Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609973
Identifier: 120609973
GI number: 120609973
Start: 1412080
End: 1413213
Strand: Reverse
Name: 120609973
Synonym: Aave_1286
Alternate gene names: NA
Gene position: 1413213-1412080 (Counterclockwise)
Preceding gene: 120609974
Following gene: 120609966
Centisome position: 26.4
GC content: 73.81
Gene sequence:
>1134_bases ATGCCGGGCCGCCCGACGCGCCGCGCCTGCCTCGCCGCAGCGGTCGGCGCCGCGTCCGCCAGCGCGTGGATGCCCTGGCC GGCACACGCGCTGCCCGCGCGTACCCTGGCGTTTCCGCGCGACCACGGCAGCCACCCGGACCTGCGCACCGAGTGGTGGT ACATCACCGGGCACGCCCATGCGGACGGCCGGGACTGGGGCTTCCAGATCACCTTCTTCCGCTCCCGGGTGGACGAGACC CGCACGCTGCGCTCCGCCTTCGCGGCCCACCAGTTGCTGTTCGCGCATGCCGCGCTCACCGACGTGCGCGGCGGCCGGCT GCTGCACGACCAGCGCATCGCGCGCGCGGGCTTCGGCGTGGCGCAGGCCCAGGAATCCGACACGTCCATCCGGATCGGGG ACTGGTCGCTGGCCCGCAGCGGCACGGCGGACGGTGGCAGCCGGTACGCGGCCCGCATTCCGGCGGAACGCTTCACCCTG GAACTGGAGTTCGACAGCACCCAGCCGCTGATTCTGCAGGGCCGCCAGGGCCTGTCGCGCAAGGGGCCCGAGCCGGAGCA GGCGAGCTACTACTACAGCCAGCCCCAGCTGGCGGTGCGCGGCACGATCGCGCTGCCGGGCAGGCGCCTTGCGATCGGCG GGGACGGCGCGAACAACAGCGGCGCCTCCCGCACGGCACGCGCCTGGCTGGACCACGAATGGAGCGAGGCCCTGATGCAC CCCGAGGCCGTGGGCTGGGACTGGATCGGCATGAACCTCGATGGCGGCGGCGCCCTCACCGCCTTCCGGCTGCGGCGCCA GGACGGCAGTGCGCTCTGGGCCAGCGGTTCGTTCCGCGCAGGTGCGAACGCCACGCTGCAGGTCTTCGAGCAGGCGGAGG CCATGGCCTTCACGCCCCTGCGCCACTGGACCAGCCCGCGCACCGGCACGCGCTATCCGGTGGCCTGGCGCATCGACACG CCCGCCGGCCGCTTCGGGGTGGATGCCCTGGCCGACGACCAGGAACTGGACAGCCGCGGCTCCACCGGCGCGATCTACTG GGAGGGCCTGAGCGTGCTGCGCGACGCTTCCGGCAGCGAGGTGGGCCGCGGCTACCTCGAACTGACGGGGTACGCAGGCG TGCTGCGACTGTGA
Upstream 100 bases:
>100_bases GCTACCTGCCCACCTACTTCGACGAGGCCTGGGTGGCCGGCACCATCGGCGACTGCGCGGCCGCGCGCGCCGGCATCCAG GCCAGCATGGACGCCTGACG
Downstream 100 bases:
>100_bases TGCCCGGACCTCTTGGGCAATCAAGCGCAAGCCCTGTTCAAGACGTCTGAATAACCGGAGCCTCACCCATCAGATGGCCG CGGAGCAGGCCACGCCGGCA
Product: secreted hydrolase-like protein
Products: NA
Alternate protein names: Secreted Hydrolase; Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; Hydroxyneurosporene Synthase; Attachment Protein; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Hydroxymethylglutaryl-Co A Reductase
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MPGRPTRRACLAAAVGAASASAWMPWPAHALPARTLAFPRDHGSHPDLRTEWWYITGHAHADGRDWGFQITFFRSRVDET RTLRSAFAAHQLLFAHAALTDVRGGRLLHDQRIARAGFGVAQAQESDTSIRIGDWSLARSGTADGGSRYAARIPAERFTL ELEFDSTQPLILQGRQGLSRKGPEPEQASYYYSQPQLAVRGTIALPGRRLAIGGDGANNSGASRTARAWLDHEWSEALMH PEAVGWDWIGMNLDGGGALTAFRLRRQDGSALWASGSFRAGANATLQVFEQAEAMAFTPLRHWTSPRTGTRYPVAWRIDT PAGRFGVDALADDQELDSRGSTGAIYWEGLSVLRDASGSEVGRGYLELTGYAGVLRL
Sequences:
>Translated_377_residues MPGRPTRRACLAAAVGAASASAWMPWPAHALPARTLAFPRDHGSHPDLRTEWWYITGHAHADGRDWGFQITFFRSRVDET RTLRSAFAAHQLLFAHAALTDVRGGRLLHDQRIARAGFGVAQAQESDTSIRIGDWSLARSGTADGGSRYAARIPAERFTL ELEFDSTQPLILQGRQGLSRKGPEPEQASYYYSQPQLAVRGTIALPGRRLAIGGDGANNSGASRTARAWLDHEWSEALMH PEAVGWDWIGMNLDGGGALTAFRLRRQDGSALWASGSFRAGANATLQVFEQAEAMAFTPLRHWTSPRTGTRYPVAWRIDT PAGRFGVDALADDQELDSRGSTGAIYWEGLSVLRDASGSEVGRGYLELTGYAGVLRL >Mature_376_residues PGRPTRRACLAAAVGAASASAWMPWPAHALPARTLAFPRDHGSHPDLRTEWWYITGHAHADGRDWGFQITFFRSRVDETR TLRSAFAAHQLLFAHAALTDVRGGRLLHDQRIARAGFGVAQAQESDTSIRIGDWSLARSGTADGGSRYAARIPAERFTLE LEFDSTQPLILQGRQGLSRKGPEPEQASYYYSQPQLAVRGTIALPGRRLAIGGDGANNSGASRTARAWLDHEWSEALMHP EAVGWDWIGMNLDGGGALTAFRLRRQDGSALWASGSFRAGANATLQVFEQAEAMAFTPLRHWTSPRTGTRYPVAWRIDTP AGRFGVDALADDQELDSRGSTGAIYWEGLSVLRDASGSEVGRGYLELTGYAGVLRL
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41125; Mature: 40994
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGRPTRRACLAAAVGAASASAWMPWPAHALPARTLAFPRDHGSHPDLRTEWWYITGHAH CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCEEEEEEEEEEE ADGRDWGFQITFFRSRVDETRTLRSAFAAHQLLFAHAALTDVRGGRLLHDQRIARAGFGV CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCH AQAQESDTSIRIGDWSLARSGTADGGSRYAARIPAERFTLELEFDSTQPLILQGRQGLSR HCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCHHHEEEEEEECCCCCEEEECCCCCCC KGPEPEQASYYYSQPQLAVRGTIALPGRRLAIGGDGANNSGASRTARAWLDHEWSEALMH CCCCCCCCCEEECCCCEEEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHCCCHHHHHCC PEAVGWDWIGMNLDGGGALTAFRLRRQDGSALWASGSFRAGANATLQVFEQAEAMAFTPL CCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHEECHH RHWTSPRTGTRYPVAWRIDTPAGRFGVDALADDQELDSRGSTGAIYWEGLSVLRDASGSE HHCCCCCCCCCCCEEEEECCCCCCCCCHHCCCCHHHHCCCCCCEEEECCHHHHHCCCCCC VGRGYLELTGYAGVLRL CCCCEEEEECCCEEECC >Mature Secondary Structure PGRPTRRACLAAAVGAASASAWMPWPAHALPARTLAFPRDHGSHPDLRTEWWYITGHAH CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCEEEEEEEEEEE ADGRDWGFQITFFRSRVDETRTLRSAFAAHQLLFAHAALTDVRGGRLLHDQRIARAGFGV CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCH AQAQESDTSIRIGDWSLARSGTADGGSRYAARIPAERFTLELEFDSTQPLILQGRQGLSR HCCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCHHHEEEEEEECCCCCEEEECCCCCCC KGPEPEQASYYYSQPQLAVRGTIALPGRRLAIGGDGANNSGASRTARAWLDHEWSEALMH CCCCCCCCCEEECCCCEEEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHCCCHHHHHCC PEAVGWDWIGMNLDGGGALTAFRLRRQDGSALWASGSFRAGANATLQVFEQAEAMAFTPL CCCCCCEEEEEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHEECHH RHWTSPRTGTRYPVAWRIDTPAGRFGVDALADDQELDSRGSTGAIYWEGLSVLRDASGSE HHCCCCCCCCCCCEEEEECCCCCCCCCHHCCCCHHHHCCCCCCEEEECCHHHHHCCCCCC VGRGYLELTGYAGVLRL CCCCEEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA