Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120610042
Identifier: 120610042
GI number: 120610042
Start: 1483671
End: 1484015
Strand: Reverse
Name: 120610042
Synonym: Aave_1355
Alternate gene names: NA
Gene position: 1484015-1483671 (Counterclockwise)
Preceding gene: 120610043
Following gene: 120610033
Centisome position: 27.72
GC content: 73.91
Gene sequence:
>345_bases ATGGCACATCATCCCTTTTGTCTTCCCGCGCGCACGCTGCTGCGCGCAGCCGCCTTCTGCGCCGGCACCCTGCTGGCCGC CACGTCCGCCACCGCGCAGACGGCCGCCCCGGCGCCCCAAGGCGTGGGTACCGCAGCCCGGCCGGGCACGGGCGCATCGG ACAAGCAGCACGGCCGCACGCGTGCCGACGTGATCGCGGAACTGGCGTGCGCCCAGGCGTCCGGCGAACTGGAATCCATG GCGCTGCAGGGCTACGGCGTCGAAGGCCGCCCCATCGACCGCAGCGTTCCCGAATGCGCGCAGCAGCGCGTGCTCGCCTC GGGAGACACGGCGCAGCCCCGCTGA
Upstream 100 bases:
>100_bases GGCAGCGGCATTCCGTCGCGTTCTCCTGGCCCGCGCGAAGGCGGCCGCGCACAGTGAAGGCATGGAGAGCACGTCGCATT CTCCGCAGGAGCCCGGAACC
Downstream 100 bases:
>100_bases CCCGCCCCGCCCCCGGGGAGAGCGTCGCGCGGGCCGGCCCGGCGGGCGGACTCAGGCCGGAACGGGCACCAGGAAATCCC GGCTGATGCCCGCGCCCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MAHHPFCLPARTLLRAAAFCAGTLLAATSATAQTAAPAPQGVGTAARPGTGASDKQHGRTRADVIAELACAQASGELESM ALQGYGVEGRPIDRSVPECAQQRVLASGDTAQPR
Sequences:
>Translated_114_residues MAHHPFCLPARTLLRAAAFCAGTLLAATSATAQTAAPAPQGVGTAARPGTGASDKQHGRTRADVIAELACAQASGELESM ALQGYGVEGRPIDRSVPECAQQRVLASGDTAQPR >Mature_113_residues AHHPFCLPARTLLRAAAFCAGTLLAATSATAQTAAPAPQGVGTAARPGTGASDKQHGRTRADVIAELACAQASGELESMA LQGYGVEGRPIDRSVPECAQQRVLASGDTAQPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11581; Mature: 11450
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHHPFCLPARTLLRAAAFCAGTLLAATSATAQTAAPAPQGVGTAARPGTGASDKQHGRT CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH RADVIAELACAQASGELESMALQGYGVEGRPIDRSVPECAQQRVLASGDTAQPR HHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AHHPFCLPARTLLRAAAFCAGTLLAATSATAQTAAPAPQGVGTAARPGTGASDKQHGRT CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH RADVIAELACAQASGELESMALQGYGVEGRPIDRSVPECAQQRVLASGDTAQPR HHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA