Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120610352

Identifier: 120610352

GI number: 120610352

Start: 1830557

End: 1830955

Strand: Reverse

Name: 120610352

Synonym: Aave_1669

Alternate gene names: NA

Gene position: 1830955-1830557 (Counterclockwise)

Preceding gene: 120610353

Following gene: 120610351

Centisome position: 34.21

GC content: 67.17

Gene sequence:

>399_bases
ATGAATATGGAAAGCCATATCACCCCGCAGGACGCCCCCATGGGCACCAAGGCGCCATCCATTGGCGGCGGATACTGGTG
CAAGACCCCCAAGGGATGGAAATGGGGCGGCCCCGGCGGCAACGGCAGCACGCTTCCGCACCCGGGCGGCGACTGGGACG
GACGGCTGCTGCCTCCATCGGGCACCCTGCCCGCCCAACGAACGCCCCAGCCCCCGGCAGATCGCCAGGCATGTGCGAAG
GCGCTCGCCGCGGGCCTGCAAATGCCCAGTGCGAAGGCCCTGGAGATCATCAGGTACGTCTCCTGGGACCGGTCCTACAG
CGTGTGCAATCTGGATGCGCTGGAGCTGGTCCGGGAGGTCGAGCGCTACTACGGACGGACGGAAGGAGGTGCAGCATGA

Upstream 100 bases:

>100_bases
GCCTGGCCCGAGGGCTCGTGTACCTGACGCCGGAGCCCGCCGAAACACGGGCTCGCCAAATGACCAACGCGCCCGCCACT
GGCGCAGAACGGACACCCGC

Downstream 100 bases:

>100_bases
AGATGGCCCGCCCTTCCGCCCGCGACATCGATGCAGCCGACGAACTTCACTGGGTGCTCTCCGCGATCGACTCACGATGG
GGAGGCCCGTGGGCGACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MNMESHITPQDAPMGTKAPSIGGGYWCKTPKGWKWGGPGGNGSTLPHPGGDWDGRLLPPSGTLPAQRTPQPPADRQACAK
ALAAGLQMPSAKALEIIRYVSWDRSYSVCNLDALELVREVERYYGRTEGGAA

Sequences:

>Translated_132_residues
MNMESHITPQDAPMGTKAPSIGGGYWCKTPKGWKWGGPGGNGSTLPHPGGDWDGRLLPPSGTLPAQRTPQPPADRQACAK
ALAAGLQMPSAKALEIIRYVSWDRSYSVCNLDALELVREVERYYGRTEGGAA
>Mature_132_residues
MNMESHITPQDAPMGTKAPSIGGGYWCKTPKGWKWGGPGGNGSTLPHPGGDWDGRLLPPSGTLPAQRTPQPPADRQACAK
ALAAGLQMPSAKALEIIRYVSWDRSYSVCNLDALELVREVERYYGRTEGGAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14107; Mature: 14107

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMESHITPQDAPMGTKAPSIGGGYWCKTPKGWKWGGPGGNGSTLPHPGGDWDGRLLPPS
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
GTLPAQRTPQPPADRQACAKALAAGLQMPSAKALEIIRYVSWDRSYSVCNLDALELVREV
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEECCHHHHHHHHH
ERYYGRTEGGAA
HHHHCCCCCCCC
>Mature Secondary Structure
MNMESHITPQDAPMGTKAPSIGGGYWCKTPKGWKWGGPGGNGSTLPHPGGDWDGRLLPPS
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
GTLPAQRTPQPPADRQACAKALAAGLQMPSAKALEIIRYVSWDRSYSVCNLDALELVREV
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEECCHHHHHHHHH
ERYYGRTEGGAA
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA