Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is yjeS [H]
Identifier: 120609994
GI number: 120609994
Start: 1434112
End: 1435128
Strand: Direct
Name: yjeS [H]
Synonym: Aave_1307
Alternate gene names: 120609994
Gene position: 1434112-1435128 (Clockwise)
Preceding gene: 120609990
Following gene: 120609997
Centisome position: 26.79
GC content: 72.66
Gene sequence:
>1017_bases TTGATGCAATGGCTGGCCCAAGGGTTCCATGGGGACATGCACTACATGCAATCCCATGGACTCAAGCGCGCCCGGCCGGC GGAACTGGTGCCCGGCACCGTGAGCGTGATCACCGTGCGCATGGACTACCTGCCGCGGCAGACCCTGGCGCGCACCGCGG AGCGGGAGGGCTCGCCGGGCGGGTGGCAGGCGGCCGAACTGTCGCGGCTGGACAGGCCTCGGGAAGGCATCGTGTCCGTC TATGCCCGGGGCCGGGACTACCACAAGGTGCTGCGCGCGCGGCTGCAGAAGCTCGCCGACCGCATCGCCGGCGCGGTGGG GCCCTTCGGGCACCGCGTGTTCACTGATTCCGCGCCGGTGCTGGAGGCCGAACTCGCCCGCCGCAGCGGGCAGGGCTGGC GCGGCAAGCACACGCTGGTGCTGCACCGCGAAGCCGGCTCCATGTTCTTCCTGGGCGAGATCTACGTCGATCTGCCCCTG CCGCCCAGCGAGCCCGTCAGCGCGCACTGCGGCTCCTGCCAGGCGTGCATCGACGTCTGCCCGACGCGCGCCATCGTCGC GCCGCAGCGCGTGGATGCGCGGCGCTGCATCTCCTACCTCACCATCGAGCATGCCGGGCCCATTCCCGAAGCGCTCCGGC CCCTCATGGGCAACCGCGTCTATGGCTGCGACGATTGCCAGCTCGCCTGCCCGTGGAACAAGTTCGCCCAGCCCGCGCAG GTCCCCGACTTCGACGAGCGCCCGGGGCTCTCGGGGCGCCCGCTGGCCGAGTGGTTCGCCTGGGACGAGAGCACTTTCCT GCGCATGACCGAAGGCGGGCCGATCCGCCGCATCGGGCACGAGCGCTGGTTGCGCAACGTGGCCGTGGCGCTGGGCAATG CGCTGCGCGCCACGGGCGATCCGGCCCTGCGTGCGGCGCTGGCATCGCGCGCGAACGACCCGAGCCCCCTGGTGCGCGAG CACGTGGCCTGGGCCCTGGCGCAGGCGGCCGCCGGGGCGGAGCCGCCGCCCGCATGA
Upstream 100 bases:
>100_bases CAGCAGTCAACTCGTTCCTCAAATGCAAGGCTGGGCCCGCGAACTGGGATTTTCCCAAATTGGCGTCGCCGGCGTGGATT TGTCGTCGGCGGAGCCGGGG
Downstream 100 bases:
>100_bases GCGGACGGCGCGCAGCGTTCAGGGAGCGAGCCAGCCCAGCGCCAGCGGCAGGCTGAACACGCCCAGCACCGTGGACAGTG TCACCAGGCCCGCCACATAG
Product: putative iron-sulfur cluster-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MMQWLAQGFHGDMHYMQSHGLKRARPAELVPGTVSVITVRMDYLPRQTLARTAEREGSPGGWQAAELSRLDRPREGIVSV YARGRDYHKVLRARLQKLADRIAGAVGPFGHRVFTDSAPVLEAELARRSGQGWRGKHTLVLHREAGSMFFLGEIYVDLPL PPSEPVSAHCGSCQACIDVCPTRAIVAPQRVDARRCISYLTIEHAGPIPEALRPLMGNRVYGCDDCQLACPWNKFAQPAQ VPDFDERPGLSGRPLAEWFAWDESTFLRMTEGGPIRRIGHERWLRNVAVALGNALRATGDPALRAALASRANDPSPLVRE HVAWALAQAAAGAEPPPA
Sequences:
>Translated_338_residues MMQWLAQGFHGDMHYMQSHGLKRARPAELVPGTVSVITVRMDYLPRQTLARTAEREGSPGGWQAAELSRLDRPREGIVSV YARGRDYHKVLRARLQKLADRIAGAVGPFGHRVFTDSAPVLEAELARRSGQGWRGKHTLVLHREAGSMFFLGEIYVDLPL PPSEPVSAHCGSCQACIDVCPTRAIVAPQRVDARRCISYLTIEHAGPIPEALRPLMGNRVYGCDDCQLACPWNKFAQPAQ VPDFDERPGLSGRPLAEWFAWDESTFLRMTEGGPIRRIGHERWLRNVAVALGNALRATGDPALRAALASRANDPSPLVRE HVAWALAQAAAGAEPPPA >Mature_338_residues MMQWLAQGFHGDMHYMQSHGLKRARPAELVPGTVSVITVRMDYLPRQTLARTAEREGSPGGWQAAELSRLDRPREGIVSV YARGRDYHKVLRARLQKLADRIAGAVGPFGHRVFTDSAPVLEAELARRSGQGWRGKHTLVLHREAGSMFFLGEIYVDLPL PPSEPVSAHCGSCQACIDVCPTRAIVAPQRVDARRCISYLTIEHAGPIPEALRPLMGNRVYGCDDCQLACPWNKFAQPAQ VPDFDERPGLSGRPLAEWFAWDESTFLRMTEGGPIRRIGHERWLRNVAVALGNALRATGDPALRAALASRANDPSPLVRE HVAWALAQAAAGAEPPPA
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790608, Length=328, Percent_Identity=54.8780487804878, Blast_Score=356, Evalue=1e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004453 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013542 - InterPro: IPR009051 [H]
Pfam domain/function: PF08331 DUF1730 [H]
EC number: NA
Molecular weight: Translated: 37164; Mature: 37164
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQWLAQGFHGDMHYMQSHGLKRARPAELVPGTVSVITVRMDYLPRQTLARTAEREGSPG CCHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHCCHHHHHHHHHHCCCCC GWQAAELSRLDRPREGIVSVYARGRDYHKVLRARLQKLADRIAGAVGPFGHRVFTDSAPV CCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCH LEAELARRSGQGWRGKHTLVLHREAGSMFFLGEIYVDLPLPPSEPVSAHCGSCQACIDVC HHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHC PTRAIVAPQRVDARRCISYLTIEHAGPIPEALRPLMGNRVYGCDDCQLACPWNKFAQPAQ CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCHHHHCCCCC VPDFDERPGLSGRPLAEWFAWDESTFLRMTEGGPIRRIGHERWLRNVAVALGNALRATGD CCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC PALRAALASRANDPSPLVREHVAWALAQAAAGAEPPPA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MMQWLAQGFHGDMHYMQSHGLKRARPAELVPGTVSVITVRMDYLPRQTLARTAEREGSPG CCHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEEHHHCCHHHHHHHHHHCCCCC GWQAAELSRLDRPREGIVSVYARGRDYHKVLRARLQKLADRIAGAVGPFGHRVFTDSAPV CCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCH LEAELARRSGQGWRGKHTLVLHREAGSMFFLGEIYVDLPLPPSEPVSAHCGSCQACIDVC HHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHC PTRAIVAPQRVDARRCISYLTIEHAGPIPEALRPLMGNRVYGCDDCQLACPWNKFAQPAQ CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCHHHHCCCCC VPDFDERPGLSGRPLAEWFAWDESTFLRMTEGGPIRRIGHERWLRNVAVALGNALRATGD CCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC PALRAALASRANDPSPLVREHVAWALAQAAAGAEPPPA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]