| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610673
Identifier: 120610673
GI number: 120610673
Start: 2163553
End: 2165400
Strand: Direct
Name: 120610673
Synonym: Aave_1993
Alternate gene names: NA
Gene position: 2163553-2165400 (Clockwise)
Preceding gene: 120610669
Following gene: 120610675
Centisome position: 40.42
GC content: 70.67
Gene sequence:
>1848_bases ATGAACGCATCTTCCGAATTCCGCAAGGGCCTCCTGAAAGTGGCCTTGCTCACCCTGGTTTCCCTCTTTCTGGTTCCCGC CGCGACGATGCTGTTCGCGCGGCACGTGCAGGGCGCGGAAGATGCCCGGTTCCTGGCGGACATCGAGCGCCGCATCGATG CCGAGGTGTCGATGCCCGCGGCCGAGAAGGAGGCCCAGCGCACGTTCTTCCGCAGCCATCCGCCTTCCGGCGCCTGCCAT GACGCGCATCCGCGCGTCGCCGCGGTGCGCGAGGGCCTGTGCGGCCGTTTCTCGCCCGCCTGGCAGTTCGATCTGGCCCA CCGGCTGTCGGCCGCGACGCTGCTGGGCGGCGCCGCGCTGCTGATCGCGGTGCTCGGGCTGGGGGCGCTGGCGTTCGTGA ACCGGCCGCTGCAGTATGCGAGCTTCGTGGCGGGGTGGCGGCTCACCACCTGGGCGAGCGCGGTTTCGCTGGTCGTGCAG GGCGCCATGCTGACGTGGCTCGCGTTCTGGGTGCCTGCGTTCTTCTTCCACCGGTACTCGCCCAAGCTCATCGTGGTGGT GGCGCTGGGCATGGCCGTGGCCGTGGTCCTGGCCGTGGCGGCGATCTTCCGCAGGCTGCCGCGGGACAACGCGGTGACGG GCGAGACCATCGCCCAAGCCGATGCGCCGCAGCTCTGGCAGCGGGTGCGCGCCCTGGCCGCGCGCCTGGGCACGGAGCCC CCGCGCCACATCGTGGCGGGCATAGACGCCAACTTCTTCGTGACCGAGGCGCCGCTGACCGTGCAGGGGCGCGAGCTCAC GGGCCGAACGCTGTTCGTCAGCCTTCCGCTGCTGCGGGTGCTGGACCAGCACGAGGCCGATGCGGTGCTGGCGCACGAAC TGGCCCACCTGGGCGGTGGCGATACGCGCAGCAGTGCCCGCCTGGGCCCCAAGCTGGTGCAGTTCGACCACTACCTGAAC GCGGTGCGCGGGGGCGGCCTGTCGGCGCTGGCGTCGCCGCTGCTCACCCTCTATCGCACGATCTTCGGGATCGCCCTCGC GCGGGACAGCCGCGAGCGCGAATTCCGCGCCGACCGCACGGCCGCGGACGCGGTGTCGCCCGAGGGCATCGCCCGGTCGC TCGTGAAGATCGCCGCCTACGCGCAGTACCGGCACCGCATCGAGGAAGACCTGTTCGGCCGGGACCAGCGCCACGGCCAG GCGCTCGGCATCGCGGGCTTCATCGCGCAGGGGCTCGGGCCCTATGCGGAGTCGCCCGGTTTCGCCGAGGCCATGCGCTC GGCCCACGTGCCGCATCCGTTCGATTCGCATCCGCCCACGCCCGAACGCATCGGGCGCGTGGGGGTGTCGCTGGCCGAAG CCGACTATGGCGCCATCGTGCGGCGCGCGCCGGCCTCCACCTGGGCGCAGGAGATCCTCACGGCGGAGGCGATCGAGTCG CGGCTGTGGTCGGAGTACGAGGCGGCTTTCGCGGAAAACCACGAACGCAGCCTGGCCTACCGCTATGAGCCCGCGAACGA TGCGGAACGGGCGATCGTGCTGCAGTACTTTCCCCCGCAGTCGTTCGAGGTCAAGGGTGGCCAGATGGTGGAGGTGAGCA TCGACGGCATCCGGGCCACGCGGGGCGACCAGCACGTGCCCTGGGATGCCGTGAAGGCGCTGCAGTTCAGCGAGAGCGCG TTCACGAACGCGCTGGTGGTCACCCACCCGGAAAGGCGCCTGCTGCGGCACCGCACGACGAATATCGCGCTGGCGGGCAT GCGGTCCGAGAAGGACCGGTTCAAGGCCGTGGTGAATGCCTACTGGCAGCGCCACCAGGTGATGCGCATGCACCAGGCCG AAGGCTGA
Upstream 100 bases:
>100_bases CGGGCCGGCTGCGAATAATTCTCGGCTCCGCCACCGCGGGCCGCCCGGAGGGGGCCGGCCGCGCCGGTGATGAAAACCAT TCCAACAAAGCGCAGTGCCG
Downstream 100 bases:
>100_bases GTTCGGCTGCGTCCCGCCACGGCCCCGCGCGGGCCGGACTGCAGACCGACTGGCCTGCCCGCGTGCCTGCCTCAGGCCGA GGTGCCCGGCACGTACTCCG
Product: peptidase M48, Ste24p
Products: NA
Alternate protein names: Oligopeptide ABC Transporter
Number of amino acids: Translated: 615; Mature: 615
Protein sequence:
>615_residues MNASSEFRKGLLKVALLTLVSLFLVPAATMLFARHVQGAEDARFLADIERRIDAEVSMPAAEKEAQRTFFRSHPPSGACH DAHPRVAAVREGLCGRFSPAWQFDLAHRLSAATLLGGAALLIAVLGLGALAFVNRPLQYASFVAGWRLTTWASAVSLVVQ GAMLTWLAFWVPAFFFHRYSPKLIVVVALGMAVAVVLAVAAIFRRLPRDNAVTGETIAQADAPQLWQRVRALAARLGTEP PRHIVAGIDANFFVTEAPLTVQGRELTGRTLFVSLPLLRVLDQHEADAVLAHELAHLGGGDTRSSARLGPKLVQFDHYLN AVRGGGLSALASPLLTLYRTIFGIALARDSREREFRADRTAADAVSPEGIARSLVKIAAYAQYRHRIEEDLFGRDQRHGQ ALGIAGFIAQGLGPYAESPGFAEAMRSAHVPHPFDSHPPTPERIGRVGVSLAEADYGAIVRRAPASTWAQEILTAEAIES RLWSEYEAAFAENHERSLAYRYEPANDAERAIVLQYFPPQSFEVKGGQMVEVSIDGIRATRGDQHVPWDAVKALQFSESA FTNALVVTHPERRLLRHRTTNIALAGMRSEKDRFKAVVNAYWQRHQVMRMHQAEG
Sequences:
>Translated_615_residues MNASSEFRKGLLKVALLTLVSLFLVPAATMLFARHVQGAEDARFLADIERRIDAEVSMPAAEKEAQRTFFRSHPPSGACH DAHPRVAAVREGLCGRFSPAWQFDLAHRLSAATLLGGAALLIAVLGLGALAFVNRPLQYASFVAGWRLTTWASAVSLVVQ GAMLTWLAFWVPAFFFHRYSPKLIVVVALGMAVAVVLAVAAIFRRLPRDNAVTGETIAQADAPQLWQRVRALAARLGTEP PRHIVAGIDANFFVTEAPLTVQGRELTGRTLFVSLPLLRVLDQHEADAVLAHELAHLGGGDTRSSARLGPKLVQFDHYLN AVRGGGLSALASPLLTLYRTIFGIALARDSREREFRADRTAADAVSPEGIARSLVKIAAYAQYRHRIEEDLFGRDQRHGQ ALGIAGFIAQGLGPYAESPGFAEAMRSAHVPHPFDSHPPTPERIGRVGVSLAEADYGAIVRRAPASTWAQEILTAEAIES RLWSEYEAAFAENHERSLAYRYEPANDAERAIVLQYFPPQSFEVKGGQMVEVSIDGIRATRGDQHVPWDAVKALQFSESA FTNALVVTHPERRLLRHRTTNIALAGMRSEKDRFKAVVNAYWQRHQVMRMHQAEG >Mature_615_residues MNASSEFRKGLLKVALLTLVSLFLVPAATMLFARHVQGAEDARFLADIERRIDAEVSMPAAEKEAQRTFFRSHPPSGACH DAHPRVAAVREGLCGRFSPAWQFDLAHRLSAATLLGGAALLIAVLGLGALAFVNRPLQYASFVAGWRLTTWASAVSLVVQ GAMLTWLAFWVPAFFFHRYSPKLIVVVALGMAVAVVLAVAAIFRRLPRDNAVTGETIAQADAPQLWQRVRALAARLGTEP PRHIVAGIDANFFVTEAPLTVQGRELTGRTLFVSLPLLRVLDQHEADAVLAHELAHLGGGDTRSSARLGPKLVQFDHYLN AVRGGGLSALASPLLTLYRTIFGIALARDSREREFRADRTAADAVSPEGIARSLVKIAAYAQYRHRIEEDLFGRDQRHGQ ALGIAGFIAQGLGPYAESPGFAEAMRSAHVPHPFDSHPPTPERIGRVGVSLAEADYGAIVRRAPASTWAQEILTAEAIES RLWSEYEAAFAENHERSLAYRYEPANDAERAIVLQYFPPQSFEVKGGQMVEVSIDGIRATRGDQHVPWDAVKALQFSESA FTNALVVTHPERRLLRHRTTNIALAGMRSEKDRFKAVVNAYWQRHQVMRMHQAEG
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67518; Mature: 67518
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS00142 ZINC_PROTEASE ; PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASSEFRKGLLKVALLTLVSLFLVPAATMLFARHVQGAEDARFLADIERRIDAEVSMPA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC AEKEAQRTFFRSHPPSGACHDAHPRVAAVREGLCGRFSPAWQFDLAHRLSAATLLGGAAL HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LIAVLGLGALAFVNRPLQYASFVAGWRLTTWASAVSLVVQGAMLTWLAFWVPAFFFHRYS HHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PKLIVVVALGMAVAVVLAVAAIFRRLPRDNAVTGETIAQADAPQLWQRVRALAARLGTEP CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCC PRHIVAGIDANFFVTEAPLTVQGRELTGRTLFVSLPLLRVLDQHEADAVLAHELAHLGGG CHHEEECCCCCEEEECCCCEEECCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHCCCC DTRSSARLGPKLVQFDHYLNAVRGGGLSALASPLLTLYRTIFGIALARDSREREFRADRT CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AADAVSPEGIARSLVKIAAYAQYRHRIEEDLFGRDQRHGQALGIAGFIAQGLGPYAESPG HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCCCCCCCCC FAEAMRSAHVPHPFDSHPPTPERIGRVGVSLAEADYGAIVRRAPASTWAQEILTAEAIES HHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RLWSEYEAAFAENHERSLAYRYEPANDAERAIVLQYFPPQSFEVKGGQMVEVSIDGIRAT HHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCEEECCCEEEEEEECCEEEC RGDQHVPWDAVKALQFSESAFTNALVVTHPERRLLRHRTTNIALAGMRSEKDRFKAVVNA CCCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCEEEECCCCHHHHHHHHHHH YWQRHQVMRMHQAEG HHHHHHHHHHHHCCC >Mature Secondary Structure MNASSEFRKGLLKVALLTLVSLFLVPAATMLFARHVQGAEDARFLADIERRIDAEVSMPA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC AEKEAQRTFFRSHPPSGACHDAHPRVAAVREGLCGRFSPAWQFDLAHRLSAATLLGGAAL HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LIAVLGLGALAFVNRPLQYASFVAGWRLTTWASAVSLVVQGAMLTWLAFWVPAFFFHRYS HHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PKLIVVVALGMAVAVVLAVAAIFRRLPRDNAVTGETIAQADAPQLWQRVRALAARLGTEP CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCC PRHIVAGIDANFFVTEAPLTVQGRELTGRTLFVSLPLLRVLDQHEADAVLAHELAHLGGG CHHEEECCCCCEEEECCCCEEECCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHCCCC DTRSSARLGPKLVQFDHYLNAVRGGGLSALASPLLTLYRTIFGIALARDSREREFRADRT CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH AADAVSPEGIARSLVKIAAYAQYRHRIEEDLFGRDQRHGQALGIAGFIAQGLGPYAESPG HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCCCCCCCCC FAEAMRSAHVPHPFDSHPPTPERIGRVGVSLAEADYGAIVRRAPASTWAQEILTAEAIES HHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RLWSEYEAAFAENHERSLAYRYEPANDAERAIVLQYFPPQSFEVKGGQMVEVSIDGIRAT HHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCEEECCCEEEEEEECCEEEC RGDQHVPWDAVKALQFSESAFTNALVVTHPERRLLRHRTTNIALAGMRSEKDRFKAVVNA CCCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCEEEECCCCHHHHHHHHHHH YWQRHQVMRMHQAEG HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA