Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610151
Identifier: 120610151
GI number: 120610151
Start: 1616619
End: 1617287
Strand: Reverse
Name: 120610151
Synonym: Aave_1464
Alternate gene names: NA
Gene position: 1617287-1616619 (Counterclockwise)
Preceding gene: 120610152
Following gene: 120610149
Centisome position: 30.21
GC content: 70.55
Gene sequence:
>669_bases ATGAAACGATGGATCGTCCTGGCGGCCGCGGCGCTGGCTGCCGGCACCCTGCAGGCTGCCGGGGCCCCCGCCCCCACCGT GCGCGTCGCCAACCCGGAACTGCTGGCCGCGCTGCAGAACCCCGAGGCAGCCCTTCAGGCCGCGCGCACGCCGCTCGCAT TCGACAACGGCGAGTCGGCCCGCAACTGCCGCGAATATGCGGAGCTGCTGCCGAAGAGCCGCCCCGTCGAGTCGGAACGC AACTTCGAGATCCGCGGCGAATACCTGCTGTGCGACGCCCTGCACCTGGTGGCCGGCAAGCCCTTCGCCGCGGAGAAGGC CGGGGTCGCCGCGCGCCGGGCCAGAACGCTCCATGACAGGCTCGATGTGCGGACGTTCCCGTCATCGCTGCGCAACCGCG CCGATGCGAAGCGCCATACGGTCAAGACGGTGCTTCCCGGAGCCTCGCATGCCCAAGGCGCCGTCGTCGCGGTCGAGACG CCGGACCAGCGCTTCCGGCTGGAAGTGGTGGCCACCGTCGCCCCGGGCAAAGGCCGGAAGCCGGAGTGGATCGTCTGGGT GTCGGACGAATCGAAAACCGGCACCTACCGGGGTTACAGCACCCTCGTCGTGCAACCGCCCCGGAACAAGTCCGGGGCCT ACACCGCCGCAGACGCTTCACGCCCCTGA
Upstream 100 bases:
>100_bases AACCTCGGCCTCGCCAGCCCTTTCGCCAAGCTCAAACCCTACCTGACGTCCAAAGGCCTACCCGGCACGGCAAGGAAGCC GCACTGCCGGAGAAAATCAA
Downstream 100 bases:
>100_bases GCGGCATCGCCCGCCATGCCTGCGGAGCGCGCCGGCAGGTAGGGAAGGCGGCGCAGGCTCCACCCGACGGTGCCGCGCCT GCCGGGTCACATCGCCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MKRWIVLAAAALAAGTLQAAGAPAPTVRVANPELLAALQNPEAALQAARTPLAFDNGESARNCREYAELLPKSRPVESER NFEIRGEYLLCDALHLVAGKPFAAEKAGVAARRARTLHDRLDVRTFPSSLRNRADAKRHTVKTVLPGASHAQGAVVAVET PDQRFRLEVVATVAPGKGRKPEWIVWVSDESKTGTYRGYSTLVVQPPRNKSGAYTAADASRP
Sequences:
>Translated_222_residues MKRWIVLAAAALAAGTLQAAGAPAPTVRVANPELLAALQNPEAALQAARTPLAFDNGESARNCREYAELLPKSRPVESER NFEIRGEYLLCDALHLVAGKPFAAEKAGVAARRARTLHDRLDVRTFPSSLRNRADAKRHTVKTVLPGASHAQGAVVAVET PDQRFRLEVVATVAPGKGRKPEWIVWVSDESKTGTYRGYSTLVVQPPRNKSGAYTAADASRP >Mature_222_residues MKRWIVLAAAALAAGTLQAAGAPAPTVRVANPELLAALQNPEAALQAARTPLAFDNGESARNCREYAELLPKSRPVESER NFEIRGEYLLCDALHLVAGKPFAAEKAGVAARRARTLHDRLDVRTFPSSLRNRADAKRHTVKTVLPGASHAQGAVVAVET PDQRFRLEVVATVAPGKGRKPEWIVWVSDESKTGTYRGYSTLVVQPPRNKSGAYTAADASRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23925; Mature: 23925
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRWIVLAAAALAAGTLQAAGAPAPTVRVANPELLAALQNPEAALQAARTPLAFDNGESA CCCEEEEHHHHHHHHHHHCCCCCCCEEEECCHHHEEEECCCHHHHHHHCCCCEECCCCCH RNCREYAELLPKSRPVESERNFEIRGEYLLCDALHLVAGKPFAAEKAGVAARRARTLHDR HHHHHHHHHCCCCCCCCCCCCEEEECCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHH LDVRTFPSSLRNRADAKRHTVKTVLPGASHAQGAVVAVETPDQRFRLEVVATVAPGKGRK HCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCC PEWIVWVSDESKTGTYRGYSTLVVQPPRNKSGAYTAADASRP CCEEEEECCCCCCCEECCEEEEEEECCCCCCCCEECCCCCCC >Mature Secondary Structure MKRWIVLAAAALAAGTLQAAGAPAPTVRVANPELLAALQNPEAALQAARTPLAFDNGESA CCCEEEEHHHHHHHHHHHCCCCCCCEEEECCHHHEEEECCCHHHHHHHCCCCEECCCCCH RNCREYAELLPKSRPVESERNFEIRGEYLLCDALHLVAGKPFAAEKAGVAARRARTLHDR HHHHHHHHHCCCCCCCCCCCCEEEECCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHH LDVRTFPSSLRNRADAKRHTVKTVLPGASHAQGAVVAVETPDQRFRLEVVATVAPGKGRK HCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCC PEWIVWVSDESKTGTYRGYSTLVVQPPRNKSGAYTAADASRP CCEEEEECCCCCCCEECCEEEEEEECCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA