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The map label for this gene is 120610157

Identifier: 120610157

GI number: 120610157

Start: 1624635

End: 1625198

Strand: Direct

Name: 120610157

Synonym: Aave_1470

Alternate gene names: NA

Gene position: 1624635-1625198 (Clockwise)

Preceding gene: 120610156

Following gene: 120610158

Centisome position: 30.35

GC content: 69.15

Gene sequence:

>564_bases
ATGCATCGGGAAGCGATGGCACGGAAGGGATTCATCAGGGCGGGGCTCGCGGCCGCGGCGGCGGCATGGCTGCTGGGCGG
CTGCGGCATGATCAGCAACCTGAACCGCCCGCAGGAGGCCCCCACGGCCGTGCCGCCGGCCGTGTTCGAAATCGTCGCGG
ACCCTGGCGTCAACCCCGATATCCACGGCACGCCCAAGCCCATCCTGCTGAGGATTTACGAACTGCGCGCGGCGGCGGCT
TTCGACCGGGCAAGCTACCTGGACCTGCAGGACAAGGACGAAGCCCAGCTGGGGGCCGATTTCGTGCGGCGCGAGGAGAT
CCTGCTGCAGCCGGGCGAGCGGCGCACCATCGAGCGCAAGGGCAGTGCGGATGTCCGCACCTTCGCCGTGTTCGCAGGCT
ACCGCGACCTGGAGCGCAGCACCTGGCGCGCGACCGCGGGCGCTCCCAACTCCGTGGAGATGCGCCGCCGCTGGTGGGGC
CTGGGCGAAACCGAGCGGCTCAAGCCCGTGCAGTACCGCATCACAGTGGGCAAGGATGCGGTGAAGATCCAGACCGCTCC
TTAA

Upstream 100 bases:

>100_bases
CAGGACAACTTCAGCGCCCTCGCGGTCTGGGTCGCGGACAGCGAGGATGGCGCCTGACAGGGCGGATGTGGCGTTTTCAC
CGGAACCTAAGGAGTCGGAT

Downstream 100 bases:

>100_bases
GCATCAAAGAACGAACACATAACGAAAGCCTGAAATCCACCATGGTTTGGCAGCGCAAGGTCGTCTGGGCCGAAGGGATG
TTCCTTCGCCCGCAGCATTT

Product: putative lipoprotein

Products: NA

Alternate protein names: Type VI Secretion Lipoprotein; Type VI Secretion Lipoprotein/VasD; SciN Protein; Replication/Virulence Associated Protein; Outer Membrane Lipoprotein; Type VI Secretion Protein VasD

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MHREAMARKGFIRAGLAAAAAAWLLGGCGMISNLNRPQEAPTAVPPAVFEIVADPGVNPDIHGTPKPILLRIYELRAAAA
FDRASYLDLQDKDEAQLGADFVRREEILLQPGERRTIERKGSADVRTFAVFAGYRDLERSTWRATAGAPNSVEMRRRWWG
LGETERLKPVQYRITVGKDAVKIQTAP

Sequences:

>Translated_187_residues
MHREAMARKGFIRAGLAAAAAAWLLGGCGMISNLNRPQEAPTAVPPAVFEIVADPGVNPDIHGTPKPILLRIYELRAAAA
FDRASYLDLQDKDEAQLGADFVRREEILLQPGERRTIERKGSADVRTFAVFAGYRDLERSTWRATAGAPNSVEMRRRWWG
LGETERLKPVQYRITVGKDAVKIQTAP
>Mature_187_residues
MHREAMARKGFIRAGLAAAAAAWLLGGCGMISNLNRPQEAPTAVPPAVFEIVADPGVNPDIHGTPKPILLRIYELRAAAA
FDRASYLDLQDKDEAQLGADFVRREEILLQPGERRTIERKGSADVRTFAVFAGYRDLERSTWRATAGAPNSVEMRRRWWG
LGETERLKPVQYRITVGKDAVKIQTAP

Specific function: Unknown

COG id: COG3521

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20709; Mature: 20709

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHREAMARKGFIRAGLAAAAAAWLLGGCGMISNLNRPQEAPTAVPPAVFEIVADPGVNPD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCC
IHGTPKPILLRIYELRAAAAFDRASYLDLQDKDEAQLGADFVRREEILLQPGERRTIERK
CCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
GSADVRTFAVFAGYRDLERSTWRATAGAPNSVEMRRRWWGLGETERLKPVQYRITVGKDA
CCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCE
VKIQTAP
EEEEECC
>Mature Secondary Structure
MHREAMARKGFIRAGLAAAAAAWLLGGCGMISNLNRPQEAPTAVPPAVFEIVADPGVNPD
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCC
IHGTPKPILLRIYELRAAAAFDRASYLDLQDKDEAQLGADFVRREEILLQPGERRTIERK
CCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
GSADVRTFAVFAGYRDLERSTWRATAGAPNSVEMRRRWWGLGETERLKPVQYRITVGKDA
CCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCE
VKIQTAP
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA