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The map label for this gene is yfdR [H]

Identifier: 120610353

GI number: 120610353

Start: 1830952

End: 1831746

Strand: Reverse

Name: yfdR [H]

Synonym: Aave_1670

Alternate gene names: 120610353

Gene position: 1831746-1830952 (Counterclockwise)

Preceding gene: 120610354

Following gene: 120610352

Centisome position: 34.22

GC content: 68.18

Gene sequence:

>795_bases
ATGACCGAAACACTCGCCCAGCTCGAAGCCCGCGATCAAGCCGTCGGGCCCACCATCCTCCTGGCCAGCGGCCGGTATTT
CAGTTTCGACAAGCCGGAGAGCACGCCCGTCAGCGTGGAGGACATCGCTCACGCGCTGTCCCACCTCTGCCGGTTCACCG
GGCACTGCCGCGGCTTCTACTCGGTCGCGCAGCACGCTGTCCTGGTCTCCCACCTGGTGCCGCCAGAGCACGCATTCCAC
GCACTGCACCACGACGACGTGGAGGCGGTCATGGGCGACATGTCCAGCCCCCTGAAACGCCTCATGCCCGAGTACAAGGC
GCTGGAGCGCCGCGTGGAGGCCGCCATCCTGGCGCAATTCGGACTGCCTGCGGCCACGCCCGCAGAGGTCAAGCACGCGG
ACCTCGTGGCGCTACGCACGGAGCAGCGTGACCTGATGCACATCGACGGCGGCCGGTGGCCATCGCTGGACGGCATCGAG
CCGACCCCAAGTTTCGGGCTGCAGCCCATGGGCCCCAATTCGGCGCGGCAGCTCTACCTTGCCCGGCACCGGGAGCTGCT
GGCGGCGCGCGGTGCGCACGGGGCCGAGATCATTGCCCCCGCGAAGGACACGAAGCATTACACCCCAGCACCAGGCGAAG
ACGGATGGGTCACCGAGCGGATCTGGAAGGGCACCCCATACGACTTCATGCGCCTGGCCCGAGGGCTCGTGTACCTGACG
CCGGAGCCCGCCGAAACACGGGCTCGCCAAATGACCAACGCGCCCGCCACTGGCGCAGAACGGACACCCGCATGA

Upstream 100 bases:

>100_bases
GCCAGGCGCTCTGGGACACCTACAACGCCGCCGACCTGCCCGCGTACTTCTCGCGGCCTCGCGCGCTCGACATCAAGCCC
CCGCCACAAGGAAATACTCA

Downstream 100 bases:

>100_bases
ATATGGAAAGCCATATCACCCCGCAGGACGCCCCCATGGGCACCAAGGCGCCATCCATTGGCGGCGGATACTGGTGCAAG
ACCCCCAAGGGATGGAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MTETLAQLEARDQAVGPTILLASGRYFSFDKPESTPVSVEDIAHALSHLCRFTGHCRGFYSVAQHAVLVSHLVPPEHAFH
ALHHDDVEAVMGDMSSPLKRLMPEYKALERRVEAAILAQFGLPAATPAEVKHADLVALRTEQRDLMHIDGGRWPSLDGIE
PTPSFGLQPMGPNSARQLYLARHRELLAARGAHGAEIIAPAKDTKHYTPAPGEDGWVTERIWKGTPYDFMRLARGLVYLT
PEPAETRARQMTNAPATGAERTPA

Sequences:

>Translated_264_residues
MTETLAQLEARDQAVGPTILLASGRYFSFDKPESTPVSVEDIAHALSHLCRFTGHCRGFYSVAQHAVLVSHLVPPEHAFH
ALHHDDVEAVMGDMSSPLKRLMPEYKALERRVEAAILAQFGLPAATPAEVKHADLVALRTEQRDLMHIDGGRWPSLDGIE
PTPSFGLQPMGPNSARQLYLARHRELLAARGAHGAEIIAPAKDTKHYTPAPGEDGWVTERIWKGTPYDFMRLARGLVYLT
PEPAETRARQMTNAPATGAERTPA
>Mature_263_residues
TETLAQLEARDQAVGPTILLASGRYFSFDKPESTPVSVEDIAHALSHLCRFTGHCRGFYSVAQHAVLVSHLVPPEHAFHA
LHHDDVEAVMGDMSSPLKRLMPEYKALERRVEAAILAQFGLPAATPAEVKHADLVALRTEQRDLMHIDGGRWPSLDGIEP
TPSFGLQPMGPNSARQLYLARHRELLAARGAHGAEIIAPAKDTKHYTPAPGEDGWVTERIWKGTPYDFMRLARGLVYLTP
EPAETRARQMTNAPATGAERTPA

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082090, Length=170, Percent_Identity=46.4705882352941, Blast_Score=163, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29017; Mature: 28886

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETLAQLEARDQAVGPTILLASGRYFSFDKPESTPVSVEDIAHALSHLCRFTGHCRGFY
CCHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SVAQHAVLVSHLVPPEHAFHALHHDDVEAVMGDMSSPLKRLMPEYKALERRVEAAILAQF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLPAATPAEVKHADLVALRTEQRDLMHIDGGRWPSLDGIEPTPSFGLQPMGPNSARQLYL
CCCCCCCCHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ARHRELLAARGAHGAEIIAPAKDTKHYTPAPGEDGWVTERIWKGTPYDFMRLARGLVYLT
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCEEEEC
PEPAETRARQMTNAPATGAERTPA
CCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TETLAQLEARDQAVGPTILLASGRYFSFDKPESTPVSVEDIAHALSHLCRFTGHCRGFY
CHHHHHHHHHHHHCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SVAQHAVLVSHLVPPEHAFHALHHDDVEAVMGDMSSPLKRLMPEYKALERRVEAAILAQF
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLPAATPAEVKHADLVALRTEQRDLMHIDGGRWPSLDGIEPTPSFGLQPMGPNSARQLYL
CCCCCCCCHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ARHRELLAARGAHGAEIIAPAKDTKHYTPAPGEDGWVTERIWKGTPYDFMRLARGLVYLT
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHCCEEEEC
PEPAETRARQMTNAPATGAERTPA
CCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]