Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610085
Identifier: 120610085
GI number: 120610085
Start: 1531972
End: 1533804
Strand: Reverse
Name: 120610085
Synonym: Aave_1398
Alternate gene names: NA
Gene position: 1533804-1531972 (Counterclockwise)
Preceding gene: 120610086
Following gene: 120610081
Centisome position: 28.65
GC content: 54.99
Gene sequence:
>1833_bases ATGCACCTGAAACACCTCATGATCTACAACAGCGGGCCGACCCAAGAGCTTGACCTGCAGCCGCAGTTTACCGCCGATGG TTTGCCTAAGCCGCTAATCTTGGTAGGCCTGAACGGGGCTGGCAAGACAAACGTGCTGTCGACAATTGCGGACGCCATCC TTGAACTGCAGGTGGCTGCCGGATTCAACGACATACTTCCCAATAACAAGATGGGGAGGCGCTTGTTCTATCGCCTTCTC GGGGGCTCGACGACCAGCTTGAATCGTTCTTTTGAAGTCTCAGTCGCGACATTCAAGCATGCTGAGAGCTCTTTTTCGTA CCGCGCTCAGACTGGTCCTGTGCCTGAAACAGTCATCAATAAGCTGGAGACGATCGCAGCGTTTGATGTATGGAATGTTG AACCAGCAAAGGAAGTAATTGGCGACAGCGCTCAGCTTAAAAACATCTTTATCTCGGATTCCTACAGCTTCTTTCCCGTC AATCGAAACGAAGATGCGTGGTGGCAGAGTCTGCGCATGGAGCAGTCCGAGGATGTGCGTTTCGCGCATCGTGTAAACGG CGAACTGGCGAAGCCCGTCGTACTTCAGACATCGTTCGCTCTTTTGAAGCCGTGGATCGCGGATGTCATTCTCGACCAAG CGGTTGACGCGTCTATGGTGCTTACCATGGTGTCTCAGCCCAACTCGGGACGAATCGCAGACCTTATGGCGAGGGCCAAC CAAGGCACTCTCACCGCAATCAACACTGTCTTTAGCACCATCCTTCGTCAGCAGGTTTTCGTGACGCGCGATGGTCGGGG AGCTGGTGCGTCGAAGCTGTTTTTGCGGGACCTCACTGGCAGTACCGTTCTGAGAAGCCTTGATTCCCTCTCGACTGGCC AAGCTGCATTGGCCGCGATCTTTCTTAACATCATCCGCTATTCAGACATGGGGCGGCCGGGGATACGCCTTGAAGAGATC GCGGGGATCTCTGTGATCGATGAGGTCGACGCCCACTTGCATTCGGAGCTTCAGACTGAGGTACTACCAGCATTGATGAA GCTTTTTCCTCGCGTGCAGTTCGTCGCGACTTCTCATGCCCCCCTGTTTGCGCTCGGGATGGAGCGTGTCTACGGCCCTG CTGGCTACAGTTTGGTCGAACTGCCGTCCGGCCTCACCATCAGCCCAGAGAGGTTCGGAGAGTTTCAGCGCAGCTTCGAC TACTTCACCGAGACGAAGGCCTTTGAGTTGTTGATGCGGGAAGCCGCTGTTGCCGGCAAGCGTCCTTCGGTAATCTGCGA AGGGGAAACAGATCCAAAGTATCTACAGCGAGCTGCGGAACTATTGGGCTTTGACGACTTTGCAGCCAATGTCGACTTCG ACTGGATTGGATCCAAGGAGGGTGGCACGGCCAAGAACGGCGGGGCCGGCGCATTGGACAACGCCGTGCGGCTGTTCAAG TGCAATCCGAATTTGGTTGCGGTGCCGTTGGCGCTCGTCTACGACTGCGATCAACCAGGTGAAGACTACACGCAAACCAA TTTCTTAGTCATGCGGCTGCCTCGCAACGAAGCCAACACAGTTCGAAAGGGAGGCATTGAGAATCTTCTGCCGCCGCACG TCTTCGAAGAAGAATTCTTCGAGACGAAGAAAATCGAGAGAGGCGGCGATGACAAAGTCATCACCACGACCATAGCCCTG CGCAAGGTAGCCTTCTGTGAACACATCTGCGCTCGCGGAGACGTGAAGGACTTCGCCCAGTTCGAGCCGATCATAGATCG GTTGGCACGCTTTTTTGGAATGCCGCGCTCCGATCCAAGGGCGGCTGTAGAGATAGCAGCTGTCGAAGATTAA
Upstream 100 bases:
>100_bases AATTGCCGTGCAATGTGGCTCGATGGAACGGACGGGTCACTAGGCTAGCAAAGGGACGTCCACATCGATTTCTTGCGGCC ATTTAACGTGTGAGAACGCC
Downstream 100 bases:
>100_bases AACGTCCTCGGTTCACCGACCACTTGACCGCCGGGCGATGAGGCGAGGTTCCTCCTGCACTGACAGATCGCCCTTCAGGG CTTGCCTTCTTCGGTCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 610; Mature: 610
Protein sequence:
>610_residues MHLKHLMIYNSGPTQELDLQPQFTADGLPKPLILVGLNGAGKTNVLSTIADAILELQVAAGFNDILPNNKMGRRLFYRLL GGSTTSLNRSFEVSVATFKHAESSFSYRAQTGPVPETVINKLETIAAFDVWNVEPAKEVIGDSAQLKNIFISDSYSFFPV NRNEDAWWQSLRMEQSEDVRFAHRVNGELAKPVVLQTSFALLKPWIADVILDQAVDASMVLTMVSQPNSGRIADLMARAN QGTLTAINTVFSTILRQQVFVTRDGRGAGASKLFLRDLTGSTVLRSLDSLSTGQAALAAIFLNIIRYSDMGRPGIRLEEI AGISVIDEVDAHLHSELQTEVLPALMKLFPRVQFVATSHAPLFALGMERVYGPAGYSLVELPSGLTISPERFGEFQRSFD YFTETKAFELLMREAAVAGKRPSVICEGETDPKYLQRAAELLGFDDFAANVDFDWIGSKEGGTAKNGGAGALDNAVRLFK CNPNLVAVPLALVYDCDQPGEDYTQTNFLVMRLPRNEANTVRKGGIENLLPPHVFEEEFFETKKIERGGDDKVITTTIAL RKVAFCEHICARGDVKDFAQFEPIIDRLARFFGMPRSDPRAAVEIAAVED
Sequences:
>Translated_610_residues MHLKHLMIYNSGPTQELDLQPQFTADGLPKPLILVGLNGAGKTNVLSTIADAILELQVAAGFNDILPNNKMGRRLFYRLL GGSTTSLNRSFEVSVATFKHAESSFSYRAQTGPVPETVINKLETIAAFDVWNVEPAKEVIGDSAQLKNIFISDSYSFFPV NRNEDAWWQSLRMEQSEDVRFAHRVNGELAKPVVLQTSFALLKPWIADVILDQAVDASMVLTMVSQPNSGRIADLMARAN QGTLTAINTVFSTILRQQVFVTRDGRGAGASKLFLRDLTGSTVLRSLDSLSTGQAALAAIFLNIIRYSDMGRPGIRLEEI AGISVIDEVDAHLHSELQTEVLPALMKLFPRVQFVATSHAPLFALGMERVYGPAGYSLVELPSGLTISPERFGEFQRSFD YFTETKAFELLMREAAVAGKRPSVICEGETDPKYLQRAAELLGFDDFAANVDFDWIGSKEGGTAKNGGAGALDNAVRLFK CNPNLVAVPLALVYDCDQPGEDYTQTNFLVMRLPRNEANTVRKGGIENLLPPHVFEEEFFETKKIERGGDDKVITTTIAL RKVAFCEHICARGDVKDFAQFEPIIDRLARFFGMPRSDPRAAVEIAAVED >Mature_610_residues MHLKHLMIYNSGPTQELDLQPQFTADGLPKPLILVGLNGAGKTNVLSTIADAILELQVAAGFNDILPNNKMGRRLFYRLL GGSTTSLNRSFEVSVATFKHAESSFSYRAQTGPVPETVINKLETIAAFDVWNVEPAKEVIGDSAQLKNIFISDSYSFFPV NRNEDAWWQSLRMEQSEDVRFAHRVNGELAKPVVLQTSFALLKPWIADVILDQAVDASMVLTMVSQPNSGRIADLMARAN QGTLTAINTVFSTILRQQVFVTRDGRGAGASKLFLRDLTGSTVLRSLDSLSTGQAALAAIFLNIIRYSDMGRPGIRLEEI AGISVIDEVDAHLHSELQTEVLPALMKLFPRVQFVATSHAPLFALGMERVYGPAGYSLVELPSGLTISPERFGEFQRSFD YFTETKAFELLMREAAVAGKRPSVICEGETDPKYLQRAAELLGFDDFAANVDFDWIGSKEGGTAKNGGAGALDNAVRLFK CNPNLVAVPLALVYDCDQPGEDYTQTNFLVMRLPRNEANTVRKGGIENLLPPHVFEEEFFETKKIERGGDDKVITTTIAL RKVAFCEHICARGDVKDFAQFEPIIDRLARFFGMPRSDPRAAVEIAAVED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67193; Mature: 67193
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLKHLMIYNSGPTQELDLQPQFTADGLPKPLILVGLNGAGKTNVLSTIADAILELQVAA CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC GFNDILPNNKMGRRLFYRLLGGSTTSLNRSFEVSVATFKHAESSFSYRAQTGPVPETVIN CCHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCHHHHH KLETIAAFDVWNVEPAKEVIGDSAQLKNIFISDSYSFFPVNRNEDAWWQSLRMEQSEDVR HHHHHHHEECCCCCHHHHHHCCCHHHCEEEEECCCEEEECCCCCHHHHHHHHCCCCCCCH FAHRVNGELAKPVVLQTSFALLKPWIADVILDQAVDASMVLTMVSQPNSGRIADLMARAN HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHCC QGTLTAINTVFSTILRQQVFVTRDGRGAGASKLFLRDLTGSTVLRSLDSLSTGQAALAAI CCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHH FLNIIRYSDMGRPGIRLEEIAGISVIDEVDAHLHSELQTEVLPALMKLFPRVQFVATSHA HHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC PLFALGMERVYGPAGYSLVELPSGLTISPERFGEFQRSFDYFTETKAFELLMREAAVAGK CHHHHHHHHHCCCCCCCCEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RPSVICEGETDPKYLQRAAELLGFDDFAANVDFDWIGSKEGGTAKNGGAGALDNAVRLFK CCCEEECCCCCHHHHHHHHHHHCCCHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEE CNPNLVAVPLALVYDCDQPGEDYTQTNFLVMRLPRNEANTVRKGGIENLLPPHVFEEEFF ECCCEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHH ETKKIERGGDDKVITTTIALRKVAFCEHICARGDVKDFAQFEPIIDRLARFFGMPRSDPR HHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC AAVEIAAVED CEEEEEEECC >Mature Secondary Structure MHLKHLMIYNSGPTQELDLQPQFTADGLPKPLILVGLNGAGKTNVLSTIADAILELQVAA CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC GFNDILPNNKMGRRLFYRLLGGSTTSLNRSFEVSVATFKHAESSFSYRAQTGPVPETVIN CCHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCHHHHH KLETIAAFDVWNVEPAKEVIGDSAQLKNIFISDSYSFFPVNRNEDAWWQSLRMEQSEDVR HHHHHHHEECCCCCHHHHHHCCCHHHCEEEEECCCEEEECCCCCHHHHHHHHCCCCCCCH FAHRVNGELAKPVVLQTSFALLKPWIADVILDQAVDASMVLTMVSQPNSGRIADLMARAN HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHCC QGTLTAINTVFSTILRQQVFVTRDGRGAGASKLFLRDLTGSTVLRSLDSLSTGQAALAAI CCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHCCHHHHHHHHHHCCCCHHHHHHH FLNIIRYSDMGRPGIRLEEIAGISVIDEVDAHLHSELQTEVLPALMKLFPRVQFVATSHA HHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCC PLFALGMERVYGPAGYSLVELPSGLTISPERFGEFQRSFDYFTETKAFELLMREAAVAGK CHHHHHHHHHCCCCCCCCEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RPSVICEGETDPKYLQRAAELLGFDDFAANVDFDWIGSKEGGTAKNGGAGALDNAVRLFK CCCEEECCCCCHHHHHHHHHHHCCCHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEE CNPNLVAVPLALVYDCDQPGEDYTQTNFLVMRLPRNEANTVRKGGIENLLPPHVFEEEFF ECCCEEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHH ETKKIERGGDDKVITTTIALRKVAFCEHICARGDVKDFAQFEPIIDRLARFFGMPRSDPR HHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC AAVEIAAVED CEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA