Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120610151

Identifier: 120610151

GI number: 120610151

Start: 1616619

End: 1617287

Strand: Reverse

Name: 120610151

Synonym: Aave_1464

Alternate gene names: NA

Gene position: 1617287-1616619 (Counterclockwise)

Preceding gene: 120610152

Following gene: 120610149

Centisome position: 30.21

GC content: 70.55

Gene sequence:

>669_bases
ATGAAACGATGGATCGTCCTGGCGGCCGCGGCGCTGGCTGCCGGCACCCTGCAGGCTGCCGGGGCCCCCGCCCCCACCGT
GCGCGTCGCCAACCCGGAACTGCTGGCCGCGCTGCAGAACCCCGAGGCAGCCCTTCAGGCCGCGCGCACGCCGCTCGCAT
TCGACAACGGCGAGTCGGCCCGCAACTGCCGCGAATATGCGGAGCTGCTGCCGAAGAGCCGCCCCGTCGAGTCGGAACGC
AACTTCGAGATCCGCGGCGAATACCTGCTGTGCGACGCCCTGCACCTGGTGGCCGGCAAGCCCTTCGCCGCGGAGAAGGC
CGGGGTCGCCGCGCGCCGGGCCAGAACGCTCCATGACAGGCTCGATGTGCGGACGTTCCCGTCATCGCTGCGCAACCGCG
CCGATGCGAAGCGCCATACGGTCAAGACGGTGCTTCCCGGAGCCTCGCATGCCCAAGGCGCCGTCGTCGCGGTCGAGACG
CCGGACCAGCGCTTCCGGCTGGAAGTGGTGGCCACCGTCGCCCCGGGCAAAGGCCGGAAGCCGGAGTGGATCGTCTGGGT
GTCGGACGAATCGAAAACCGGCACCTACCGGGGTTACAGCACCCTCGTCGTGCAACCGCCCCGGAACAAGTCCGGGGCCT
ACACCGCCGCAGACGCTTCACGCCCCTGA

Upstream 100 bases:

>100_bases
AACCTCGGCCTCGCCAGCCCTTTCGCCAAGCTCAAACCCTACCTGACGTCCAAAGGCCTACCCGGCACGGCAAGGAAGCC
GCACTGCCGGAGAAAATCAA

Downstream 100 bases:

>100_bases
GCGGCATCGCCCGCCATGCCTGCGGAGCGCGCCGGCAGGTAGGGAAGGCGGCGCAGGCTCCACCCGACGGTGCCGCGCCT
GCCGGGTCACATCGCCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKRWIVLAAAALAAGTLQAAGAPAPTVRVANPELLAALQNPEAALQAARTPLAFDNGESARNCREYAELLPKSRPVESER
NFEIRGEYLLCDALHLVAGKPFAAEKAGVAARRARTLHDRLDVRTFPSSLRNRADAKRHTVKTVLPGASHAQGAVVAVET
PDQRFRLEVVATVAPGKGRKPEWIVWVSDESKTGTYRGYSTLVVQPPRNKSGAYTAADASRP

Sequences:

>Translated_222_residues
MKRWIVLAAAALAAGTLQAAGAPAPTVRVANPELLAALQNPEAALQAARTPLAFDNGESARNCREYAELLPKSRPVESER
NFEIRGEYLLCDALHLVAGKPFAAEKAGVAARRARTLHDRLDVRTFPSSLRNRADAKRHTVKTVLPGASHAQGAVVAVET
PDQRFRLEVVATVAPGKGRKPEWIVWVSDESKTGTYRGYSTLVVQPPRNKSGAYTAADASRP
>Mature_222_residues
MKRWIVLAAAALAAGTLQAAGAPAPTVRVANPELLAALQNPEAALQAARTPLAFDNGESARNCREYAELLPKSRPVESER
NFEIRGEYLLCDALHLVAGKPFAAEKAGVAARRARTLHDRLDVRTFPSSLRNRADAKRHTVKTVLPGASHAQGAVVAVET
PDQRFRLEVVATVAPGKGRKPEWIVWVSDESKTGTYRGYSTLVVQPPRNKSGAYTAADASRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23925; Mature: 23925

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRWIVLAAAALAAGTLQAAGAPAPTVRVANPELLAALQNPEAALQAARTPLAFDNGESA
CCCEEEEHHHHHHHHHHHCCCCCCCEEEECCHHHEEEECCCHHHHHHHCCCCEECCCCCH
RNCREYAELLPKSRPVESERNFEIRGEYLLCDALHLVAGKPFAAEKAGVAARRARTLHDR
HHHHHHHHHCCCCCCCCCCCCEEEECCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LDVRTFPSSLRNRADAKRHTVKTVLPGASHAQGAVVAVETPDQRFRLEVVATVAPGKGRK
HCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCC
PEWIVWVSDESKTGTYRGYSTLVVQPPRNKSGAYTAADASRP
CCEEEEECCCCCCCEECCEEEEEEECCCCCCCCEECCCCCCC
>Mature Secondary Structure
MKRWIVLAAAALAAGTLQAAGAPAPTVRVANPELLAALQNPEAALQAARTPLAFDNGESA
CCCEEEEHHHHHHHHHHHCCCCCCCEEEECCHHHEEEECCCHHHHHHHCCCCEECCCCCH
RNCREYAELLPKSRPVESERNFEIRGEYLLCDALHLVAGKPFAAEKAGVAARRARTLHDR
HHHHHHHHHCCCCCCCCCCCCEEEECCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LDVRTFPSSLRNRADAKRHTVKTVLPGASHAQGAVVAVETPDQRFRLEVVATVAPGKGRK
HCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCC
PEWIVWVSDESKTGTYRGYSTLVVQPPRNKSGAYTAADASRP
CCEEEEECCCCCCCEECCEEEEEEECCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA