCACGCG
CCTGGCGCAGCTCGGCCTGGACGCGGACCGTGTGCAGCGCCCTTCCGGCAGCCTCAGCGGCGGCGAGCGCGTGCGGGCGG
CGCTGGCCCGTGCGCTGTGGGGTGGCGCGCCCGCGCAGCTGCTGCTGTTGGACGAGCCCTCCAATCACCTGGATGCCCGC
GCGGTGCAGGCGCTGCAGGAGGCACTGTCGTCGTTCACCGGGGCGATGGTGGTGGTGTCGCACGACCGGCATTTCCTGCA
GGCGCTGGCGCCGCAGGTGGCCTGGAGCTGGGAGGACGGGCGCTGGAACCTCGACGGCGTGCTGGAGCCGGCGGGCTGA

Upstream 100 bases:

>100_bases
TTCTTCCCGCAGCGCGCCGCGCGCTGCCTCTTCCTTTTCCGATCAGACCTTGTCCTCCCATGGCGCGGAGGGGACGGCCT
CGAGGCTTCAGTTGCGCCAG

Downstream 100 bases:

>100_bases
GCGGGGCGAGGCGGCCCCCGGGCGCCTTCTGGAGCGCCCGCCAGGCCCGCGGCTCAGGATGCGAGCGCGGCGTGCTTCCA
GGCCGTGGCGGCGGCTTCCG

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 532; Mature: 532

Protein sequence:

>532_residues
MQWCPPGGEPLWAEPPTLSLPPGVTGLVGDNGVGKSVLLSIAAGVLQPSSGNVLCTGTLRAVGQHPPGATLAALAGLDRE
LEALRRLECGLGSAEDLLLADGRWDWPARWRQALEGAGLGHLPGDADASRLSGGERARVALAGTFFSQAEVLLLDEPTNH
LDGEARRWLRQALDGGRGGPRAVLVASHDRALLEGADRIAELSPRGLRLYGGGWSAYAARKAAETQAAHEALRQARAQRD
GALRELRRQQQAQARRTARGSASRRDANQSPLVLDRMKDQAEAHAGREGVRRQQVRERIEESVREAFARVGPEAAVALPL
PASAIPPGKPVLRLEGAVPPFGPKTPLDGLWSGPVRIAVTGPNGCGKSSLLRMLAGHLVPVAGRVVCQVRSVWLDQDARA
LLPPERSVMEVLALAESPLPTAELRTRLAQLGLDADRVQRPSGSLSGGERVRAALARALWGGAPAQLLLLDEPSNHLDAR
AVQALQEALSSFTGAMVVVSHDRHFLQALAPQVAWSWEDGRWNLDGVLEPAG

Sequences:

>Translated_532_residues
MQWCPPGGEPLWAEPPTLSLPPGVTGLVGDNGVGKSVLLSIAAGVLQPSSGNVLCTGTLRAVGQHPPGATLAALAGLDRE
LEALRRLECGLGSAEDLLLADGRWDWPARWRQALEGAGLGHLPGDADASRLSGGERARVALAGTFFSQAEVLLLDEPTNH
LDGEARRWLRQALDGGRGGPRAVLVASHDRALLEGADRIAELSPRGLRLYGGGWSAYAARKAAETQAAHEALRQARAQRD
GALRELRRQQQAQARRTARGSASRRDANQSPLVLDRMKDQAEAHAGREGVRRQQVRERIEESVREAFARVGPEAAVALPL
PASAIPPGKPVLRLEGAVPPFGPKTPLDGLWSGPVRIAVTGPNGCGKSSLLRMLAGHLVPVAGRVVCQVRSVWLDQDARA
LLPPERSVMEVLALAESPLPTAELRTRLAQLGLDADRVQRPSGSLSGGERVRAALARALWGGAPAQLLLLDEPSNHLDAR
AVQALQEALSSFTGAMVVVSHDRHFLQALAPQVAWSWEDGRWNLDGVLEPAG
>Mature_532_residues
MQWCPPGGEPLWAEPPTLSLPPGVTGLVGDNGVGKSVLLSIAAGVLQPSSGNVLCTGTLRAVGQHPPGATLAALAGLDRE
LEALRRLECGLGSAEDLLLADGRWDWPARWRQALEGAGLGHLPGDADASRLSGGERARVALAGTFFSQAEVLLLDEPTNH
LDGEARRWLRQALDGGRGGPRAVLVASHDRALLEGADRIAELSPRGLRLYGGGWSAYAARKAAETQAAHEALRQARAQRD
GALRELRRQQQAQARRTARGSASRRDANQSPLVLDRMKDQAEAHAGREGVRRQQVRERIEESVREAFARVGPEAAVALPL
PASAIPPGKPVLRLEGAVPPFGPKTPLDGLWSGPVRIAVTGPNGCGKSSLLRMLAGHLVPVAGRVVCQVRSVWLDQDARA
LLPPERSVMEVLALAESPLPTAELRTRLAQLGLDADRVQRPSGSLSGGERVRAALARALWGGAPAQLLLLDEPSNHLDAR
AVQALQEALSSFTGAMVVVSHDRHFLQALAPQVAWSWEDGRWNLDGVLEPAG

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=527, Percent_Identity=29.6015180265655, Blast_Score=149, Evalue=9e-36,
Organism=Homo sapiens, GI27881506, Length=515, Percent_Identity=27.5728155339806, Blast_Score=131, Evalue=2e-30,
Organism=Homo sapiens, GI10947137, Length=515, Percent_Identity=27.5728155339806, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI10947135, Length=537, Percent_Identity=28.8640595903166, Blast_Score=124, Evalue=3e-28,
Organism=Homo sapiens, GI69354671, Length=537, Percent_Identity=28.8640595903166, Blast_Score=123, Evalue=4e-28,
Organism=Escherichia coli, GI1789751, Length=537, Percent_Identity=31.2849162011173, Blast_Score=191, Evalue=1e-49,
Organism=Escherichia coli, GI1787041, Length=546, Percent_Identity=28.9377289377289, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1787182, Length=526, Percent_Identity=29.467680608365, Blast_Score=150, Evalue=3e-37,
Organism=Escherichia coli, GI2367384, Length=546, Percent_Identity=30.5860805860806, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI87081791, Length=184, Percent_Identity=33.695652173913, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI87081834, Length=194, Percent_Identity=32.9896907216495, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=497, Percent_Identity=29.5774647887324, Blast_Score=158, Evalue=8e-39,
Organism=Caenorhabditis elegans, GI17555318, Length=515, Percent_Identity=28.9320388349515, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17553372, Length=535, Percent_Identity=29.1588785046729, Blast_Score=136, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6320874, Length=521, Percent_Identity=26.679462571977, Blast_Score=132, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6321121, Length=542, Percent_Identity=26.3837638376384, Blast_Score=115, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6323278, Length=160, Percent_Identity=33.75, Blast_Score=84, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6324314, Length=161, Percent_Identity=35.4037267080745, Blast_Score=84, Evalue=7e-17,
Organism=Saccharomyces cerevisiae, GI6325030, Length=162, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24641342, Length=502, Percent_Identity=30.2788844621514, Blast_Score=164, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24642252, Length=515, Percent_Identity=28.7378640776699, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI18859989, Length=515, Percent_Identity=28.7378640776699, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24666836, Length=540, Percent_Identity=29.6296296296296, Blast_Score=150, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 56541; Mature: 56541

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWCPPGGEPLWAEPPTLSLPPGVTGLVGDNGVGKSVLLSIAAGVLQPSSGNVLCTGTLR
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHH
AVGQHPPGATLAALAGLDRELEALRRLECGLGSAEDLLLADGRWDWPARWRQALEGAGLG
HHCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHCCCCC
HLPGDADASRLSGGERARVALAGTFFSQAEVLLLDEPTNHLDGEARRWLRQALDGGRGGP
CCCCCCCHHHCCCCCCEEEEEEEEHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCC
RAVLVASHDRALLEGADRIAELSPRGLRLYGGGWSAYAARKAAETQAAHEALRQARAQRD
CEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALRELRRQQQAQARRTARGSASRRDANQSPLVLDRMKDQAEAHAGREGVRRQQVRERIE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
ESVREAFARVGPEAAVALPLPASAIPPGKPVLRLEGAVPPFGPKTPLDGLWSGPVRIAVT
HHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEE
GPNGCGKSSLLRMLAGHLVPVAGRVVCQVRSVWLDQDARALLPPERSVMEVLALAESPLP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
TAELRTRLAQLGLDADRVQRPSGSLSGGERVRAALARALWGGAPAQLLLLDEPSNHLDAR
HHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHH
AVQALQEALSSFTGAMVVVSHDRHFLQALAPQVAWSWEDGRWNLDGVLEPAG
HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQWCPPGGEPLWAEPPTLSLPPGVTGLVGDNGVGKSVLLSIAAGVLQPSSGNVLCTGTLR
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEEEHHH
AVGQHPPGATLAALAGLDRELEALRRLECGLGSAEDLLLADGRWDWPARWRQALEGAGLG
HHCCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHCCCCC
HLPGDADASRLSGGERARVALAGTFFSQAEVLLLDEPTNHLDGEARRWLRQALDGGRGGP
CCCCCCCHHHCCCCCCEEEEEEEEHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCC
RAVLVASHDRALLEGADRIAELSPRGLRLYGGGWSAYAARKAAETQAAHEALRQARAQRD
CEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALRELRRQQQAQARRTARGSASRRDANQSPLVLDRMKDQAEAHAGREGVRRQQVRERIE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
ESVREAFARVGPEAAVALPLPASAIPPGKPVLRLEGAVPPFGPKTPLDGLWSGPVRIAVT
HHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEE
GPNGCGKSSLLRMLAGHLVPVAGRVVCQVRSVWLDQDARALLPPERSVMEVLALAESPLP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
TAELRTRLAQLGLDADRVQRPSGSLSGGERVRAALARALWGGAPAQLLLLDEPSNHLDAR
HHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHH
AVQALQEALSSFTGAMVVVSHDRHFLQALAPQVAWSWEDGRWNLDGVLEPAG
HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]