Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is accD [H]
Identifier: 120609900
GI number: 120609900
Start: 1335409
End: 1336281
Strand: Reverse
Name: accD [H]
Synonym: Aave_1213
Alternate gene names: 120609900
Gene position: 1336281-1335409 (Counterclockwise)
Preceding gene: 120609901
Following gene: 120609898
Centisome position: 24.96
GC content: 66.32
Gene sequence:
>873_bases ATGTCCTGGCTCGAAAAACTCCTGCCGTCCAAGATCCAGCAGTCCGACCCGACGGAGCGCCGCCAGGTGCCCGAGGGGCT GTGGATCAAGTGCCCGAGCTGCGAGACCGTGCTCTACAAGACCGACCTGGAGCACAACCAGAACGTCTGCCCGCATTGCA GCCACCACCACCGCATCAATGCCCGCGCGCGCCTCGACGCCTTCCTGGACGCGGAAGGCCGCTACGAGATCGGCCAGGAA GTGCTGCCGGTGGACGCGCTCAAGTTCAAGGACAGCCGCAAGTACACCGAACGCCTGAAGGAAGCGCTGGAAAATACCGG CGAGACCGACGCGCTGATCGTGATGGGCGGCTCGGTCAAGAGCATCAACGTCGTCGCGGCCTGCTTCGAGTTCGATTTCA TGGGCGGCTCCATGGGCAGTGTGGTGGGCGAGCGCTTCGTGCGCGGCGTGGAAACCGCCATCGAGCAGAAGGTGCCGTTC ATCTGCTTCACCGCCACCGGCGGCGCGCGCATGCAGGAAGGCCTGCTGTCGCTCATGCAGATGGCCAAGACCAATGCTGC GCTCACCCGGCTGGCCAAGAAAGGCCTGCCCTACATCAGCGTGCTGACCGACCCGACCATGGGCGGAGTCTCCGCCGGCT TCGCCTTCGTGGGCGACATCGTGATCGCCGAGCCCAAGGCGCTCATCGGCTTCGCGGGCCCGCGCGTGATCGAATCCACC GTGCGCGTGACGTTGCCGGAAGGCTTCCAGCGGGCCGAGTTCCTGCAGACCAAGGGCGCCGTGGACTTCATCTGCGACCG CCGCGAACTGCGCGACACCGTGGCCAGGAGCCTGGCCATGCTCCAGCGCCTGCCGGCCGACTCGGTCGCCTGA
Upstream 100 bases:
>100_bases ACGGCCCGGCCGAGCCGGTTCCGTGGCGTCCACTGGCCTGGGCCGCGCCGGTTTGAAGGTTGCGGCGCTGCGGTCTGCCA TTCATTTAGAGGAACACACC
Downstream 100 bases:
>100_bases GCCACCGCCACACAAAAAAAAGCCGCCGGCCCGGCAGGGGTGCGGCGGCTTTTTTGCGCCTATCGCATCACGGCGCCCTG CAGGTGGCCCAGCACGATCA
Product: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
Products: NA
Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSWLEKLLPSKIQQSDPTERRQVPEGLWIKCPSCETVLYKTDLEHNQNVCPHCSHHHRINARARLDAFLDAEGRYEIGQE VLPVDALKFKDSRKYTERLKEALENTGETDALIVMGGSVKSINVVAACFEFDFMGGSMGSVVGERFVRGVETAIEQKVPF ICFTATGGARMQEGLLSLMQMAKTNAALTRLAKKGLPYISVLTDPTMGGVSAGFAFVGDIVIAEPKALIGFAGPRVIEST VRVTLPEGFQRAEFLQTKGAVDFICDRRELRDTVARSLAMLQRLPADSVA
Sequences:
>Translated_290_residues MSWLEKLLPSKIQQSDPTERRQVPEGLWIKCPSCETVLYKTDLEHNQNVCPHCSHHHRINARARLDAFLDAEGRYEIGQE VLPVDALKFKDSRKYTERLKEALENTGETDALIVMGGSVKSINVVAACFEFDFMGGSMGSVVGERFVRGVETAIEQKVPF ICFTATGGARMQEGLLSLMQMAKTNAALTRLAKKGLPYISVLTDPTMGGVSAGFAFVGDIVIAEPKALIGFAGPRVIEST VRVTLPEGFQRAEFLQTKGAVDFICDRRELRDTVARSLAMLQRLPADSVA >Mature_289_residues SWLEKLLPSKIQQSDPTERRQVPEGLWIKCPSCETVLYKTDLEHNQNVCPHCSHHHRINARARLDAFLDAEGRYEIGQEV LPVDALKFKDSRKYTERLKEALENTGETDALIVMGGSVKSINVVAACFEFDFMGGSMGSVVGERFVRGVETAIEQKVPFI CFTATGGARMQEGLLSLMQMAKTNAALTRLAKKGLPYISVLTDPTMGGVSAGFAFVGDIVIAEPKALIGFAGPRVIESTV RVTLPEGFQRAEFLQTKGAVDFICDRRELRDTVARSLAMLQRLPADSVA
Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA [H
COG id: COG0777
COG function: function code I; Acetyl-CoA carboxylase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AccD/PCCB family [H]
Homologues:
Organism=Escherichia coli, GI1788655, Length=286, Percent_Identity=61.1888111888112, Blast_Score=355, Evalue=2e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000438 - InterPro: IPR000022 - InterPro: IPR011762 [H]
Pfam domain/function: PF01039 Carboxyl_trans [H]
EC number: =6.4.1.2 [H]
Molecular weight: Translated: 31909; Mature: 31778
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: PS50980 COA_CT_NTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWLEKLLPSKIQQSDPTERRQVPEGLWIKCPSCETVLYKTDLEHNQNVCPHCSHHHRIN CCHHHHHHHHHHHCCCCHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCC ARARLDAFLDAEGRYEIGQEVLPVDALKFKDSRKYTERLKEALENTGETDALIVMGGSVK HHHHHHHHHCCCCCHHHCCHHCCCHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCC SINVVAACFEFDFMGGSMGSVVGERFVRGVETAIEQKVPFICFTATGGARMQEGLLSLMQ HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH MAKTNAALTRLAKKGLPYISVLTDPTMGGVSAGFAFVGDIVIAEPKALIGFAGPRVIEST HHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHEECCHHHHCCCCHHHHHHH VRVTLPEGFQRAEFLQTKGAVDFICDRRELRDTVARSLAMLQRLPADSVA HEEECCCCHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SWLEKLLPSKIQQSDPTERRQVPEGLWIKCPSCETVLYKTDLEHNQNVCPHCSHHHRIN CHHHHHHHHHHHCCCCHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCC ARARLDAFLDAEGRYEIGQEVLPVDALKFKDSRKYTERLKEALENTGETDALIVMGGSVK HHHHHHHHHCCCCCHHHCCHHCCCHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCC SINVVAACFEFDFMGGSMGSVVGERFVRGVETAIEQKVPFICFTATGGARMQEGLLSLMQ HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH MAKTNAALTRLAKKGLPYISVLTDPTMGGVSAGFAFVGDIVIAEPKALIGFAGPRVIEST HHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHEECCHHHHCCCCHHHHHHH VRVTLPEGFQRAEFLQTKGAVDFICDRRELRDTVARSLAMLQRLPADSVA HEEECCCCHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA