Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is murI [H]
Identifier: 120610174
GI number: 120610174
Start: 1648610
End: 1649500
Strand: Reverse
Name: murI [H]
Synonym: Aave_1488
Alternate gene names: 120610174
Gene position: 1649500-1648610 (Counterclockwise)
Preceding gene: 120610175
Following gene: 120610173
Centisome position: 30.82
GC content: 72.39
Gene sequence:
>891_bases ATGACATCAGCCACGCAGCGCCCCATCGGCGTGTTCGACAGCGGCGTCGGCGGCCTGAGCGTGCTGCGCGCGCTGCGTGC CGAACTGCCGCACGAGCGCTTCGTCTATCTGGCCGACAGCGGCAATGCGCCCTACGGCGAACGCGGCGATGCCTATGTGG CCGCGCGCACCCACGCCATCGCCGGGTATCTGCAGCGAACGCACGGCATCAAGGCCCTGGTCGTGGCCTGCAACACGGCG ACCGCGGCCGCCATCCATGAAGTCCGCGCACGGCATGCCGACCTGCCGCTGGTAGGGGTGGAGCCCGCCCTCAAGCCCGC GCTGTCCCTGACGCGCACCGGCCGGGTGGGCGTGATCGGGACGCGCGGGACGTTGTCGAGCGCCAAGTTCCAGCGCCTGC GGGCATCGCTGCAAGGCCCCGTCGAGTTCGTGGTGCAGCCCTGCGACGGGCTGGCCCACGCCATCGAGCGCAGCACGGCC GACACCCTTCCCGACGATCCTGCGACGGCCGAGATCCGCGCGCTCTGCGCCCGGTACATGGCAGCGCTCGGTCCTTTCGG CGCCGCGCCCGGGGAGATCGACACGCTCGTGCTGGGCTGCACGCACTACCTCTTCGCCGAGGATGCGCTGCGAGCGCACA CCGGCCCGCAGGTGCGCCTGGTGGAGACGGGCGAGCCCGTGGCGCGCCAGACGCGCCGGCTGCTCGAAGCGGCCGGCGCC CTGGCCGCGGCCACCGTTCCGGCCACGGGCACCACGAGCCTCTTCACGACAGGAGCCCTGCCCCTGCTGCAGGCGGCCGC ACACCGCTGGCTGCAGTTGCCGGCATCGGCATGCGCCCTGGTCGAGGTACCTCAGGAAGCGGCCGGCGAATGGTTGGGAA CGGGAACCTGA
Upstream 100 bases:
>100_bases CTGACGCGCGTGCGCGCTCCGGCGCGCCCTGCACTACCATTCGGGGCCCGCGGCGCACACAGGGCGCGCCGCAGGCCCCT TTCACATTCGCCCCTCCGAC
Downstream 100 bases:
>100_bases AACGGTTCCGGTAGCACCGTCAAAAGCCCGGCGTCGCTGCGGCCCAGGGCCTGCGGGACGGCTCCCAGCTCTCCTGTATC TCCCCCCGGCGCCCACGGCG
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTSATQRPIGVFDSGVGGLSVLRALRAELPHERFVYLADSGNAPYGERGDAYVAARTHAIAGYLQRTHGIKALVVACNTA TAAAIHEVRARHADLPLVGVEPALKPALSLTRTGRVGVIGTRGTLSSAKFQRLRASLQGPVEFVVQPCDGLAHAIERSTA DTLPDDPATAEIRALCARYMAALGPFGAAPGEIDTLVLGCTHYLFAEDALRAHTGPQVRLVETGEPVARQTRRLLEAAGA LAAATVPATGTTSLFTTGALPLLQAAAHRWLQLPASACALVEVPQEAAGEWLGTGT
Sequences:
>Translated_296_residues MTSATQRPIGVFDSGVGGLSVLRALRAELPHERFVYLADSGNAPYGERGDAYVAARTHAIAGYLQRTHGIKALVVACNTA TAAAIHEVRARHADLPLVGVEPALKPALSLTRTGRVGVIGTRGTLSSAKFQRLRASLQGPVEFVVQPCDGLAHAIERSTA DTLPDDPATAEIRALCARYMAALGPFGAAPGEIDTLVLGCTHYLFAEDALRAHTGPQVRLVETGEPVARQTRRLLEAAGA LAAATVPATGTTSLFTTGALPLLQAAAHRWLQLPASACALVEVPQEAAGEWLGTGT >Mature_295_residues TSATQRPIGVFDSGVGGLSVLRALRAELPHERFVYLADSGNAPYGERGDAYVAARTHAIAGYLQRTHGIKALVVACNTAT AAAIHEVRARHADLPLVGVEPALKPALSLTRTGRVGVIGTRGTLSSAKFQRLRASLQGPVEFVVQPCDGLAHAIERSTAD TLPDDPATAEIRALCARYMAALGPFGAAPGEIDTLVLGCTHYLFAEDALRAHTGPQVRLVETGEPVARQTRRLLEAAGAL AAATVPATGTTSLFTTGALPLLQAAAHRWLQLPASACALVEVPQEAAGEWLGTGT
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=267, Percent_Identity=33.7078651685393, Blast_Score=122, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 30862; Mature: 30730
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS00923 ASP_GLU_RACEMASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSATQRPIGVFDSGVGGLSVLRALRAELPHERFVYLADSGNAPYGERGDAYVAARTHAI CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEHHHHHH AGYLQRTHGIKALVVACNTATAAAIHEVRARHADLPLVGVEPALKPALSLTRTGRVGVIG HHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHCCCCEEEEE TRGTLSSAKFQRLRASLQGPVEFVVQPCDGLAHAIERSTADTLPDDPATAEIRALCARYM CCCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH AALGPFGAAPGEIDTLVLGCTHYLFAEDALRAHTGPQVRLVETGEPVARQTRRLLEAAGA HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHH LAAATVPATGTTSLFTTGALPLLQAAAHRWLQLPASACALVEVPQEAAGEWLGTGT HHEEECCCCCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCCCCC >Mature Secondary Structure TSATQRPIGVFDSGVGGLSVLRALRAELPHERFVYLADSGNAPYGERGDAYVAARTHAI CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEHHHHHH AGYLQRTHGIKALVVACNTATAAAIHEVRARHADLPLVGVEPALKPALSLTRTGRVGVIG HHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHCCCCEEEEE TRGTLSSAKFQRLRASLQGPVEFVVQPCDGLAHAIERSTADTLPDDPATAEIRALCARYM CCCCHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH AALGPFGAAPGEIDTLVLGCTHYLFAEDALRAHTGPQVRLVETGEPVARQTRRLLEAAGA HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHH LAAATVPATGTTSLFTTGALPLLQAAAHRWLQLPASACALVEVPQEAAGEWLGTGT HHEEECCCCCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]