Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120610673

Identifier: 120610673

GI number: 120610673

Start: 2163553

End: 2165400

Strand: Direct

Name: 120610673

Synonym: Aave_1993

Alternate gene names: NA

Gene position: 2163553-2165400 (Clockwise)

Preceding gene: 120610669

Following gene: 120610675

Centisome position: 40.42

GC content: 70.67

Gene sequence:

>1848_bases
ATGAACGCATCTTCCGAATTCCGCAAGGGCCTCCTGAAAGTGGCCTTGCTCACCCTGGTTTCCCTCTTTCTGGTTCCCGC
CGCGACGATGCTGTTCGCGCGGCACGTGCAGGGCGCGGAAGATGCCCGGTTCCTGGCGGACATCGAGCGCCGCATCGATG
CCGAGGTGTCGATGCCCGCGGCCGAGAAGGAGGCCCAGCGCACGTTCTTCCGCAGCCATCCGCCTTCCGGCGCCTGCCAT
GACGCGCATCCGCGCGTCGCCGCGGTGCGCGAGGGCCTGTGCGGCCGTTTCTCGCCCGCCTGGCAGTTCGATCTGGCCCA
CCGGCTGTCGGCCGCGACGCTGCTGGGCGGCGCCGCGCTGCTGATCGCGGTGCTCGGGCTGGGGGCGCTGGCGTTCGTGA
ACCGGCCGCTGCAGTATGCGAGCTTCGTGGCGGGGTGGCGGCTCACCACCTGGGCGAGCGCGGTTTCGCTGGTCGTGCAG
GGCGCCATGCTGACGTGGCTCGCGTTCTGGGTGCCTGCGTTCTTCTTCCACCGGTACTCGCCCAAGCTCATCGTGGTGGT
GGCGCTGGGCATGGCCGTGGCCGTGGTCCTGGCCGTGGCGGCGATCTTCCGCAGGCTGCCGCGGGACAACGCGGTGACGG
GCGAGACCATCGCCCAAGCCGATGCGCCGCAGCTCTGGCAGCGGGTGCGCGCCCTGGCCGCGCGCCTGGGCACGGAGCCC
CCGCGCCACATCGTGGCGGGCATAGACGCCAACTTCTTCGTGACCGAGGCGCCGCTGACCGTGCAGGGGCGCGAGCTCAC
GGGCCGAACGCTGTTCGTCAGCCTTCCGCTGCTGCGGGTGCTGGACCAGCACGAGGCCGATGCGGTGCTGGCGCACGAAC
TGGCCCACCTGGGCGGTGGCGATACGCGCAGCAGTGCCCGCCTGGGCCCCAAGCTGGTGCAGTTCGACCACTACCTGAAC
GCGGTGCGCGGGGGCGGCCTGTCGGCGCTGGCGTCGCCGCTGCTCACCCTCTATCGCACGATCTTCGGGATCGCCCTCGC
GCGGGACAGCCGCGAGCGCGAATTCCGCGCCGACCGCACGGCCGCGGACGCGGTGTCGCCCGAGGGCATCGCCCGGTCGC
TCGTGAAGATCGCCGCCTACGCGCAGTACCGGCACCGCATCGAGGAAGACCTGTTCGGCCGGGACCAGCGCCACGGCCAG
GCGCTCGGCATCGCGGGCTTCATCGCGCAGGGGCTCGGGCCCTATGCGGAGTCGCCCGGTTTCGCCGAGGCCATGCGCTC
GGCCCACGTGCCGCATCCGTTCGATTCGCATCCGCCCACGCCCGAACGCATCGGGCGCGTGGGGGTGTCGCTGGCCGAAG
CCGACTATGGCGCCATCGTGCGGCGCGCGCCGGCCTCCACCTGGGCGCAGGAGATCCTCACGGCGGAGGCGATCGAGTCG
CGGCTGTGGTCGGAGTACGAGGCGGCTTTCGCGGAAAACCACGAACGCAGCCTGGCCTACCGCTATGAGCCCGCGAACGA
TGCGGAACGGGCGATCGTGCTGCAGTACTTTCCCCCGCAGTCGTTCGAGGTCAAGGGTGGCCAGATGGTGGAGGTGAGCA
TCGACGGCATCCGGGCCACGCGGGGCGACCAGCACGTGCCCTGGGATGCCGTGAAGGCGCTGCAGTTCAGCGAGAGCGCG
TTCACGAACGCGCTGGTGGTCACCCACCCGGAAAGGCGCCTGCTGCGGCACCGCACGACGAATATCGCGCTGGCGGGCAT
GCGGTCCGAGAAGGACCGGTTCAAGGCCGTGGTGAATGCCTACTGGCAGCGCCACCAGGTGATGCGCATGCACCAGGCCG
AAGGCTGA

Upstream 100 bases:

>100_bases
CGGGCCGGCTGCGAATAATTCTCGGCTCCGCCACCGCGGGCCGCCCGGAGGGGGCCGGCCGCGCCGGTGATGAAAACCAT
TCCAACAAAGCGCAGTGCCG

Downstream 100 bases:

>100_bases
GTTCGGCTGCGTCCCGCCACGGCCCCGCGCGGGCCGGACTGCAGACCGACTGGCCTGCCCGCGTGCCTGCCTCAGGCCGA
GGTGCCCGGCACGTACTCCG

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: Oligopeptide ABC Transporter

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MNASSEFRKGLLKVALLTLVSLFLVPAATMLFARHVQGAEDARFLADIERRIDAEVSMPAAEKEAQRTFFRSHPPSGACH
DAHPRVAAVREGLCGRFSPAWQFDLAHRLSAATLLGGAALLIAVLGLGALAFVNRPLQYASFVAGWRLTTWASAVSLVVQ
GAMLTWLAFWVPAFFFHRYSPKLIVVVALGMAVAVVLAVAAIFRRLPRDNAVTGETIAQADAPQLWQRVRALAARLGTEP
PRHIVAGIDANFFVTEAPLTVQGRELTGRTLFVSLPLLRVLDQHEADAVLAHELAHLGGGDTRSSARLGPKLVQFDHYLN
AVRGGGLSALASPLLTLYRTIFGIALARDSREREFRADRTAADAVSPEGIARSLVKIAAYAQYRHRIEEDLFGRDQRHGQ
ALGIAGFIAQGLGPYAESPGFAEAMRSAHVPHPFDSHPPTPERIGRVGVSLAEADYGAIVRRAPASTWAQEILTAEAIES
RLWSEYEAAFAENHERSLAYRYEPANDAERAIVLQYFPPQSFEVKGGQMVEVSIDGIRATRGDQHVPWDAVKALQFSESA
FTNALVVTHPERRLLRHRTTNIALAGMRSEKDRFKAVVNAYWQRHQVMRMHQAEG

Sequences:

>Translated_615_residues
MNASSEFRKGLLKVALLTLVSLFLVPAATMLFARHVQGAEDARFLADIERRIDAEVSMPAAEKEAQRTFFRSHPPSGACH
DAHPRVAAVREGLCGRFSPAWQFDLAHRLSAATLLGGAALLIAVLGLGALAFVNRPLQYASFVAGWRLTTWASAVSLVVQ
GAMLTWLAFWVPAFFFHRYSPKLIVVVALGMAVAVVLAVAAIFRRLPRDNAVTGETIAQADAPQLWQRVRALAARLGTEP
PRHIVAGIDANFFVTEAPLTVQGRELTGRTLFVSLPLLRVLDQHEADAVLAHELAHLGGGDTRSSARLGPKLVQFDHYLN
AVRGGGLSALASPLLTLYRTIFGIALARDSREREFRADRTAADAVSPEGIARSLVKIAAYAQYRHRIEEDLFGRDQRHGQ
ALGIAGFIAQGLGPYAESPGFAEAMRSAHVPHPFDSHPPTPERIGRVGVSLAEADYGAIVRRAPASTWAQEILTAEAIES
RLWSEYEAAFAENHERSLAYRYEPANDAERAIVLQYFPPQSFEVKGGQMVEVSIDGIRATRGDQHVPWDAVKALQFSESA
FTNALVVTHPERRLLRHRTTNIALAGMRSEKDRFKAVVNAYWQRHQVMRMHQAEG
>Mature_615_residues
MNASSEFRKGLLKVALLTLVSLFLVPAATMLFARHVQGAEDARFLADIERRIDAEVSMPAAEKEAQRTFFRSHPPSGACH
DAHPRVAAVREGLCGRFSPAWQFDLAHRLSAATLLGGAALLIAVLGLGALAFVNRPLQYASFVAGWRLTTWASAVSLVVQ
GAMLTWLAFWVPAFFFHRYSPKLIVVVALGMAVAVVLAVAAIFRRLPRDNAVTGETIAQADAPQLWQRVRALAARLGTEP
PRHIVAGIDANFFVTEAPLTVQGRELTGRTLFVSLPLLRVLDQHEADAVLAHELAHLGGGDTRSSARLGPKLVQFDHYLN
AVRGGGLSALASPLLTLYRTIFGIALARDSREREFRADRTAADAVSPEGIARSLVKIAAYAQYRHRIEEDLFGRDQRHGQ
ALGIAGFIAQGLGPYAESPGFAEAMRSAHVPHPFDSHPPTPERIGRVGVSLAEADYGAIVRRAPASTWAQEILTAEAIES
RLWSEYEAAFAENHERSLAYRYEPANDAERAIVLQYFPPQSFEVKGGQMVEVSIDGIRATRGDQHVPWDAVKALQFSESA
FTNALVVTHPERRLLRHRTTNIALAGMRSEKDRFKAVVNAYWQRHQVMRMHQAEG

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67518; Mature: 67518

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS00142 ZINC_PROTEASE ; PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASSEFRKGLLKVALLTLVSLFLVPAATMLFARHVQGAEDARFLADIERRIDAEVSMPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
AEKEAQRTFFRSHPPSGACHDAHPRVAAVREGLCGRFSPAWQFDLAHRLSAATLLGGAAL
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LIAVLGLGALAFVNRPLQYASFVAGWRLTTWASAVSLVVQGAMLTWLAFWVPAFFFHRYS
HHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PKLIVVVALGMAVAVVLAVAAIFRRLPRDNAVTGETIAQADAPQLWQRVRALAARLGTEP
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCC
PRHIVAGIDANFFVTEAPLTVQGRELTGRTLFVSLPLLRVLDQHEADAVLAHELAHLGGG
CHHEEECCCCCEEEECCCCEEECCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHCCCC
DTRSSARLGPKLVQFDHYLNAVRGGGLSALASPLLTLYRTIFGIALARDSREREFRADRT
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AADAVSPEGIARSLVKIAAYAQYRHRIEEDLFGRDQRHGQALGIAGFIAQGLGPYAESPG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCCCCCCCCC
FAEAMRSAHVPHPFDSHPPTPERIGRVGVSLAEADYGAIVRRAPASTWAQEILTAEAIES
HHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RLWSEYEAAFAENHERSLAYRYEPANDAERAIVLQYFPPQSFEVKGGQMVEVSIDGIRAT
HHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCEEECCCEEEEEEECCEEEC
RGDQHVPWDAVKALQFSESAFTNALVVTHPERRLLRHRTTNIALAGMRSEKDRFKAVVNA
CCCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCEEEECCCCHHHHHHHHHHH
YWQRHQVMRMHQAEG
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MNASSEFRKGLLKVALLTLVSLFLVPAATMLFARHVQGAEDARFLADIERRIDAEVSMPA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
AEKEAQRTFFRSHPPSGACHDAHPRVAAVREGLCGRFSPAWQFDLAHRLSAATLLGGAAL
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LIAVLGLGALAFVNRPLQYASFVAGWRLTTWASAVSLVVQGAMLTWLAFWVPAFFFHRYS
HHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PKLIVVVALGMAVAVVLAVAAIFRRLPRDNAVTGETIAQADAPQLWQRVRALAARLGTEP
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCC
PRHIVAGIDANFFVTEAPLTVQGRELTGRTLFVSLPLLRVLDQHEADAVLAHELAHLGGG
CHHEEECCCCCEEEECCCCEEECCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHCCCC
DTRSSARLGPKLVQFDHYLNAVRGGGLSALASPLLTLYRTIFGIALARDSREREFRADRT
CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
AADAVSPEGIARSLVKIAAYAQYRHRIEEDLFGRDQRHGQALGIAGFIAQGLGPYAESPG
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCCCCCCCCC
FAEAMRSAHVPHPFDSHPPTPERIGRVGVSLAEADYGAIVRRAPASTWAQEILTAEAIES
HHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RLWSEYEAAFAENHERSLAYRYEPANDAERAIVLQYFPPQSFEVKGGQMVEVSIDGIRAT
HHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCCEEECCCEEEEEEECCEEEC
RGDQHVPWDAVKALQFSESAFTNALVVTHPERRLLRHRTTNIALAGMRSEKDRFKAVVNA
CCCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCCCEEEECCCCHHHHHHHHHHH
YWQRHQVMRMHQAEG
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA