| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610423
Identifier: 120610423
GI number: 120610423
Start: 1901919
End: 1903928
Strand: Reverse
Name: 120610423
Synonym: Aave_1740
Alternate gene names: NA
Gene position: 1903928-1901919 (Counterclockwise)
Preceding gene: 120610424
Following gene: 120610422
Centisome position: 35.57
GC content: 71.94
Gene sequence:
>2010_bases ATGAAGCGTGACGCCTTCACCCTCCCGCTCGCATTCCCCGGCGAGCTGATCATCGACAACTTCGCGGGCGGCGGCGGCAC GTCAACCGGGCTGGAGGCCGCATTCGGCAGGCCCGTGGACATCGCCATCAACCACGACCCCGAGGCGCTGGCCATGCACG CCATCAACCACCCGCACACCCAGCACCTGTGCGAGAGCGTGTGGGATGTGGACCCGATCGCCGTGACCGGGAACCAGCCG GTGGGCCTCGTGTGGCTGTCGCCGGACTGCAAGCACTTCAGCAAGGCCAAGGGCGGCACGCCGGTGGCGAAGCACATCCG CGGCCTGGCCTGGGTGGGCATGCGCTGGGTGGCGCTCTGCAAGCCCCGCGTGCTCATGCTCGAGAACGTCGAGGAGTTCC AGACCTGGGGCCCGCTGCTGGTGGGAGCCGACGGCACCGCCCGCCCGGACCCCGCGCGCAAGGGTAAGACGTTCCAGAGC TTCGTGCGGCAGCTGCGCGCGCACGGGTACGCAGTGGACTGGCGCGAGCTGCGCGCCTGCGACAACGGCGCGCCGACGAT CCGCAAGCGCCTGTTCTTGATCGCGCGCCGCGACGGCCTGCCGATCCAGTGGCCCGAGCAGACGCACGCCGCGCCCACCG ATCGCCGCGTGCTCGCCGGAAAGCTGGCGCCCTACCGCACGGCGGCCGAGTGCATCGACTTCAGCCTGGAGGCGGCCAGC ATCTTCGACCGCCCGCGGCCGCTGGCCATCAACACCCAGCGCCGCGTCGCTAAGGGCCTGTTCCGGCACGTCCTGACCAG CGCGGCCCCCTTCATCGTGGGCGTGGGCGGCAGGATGGGCCAGAGCCCCGCGCGCAGCGTGCACACGCCCGCGCAGACCA TCACGGCCAAGGCGGACAGCTGCATCGCGCAGCCGGTGCTGACGCCCTACATGGTCAATACCCGCAACGGCGAGCGCGCC GGCCAGCAGCCCCGCGTGCGCAGCGCCCAGGCGCCGTACTGGACGGTGACGGGCCTAGGATCACAGGGCGCGCTGGCGGC GCCGGTGATCGCCCCGCTACGCGGCACCAGCGAGCAGCACCTGCAGTGCGACGATGCCCGGGAGCCGCTTTCCACCGTGT CGGCCGGCGGCACGCACCACGCCCTGGCCGGCGCCGTGCTGGCGGCCGCGATCGTCACCAACACGACCGGGCACCCGGGC GCGACGGCGGACACGCCGCTGGCGACCATCACCACCGGTGGCCACCATGCCATGGCGGCGATGCACATTACGAAGTTCAA CACGGGCTCCGTGGGTTCCGGCCTGGACGAGCCCCTGCGCACCGTCACGGCCGGAGGAACGCCCAGCCGCCCCAGCACCG GTATCCAGATGGGCATGGTGTCCGCGTTCCTGGAGCAGGCCAACGGCGGGTTCTACGACGGCGACGGCCGGCCCGTGGGA GCCCCGGCCAGCACCATCACCAGCAGCGGCGCGCAGCAGCGGCTGGTGACGGCCTACCTGGTCAAGTACTACAGCGAAGG CGGCCAGGACAGCGCCTGCGGCGCGCCGATGCACACCGTGCCGACCAAGGCCCGAATGGGCCTCGTGCAGACCGTGCAGG TGCCGGCCGACTGCCTGGCGCCGGAGCACCAGGCCCGCGCGCGGCAGTGCGCCGAGCTGCTGCACACGCACCTGCCCGAG CAGTTTCCCGACCCGGCCGGCCTGGTGCTGATGCAACACGCTGGCCAGTGGTGGGTGCTGGTGGACATCACGCTGCGCAT GCTCAAGCCGGTGGAGCTGTTCCGCGCCCAGGGCTTCCCCGAGGACTACGTGATCCACGAGATCCCAGACCCTGCCCTGC TCTTCGCGGGCGGGAAGCAGGCGGCACATCCGCTCGAGGTGCCGCGCATCCCGCTCACCGCCACGGCGCAGGTCCGCATG TGCGGCAACAGCGTCAGCCCGCCGCAGGCCGAGGCCCTGGTCCGCGCCAACTTCGGACACGAGACGGCCTGGATGGCCGT CGCCGCATGA
Upstream 100 bases:
>100_bases CACCAAATCTGAAAAACAGGCTGCGGCACGATTTCAGACTTGACAACCCACTGATACCACCTGGCCCGCCGCGAGCGGGC TTTTCCTTTTCGGAGCCCGC
Downstream 100 bases:
>100_bases CCCCGCCCCACAGGGCACCACAACACAGGAGGCCGCAATGGCTGAATACCTCATCGCCCACGTCGGGCACACCGGAAAGT GGGACGAGCATATTTGCTGG
Product: C-5 cytosine-specific DNA methylase
Products: NA
Alternate protein names: Site-Specific DNA Methylase; DNA Cytosine Methyltransferase; Methylase; C-5 Cytosine-Specific DNA Methylase Family Protein; DNA-Methyltransferase; DNA-Cytosine Methyltransferase; Cytosine-Specific Methylase; DNA Methylase; C-5 Cytosine-Specific DNA Methylase Superfamily; Prophage LambdaSo Type II DNA Methyltransferase; Type II Restriction- System DNA Cytosine-Specific Methylase; Cytosine Specific DNA Methyltransferase; Prophage DNA Cytosine Methylase; DNA Methyltransferase; DNA Cytosine Methyltransferase Family Protein
Number of amino acids: Translated: 669; Mature: 669
Protein sequence:
>669_residues MKRDAFTLPLAFPGELIIDNFAGGGGTSTGLEAAFGRPVDIAINHDPEALAMHAINHPHTQHLCESVWDVDPIAVTGNQP VGLVWLSPDCKHFSKAKGGTPVAKHIRGLAWVGMRWVALCKPRVLMLENVEEFQTWGPLLVGADGTARPDPARKGKTFQS FVRQLRAHGYAVDWRELRACDNGAPTIRKRLFLIARRDGLPIQWPEQTHAAPTDRRVLAGKLAPYRTAAECIDFSLEAAS IFDRPRPLAINTQRRVAKGLFRHVLTSAAPFIVGVGGRMGQSPARSVHTPAQTITAKADSCIAQPVLTPYMVNTRNGERA GQQPRVRSAQAPYWTVTGLGSQGALAAPVIAPLRGTSEQHLQCDDAREPLSTVSAGGTHHALAGAVLAAAIVTNTTGHPG ATADTPLATITTGGHHAMAAMHITKFNTGSVGSGLDEPLRTVTAGGTPSRPSTGIQMGMVSAFLEQANGGFYDGDGRPVG APASTITSSGAQQRLVTAYLVKYYSEGGQDSACGAPMHTVPTKARMGLVQTVQVPADCLAPEHQARARQCAELLHTHLPE QFPDPAGLVLMQHAGQWWVLVDITLRMLKPVELFRAQGFPEDYVIHEIPDPALLFAGGKQAAHPLEVPRIPLTATAQVRM CGNSVSPPQAEALVRANFGHETAWMAVAA
Sequences:
>Translated_669_residues MKRDAFTLPLAFPGELIIDNFAGGGGTSTGLEAAFGRPVDIAINHDPEALAMHAINHPHTQHLCESVWDVDPIAVTGNQP VGLVWLSPDCKHFSKAKGGTPVAKHIRGLAWVGMRWVALCKPRVLMLENVEEFQTWGPLLVGADGTARPDPARKGKTFQS FVRQLRAHGYAVDWRELRACDNGAPTIRKRLFLIARRDGLPIQWPEQTHAAPTDRRVLAGKLAPYRTAAECIDFSLEAAS IFDRPRPLAINTQRRVAKGLFRHVLTSAAPFIVGVGGRMGQSPARSVHTPAQTITAKADSCIAQPVLTPYMVNTRNGERA GQQPRVRSAQAPYWTVTGLGSQGALAAPVIAPLRGTSEQHLQCDDAREPLSTVSAGGTHHALAGAVLAAAIVTNTTGHPG ATADTPLATITTGGHHAMAAMHITKFNTGSVGSGLDEPLRTVTAGGTPSRPSTGIQMGMVSAFLEQANGGFYDGDGRPVG APASTITSSGAQQRLVTAYLVKYYSEGGQDSACGAPMHTVPTKARMGLVQTVQVPADCLAPEHQARARQCAELLHTHLPE QFPDPAGLVLMQHAGQWWVLVDITLRMLKPVELFRAQGFPEDYVIHEIPDPALLFAGGKQAAHPLEVPRIPLTATAQVRM CGNSVSPPQAEALVRANFGHETAWMAVAA >Mature_669_residues MKRDAFTLPLAFPGELIIDNFAGGGGTSTGLEAAFGRPVDIAINHDPEALAMHAINHPHTQHLCESVWDVDPIAVTGNQP VGLVWLSPDCKHFSKAKGGTPVAKHIRGLAWVGMRWVALCKPRVLMLENVEEFQTWGPLLVGADGTARPDPARKGKTFQS FVRQLRAHGYAVDWRELRACDNGAPTIRKRLFLIARRDGLPIQWPEQTHAAPTDRRVLAGKLAPYRTAAECIDFSLEAAS IFDRPRPLAINTQRRVAKGLFRHVLTSAAPFIVGVGGRMGQSPARSVHTPAQTITAKADSCIAQPVLTPYMVNTRNGERA GQQPRVRSAQAPYWTVTGLGSQGALAAPVIAPLRGTSEQHLQCDDAREPLSTVSAGGTHHALAGAVLAAAIVTNTTGHPG ATADTPLATITTGGHHAMAAMHITKFNTGSVGSGLDEPLRTVTAGGTPSRPSTGIQMGMVSAFLEQANGGFYDGDGRPVG APASTITSSGAQQRLVTAYLVKYYSEGGQDSACGAPMHTVPTKARMGLVQTVQVPADCLAPEHQARARQCAELLHTHLPE QFPDPAGLVLMQHAGQWWVLVDITLRMLKPVELFRAQGFPEDYVIHEIPDPALLFAGGKQAAHPLEVPRIPLTATAQVRM CGNSVSPPQAEALVRANFGHETAWMAVAA
Specific function: Unknown
COG id: COG0270
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71353; Mature: 71353
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRDAFTLPLAFPGELIIDNFAGGGGTSTGLEAAFGRPVDIAINHDPEALAMHAINHPHT CCCCCEEEEECCCCCEEEECCCCCCCCCCCCHHHCCCCEEEEECCCCHHHHHHHCCCCHH QHLCESVWDVDPIAVTGNQPVGLVWLSPDCKHFSKAKGGTPVAKHIRGLAWVGMRWVALC HHHHHHHCCCCCEEEECCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC KPRVLMLENVEEFQTWGPLLVGADGTARPDPARKGKTFQSFVRQLRAHGYAVDWRELRAC CCCEEECCCHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECHHHHHHC DNGAPTIRKRLFLIARRDGLPIQWPEQTHAAPTDRRVLAGKLAPYRTAAECIDFSLEAAS CCCCHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCHHHH IFDRPRPLAINTQRRVAKGLFRHVLTSAAPFIVGVGGRMGQSPARSVHTPAQTITAKADS HHCCCCCEEECHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHCCCHHHHHHHHHH CIAQPVLTPYMVNTRNGERAGQQPRVRSAQAPYWTVTGLGSQGALAAPVIAPLRGTSEQH HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCHHH LQCDDAREPLSTVSAGGTHHALAGAVLAAAIVTNTTGHPGATADTPLATITTGGHHAMAA CCCCCHHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEE MHITKFNTGSVGSGLDEPLRTVTAGGTPSRPSTGIQMGMVSAFLEQANGGFYDGDGRPVG EEEEECCCCCCCCCCHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCC APASTITSSGAQQRLVTAYLVKYYSEGGQDSACGAPMHTVPTKARMGLVQTVQVPADCLA CCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCHHHEEECCHHHCC PEHQARARQCAELLHTHLPEQFPDPAGLVLMQHAGQWWVLVDITLRMLKPVELFRAQGFP CHHHHHHHHHHHHHHHHCHHHCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCC EDYVIHEIPDPALLFAGGKQAAHPLEVPRIPLTATAQVRMCGNSVSPPQAEALVRANFGH CCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHEEECCCC ETAWMAVAA CEEEEEEEC >Mature Secondary Structure MKRDAFTLPLAFPGELIIDNFAGGGGTSTGLEAAFGRPVDIAINHDPEALAMHAINHPHT CCCCCEEEEECCCCCEEEECCCCCCCCCCCCHHHCCCCEEEEECCCCHHHHHHHCCCCHH QHLCESVWDVDPIAVTGNQPVGLVWLSPDCKHFSKAKGGTPVAKHIRGLAWVGMRWVALC HHHHHHHCCCCCEEEECCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC KPRVLMLENVEEFQTWGPLLVGADGTARPDPARKGKTFQSFVRQLRAHGYAVDWRELRAC CCCEEECCCHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECHHHHHHC DNGAPTIRKRLFLIARRDGLPIQWPEQTHAAPTDRRVLAGKLAPYRTAAECIDFSLEAAS CCCCHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHCCCHHHH IFDRPRPLAINTQRRVAKGLFRHVLTSAAPFIVGVGGRMGQSPARSVHTPAQTITAKADS HHCCCCCEEECHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHCCCHHHHHHHHHH CIAQPVLTPYMVNTRNGERAGQQPRVRSAQAPYWTVTGLGSQGALAAPVIAPLRGTSEQH HHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCHHH LQCDDAREPLSTVSAGGTHHALAGAVLAAAIVTNTTGHPGATADTPLATITTGGHHAMAA CCCCCHHCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEE MHITKFNTGSVGSGLDEPLRTVTAGGTPSRPSTGIQMGMVSAFLEQANGGFYDGDGRPVG EEEEECCCCCCCCCCHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCC APASTITSSGAQQRLVTAYLVKYYSEGGQDSACGAPMHTVPTKARMGLVQTVQVPADCLA CCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCHHHEEECCHHHCC PEHQARARQCAELLHTHLPEQFPDPAGLVLMQHAGQWWVLVDITLRMLKPVELFRAQGFP CHHHHHHHHHHHHHHHHCHHHCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCC EDYVIHEIPDPALLFAGGKQAAHPLEVPRIPLTATAQVRMCGNSVSPPQAEALVRANFGH CCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHEEECCCC ETAWMAVAA CEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA