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The map label for this gene is rbn [C]

Identifier: 120610141

GI number: 120610141

Start: 1600511

End: 1601851

Strand: Direct

Name: rbn [C]

Synonym: Aave_1454

Alternate gene names: 120610141

Gene position: 1600511-1601851 (Clockwise)

Preceding gene: 120610138

Following gene: 120610150

Centisome position: 29.9

GC content: 68.75

Gene sequence:

>1341_bases
ATGCCCATTGCCCACCTCGCGCGGCGATTCGAAACCGTGCTGTCGGACCTGTCGCGCTTTCCCTGGCGCACGACCGCGCA
CACGCTGCGCGAGCGCTTCCGGGAGGACCGCCTGGGCCTCACCGCGAGCAGCCTGACATTCACCACGCTGCTGGCCCTGG
TGCCCTTCTTCACCGTGGCGCTGGCCATTTTCACGGCCTTCCCGATCTTCCGCACGCTGCAGACGGGTTTGCAGCGCTGG
CTGGTGGACAGCCTCGTGCCGGACAGCATTTCACGGCAGGTGCTGGGGTACCTGACCCAGTTCGCCGCCAAGGCGAGCGG
ACTGGGGGTGGCGGGGTTCTCCATCCTGCTGGCCACGGCCCTCGCGCTCATCCTCACGATCGACCGTACGCTGAACAACA
TCTGGCGCGTGCCCCGCCTGCGCCCCCTGGGACAGCGGGTGCTGATCTATTGGGCCGTCATCACGCTCGGGCCGCTGGTG
CTCGCCGCGAGCCTGGCATTGACCACGTCGGTCGCATCCAGCGCATCGCGCGGCCTCGAAGGTGCGTTGCCGGACAGTGC
CCGGCTGCTGTTCGACTCCATCGAATTCCTGCTGCTGGCCGGGGGCACGGCGGCGCTGTACCGCTATGTGCCCAACACGC
AGGTGCGCTGGCGGCATGCCTGGTCCGGCGGGGTGTTCGTGTCGGTGGGCATCGAGGTGGCCAAGAAGGTGCTGGGGCTC
TACATCGCCTCCGTGCCCACCTATTCGGTGCTCTACGGCGCTTTCGCGACCCTGCCCATTCTTCTGGTGTGGATCTACGT
GGCGTGGGTGATCGTGCTGCTCGGCGCGGTGGTGGCGGCCTACCTGCCCAGCCTCCTCATGGGGGTCGAGAGAACGGCCA
CCGAGCGGGGATGGAGCTTCCAGCTGGCGGTCGAGGTGCTGCAGCAGTTGCATGCGGCCCGCTGCACGCCACAGCGCGGA
CTGGATGCCGGCGGGCTGGCCCAAGCGCTGCGCGTGGATGTGCTGCAGCTCGAACCGGTGCTGGAAGCGCTGACCGGGCT
GGACTGGATCGTGCAGGTCAACGAGGCGGCCCATGGGGCGGCCGACGACGAGACTCCGCGGTATGTGCTGTTGGCGGAAC
CTGCCACCACCTTCCTGGAGCCTCTGGTGCAGCGGCTGCTCATCGAGCGCGGGGAGAGTCTGGAGCGCTTCTGGGGCAAC
ACCGGCATGGCCGTGCTCAAGCTCGCCGACGTGCTTCCCCGGCCCGGTGGTGCGGTGGCAGGTGTAGGGGTGTACCGAGA
CCGCCCGGCTCTGCGCAGTCCCGAAGCGCTCTCAGAGGCTGCGGCCGGCCGCGGTGCCTGA

Upstream 100 bases:

>100_bases
GGCTGCCCACGGCGAGCCAGCGGGTGAGCGCGATGGTGGGGGCCGTTGGGGCGGGGATGGGCGCGGAGGATCCAGGCATC
GGGATGGCATCATATCGGCC

Downstream 100 bases:

>100_bases
CAGGACGGCGCCTTCGAGGGTGGCGGGATAGGGGCCTGCGACATAGTCGCCGCAGGCCACCAGGCCGGCCATGATGTGCT
GCGGAGGGCGATCCAGTGCC

Product: putative ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MPIAHLARRFETVLSDLSRFPWRTTAHTLRERFREDRLGLTASSLTFTTLLALVPFFTVALAIFTAFPIFRTLQTGLQRW
LVDSLVPDSISRQVLGYLTQFAAKASGLGVAGFSILLATALALILTIDRTLNNIWRVPRLRPLGQRVLIYWAVITLGPLV
LAASLALTTSVASSASRGLEGALPDSARLLFDSIEFLLLAGGTAALYRYVPNTQVRWRHAWSGGVFVSVGIEVAKKVLGL
YIASVPTYSVLYGAFATLPILLVWIYVAWVIVLLGAVVAAYLPSLLMGVERTATERGWSFQLAVEVLQQLHAARCTPQRG
LDAGGLAQALRVDVLQLEPVLEALTGLDWIVQVNEAAHGAADDETPRYVLLAEPATTFLEPLVQRLLIERGESLERFWGN
TGMAVLKLADVLPRPGGAVAGVGVYRDRPALRSPEALSEAAAGRGA

Sequences:

>Translated_446_residues
MPIAHLARRFETVLSDLSRFPWRTTAHTLRERFREDRLGLTASSLTFTTLLALVPFFTVALAIFTAFPIFRTLQTGLQRW
LVDSLVPDSISRQVLGYLTQFAAKASGLGVAGFSILLATALALILTIDRTLNNIWRVPRLRPLGQRVLIYWAVITLGPLV
LAASLALTTSVASSASRGLEGALPDSARLLFDSIEFLLLAGGTAALYRYVPNTQVRWRHAWSGGVFVSVGIEVAKKVLGL
YIASVPTYSVLYGAFATLPILLVWIYVAWVIVLLGAVVAAYLPSLLMGVERTATERGWSFQLAVEVLQQLHAARCTPQRG
LDAGGLAQALRVDVLQLEPVLEALTGLDWIVQVNEAAHGAADDETPRYVLLAEPATTFLEPLVQRLLIERGESLERFWGN
TGMAVLKLADVLPRPGGAVAGVGVYRDRPALRSPEALSEAAAGRGA
>Mature_445_residues
PIAHLARRFETVLSDLSRFPWRTTAHTLRERFREDRLGLTASSLTFTTLLALVPFFTVALAIFTAFPIFRTLQTGLQRWL
VDSLVPDSISRQVLGYLTQFAAKASGLGVAGFSILLATALALILTIDRTLNNIWRVPRLRPLGQRVLIYWAVITLGPLVL
AASLALTTSVASSASRGLEGALPDSARLLFDSIEFLLLAGGTAALYRYVPNTQVRWRHAWSGGVFVSVGIEVAKKVLGLY
IASVPTYSVLYGAFATLPILLVWIYVAWVIVLLGAVVAAYLPSLLMGVERTATERGWSFQLAVEVLQQLHAARCTPQRGL
DAGGLAQALRVDVLQLEPVLEALTGLDWIVQVNEAAHGAADDETPRYVLLAEPATTFLEPLVQRLLIERGESLERFWGNT
GMAVLKLADVLPRPGGAVAGVGVYRDRPALRSPEALSEAAAGRGA

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=261, Percent_Identity=36.3984674329502, Blast_Score=145, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 48386; Mature: 48255

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIAHLARRFETVLSDLSRFPWRTTAHTLRERFREDRLGLTASSLTFTTLLALVPFFTVA
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LAIFTAFPIFRTLQTGLQRWLVDSLVPDSISRQVLGYLTQFAAKASGLGVAGFSILLATA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LALILTIDRTLNNIWRVPRLRPLGQRVLIYWAVITLGPLVLAASLALTTSVASSASRGLE
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GALPDSARLLFDSIEFLLLAGGTAALYRYVPNTQVRWRHAWSGGVFVSVGIEVAKKVLGL
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCEEEEHHHHHHHHHHHH
YIASVPTYSVLYGAFATLPILLVWIYVAWVIVLLGAVVAAYLPSLLMGVERTATERGWSF
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QLAVEVLQQLHAARCTPQRGLDAGGLAQALRVDVLQLEPVLEALTGLDWIVQVNEAAHGA
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECHHHCCC
ADDETPRYVLLAEPATTFLEPLVQRLLIERGESLERFWGNTGMAVLKLADVLPRPGGAVA
CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCCCEE
GVGVYRDRPALRSPEALSEAAAGRGA
CCCCCCCCCCCCCCHHHHHHHCCCCC
>Mature Secondary Structure 
PIAHLARRFETVLSDLSRFPWRTTAHTLRERFREDRLGLTASSLTFTTLLALVPFFTVA
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LAIFTAFPIFRTLQTGLQRWLVDSLVPDSISRQVLGYLTQFAAKASGLGVAGFSILLATA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LALILTIDRTLNNIWRVPRLRPLGQRVLIYWAVITLGPLVLAASLALTTSVASSASRGLE
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GALPDSARLLFDSIEFLLLAGGTAALYRYVPNTQVRWRHAWSGGVFVSVGIEVAKKVLGL
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCEEEEHHHHHHHHHHHH
YIASVPTYSVLYGAFATLPILLVWIYVAWVIVLLGAVVAAYLPSLLMGVERTATERGWSF
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QLAVEVLQQLHAARCTPQRGLDAGGLAQALRVDVLQLEPVLEALTGLDWIVQVNEAAHGA
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECHHHCCC
ADDETPRYVLLAEPATTFLEPLVQRLLIERGESLERFWGNTGMAVLKLADVLPRPGGAVA
CCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCCCEE
GVGVYRDRPALRSPEALSEAAAGRGA
CCCCCCCCCCCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA