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The map label for this gene is epsD [H]

Identifier: 120609897

GI number: 120609897

Start: 1332893

End: 1334014

Strand: Reverse

Name: epsD [H]

Synonym: Aave_1210

Alternate gene names: 120609897

Gene position: 1334014-1332893 (Counterclockwise)

Preceding gene: 120609898

Following gene: 120609896

Centisome position: 24.92

GC content: 70.41

Gene sequence:

>1122_bases
GTGAAAGTCCTGCAGGTCATCACCAAAGGCGAGACAGGGGGAGCGCAGAGCCATGTGCGCACACTGTGCGCCGCGCTCTC
CACGCAGGGGGTGGCAGTGCAGGCCGCCATCGGCGGAGCCGGCCCGCTTTCTCCCTTGGGCAGGTATCTGGAAACCCTGG
GCCTGCATGTGCATGGCATTCCCTTGCTGGACAACGGCTTGCGACCGGTCCGCCTCCTGCGGGCCACGCGTGATCTGCTC
CGCATCGTGCGAGCGGAGTCTCCGGACCTGCTGCACGCCCACAGCGCCATGGCGGGCGTCGCAGCGCGTATCGCCGGGGC
ATTGTCGGGTGTTCCCGTGATCTACACCGTGCACGGCTTCGCATTCAAGGCCGGCAATGCCTGGCCGCGCCGGGCGGTGG
CCTGGACCACCGAGGCGCTGCTGGCCCCGCTGACCAGCCGCATGGTCTGCGTCTCGGAACACGAGCGTGCCCTTGCGCGC
AGCCTGCCGCTGCCGAGCTGGCGCCTGGAGACCGTCGTGAACGGCGTTGACGACATCGCCGTTCCCGCCGATGCCACGGC
ATGGAAGCGCGAAGGCACTTCGGTCGCCATGGTCGCCCGCATGGCACCGCCGAAGCGGCACGACCTGCTGCTGCATGCCC
TGGCCCGGCTCAGGGACACGACCGGACAGCATGGCTCCGCCACGCTCCTGGGGGACGGCCCCGACAGGCCGGCCCACGAA
GCGCTGGCAGCCCGCCTCGGCCTGCAGTCGTCGGTCGATTTCAAGGGGGACGTGGACGACGTACCCGCGCAGCTCGCACG
CCACGGGATCTTCGTGCTCATGTCGGACCACGAAGGACTGCCCGTTTCGCTCATCGAGGCGATGCGTGCGGGCATGGCGA
TCGTGGCCAGCGATCTGCCTGGCGTGCGCGAGCTGCTGCCCGAACCCGGGCACGCCCTGCTCGTGCCCGCGGACCCGGAA
GCCCTCGCCGCTGCACTGCGACAATTGATGGAGTCCCCCGCGCTGCGCGCCCGGCTCGGCGCTGCCGCACGGCAGCGCTA
CGAACGGCACTACACCGCCGAGCGCATGGGGTCTGCGGTGCGCGACGTCTATGCCGCCGCCCTGCGGCGTTCCCGCTCCT
GA

Upstream 100 bases:

>100_bases
CTGCTGCGGCTCGAACTCGTGGGCGACGTGCTGGACCGCACGGGTATCGCGCCATGAGCAGGCTCCGCGCCATTCGGCCA
GCGCCCGGCATGCGTACGCC

Downstream 100 bases:

>100_bases
ATGGCATGAACAGCATTCCCCAACGCGAACTTGGCTCTTCCACGGCGCACCGGCAAGGCGCGCTGCTGCGCTGGTCGCTG
GCGGGAACGGTGACGCTGCT

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKVLQVITKGETGGAQSHVRTLCAALSTQGVAVQAAIGGAGPLSPLGRYLETLGLHVHGIPLLDNGLRPVRLLRATRDLL
RIVRAESPDLLHAHSAMAGVAARIAGALSGVPVIYTVHGFAFKAGNAWPRRAVAWTTEALLAPLTSRMVCVSEHERALAR
SLPLPSWRLETVVNGVDDIAVPADATAWKREGTSVAMVARMAPPKRHDLLLHALARLRDTTGQHGSATLLGDGPDRPAHE
ALAARLGLQSSVDFKGDVDDVPAQLARHGIFVLMSDHEGLPVSLIEAMRAGMAIVASDLPGVRELLPEPGHALLVPADPE
ALAAALRQLMESPALRARLGAAARQRYERHYTAERMGSAVRDVYAAALRRSRS

Sequences:

>Translated_373_residues
MKVLQVITKGETGGAQSHVRTLCAALSTQGVAVQAAIGGAGPLSPLGRYLETLGLHVHGIPLLDNGLRPVRLLRATRDLL
RIVRAESPDLLHAHSAMAGVAARIAGALSGVPVIYTVHGFAFKAGNAWPRRAVAWTTEALLAPLTSRMVCVSEHERALAR
SLPLPSWRLETVVNGVDDIAVPADATAWKREGTSVAMVARMAPPKRHDLLLHALARLRDTTGQHGSATLLGDGPDRPAHE
ALAARLGLQSSVDFKGDVDDVPAQLARHGIFVLMSDHEGLPVSLIEAMRAGMAIVASDLPGVRELLPEPGHALLVPADPE
ALAAALRQLMESPALRARLGAAARQRYERHYTAERMGSAVRDVYAAALRRSRS
>Mature_373_residues
MKVLQVITKGETGGAQSHVRTLCAALSTQGVAVQAAIGGAGPLSPLGRYLETLGLHVHGIPLLDNGLRPVRLLRATRDLL
RIVRAESPDLLHAHSAMAGVAARIAGALSGVPVIYTVHGFAFKAGNAWPRRAVAWTTEALLAPLTSRMVCVSEHERALAR
SLPLPSWRLETVVNGVDDIAVPADATAWKREGTSVAMVARMAPPKRHDLLLHALARLRDTTGQHGSATLLGDGPDRPAHE
ALAARLGLQSSVDFKGDVDDVPAQLARHGIFVLMSDHEGLPVSLIEAMRAGMAIVASDLPGVRELLPEPGHALLVPADPE
ALAAALRQLMESPALRARLGAAARQRYERHYTAERMGSAVRDVYAAALRRSRS

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17532709, Length=325, Percent_Identity=24.9230769230769, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24654571, Length=324, Percent_Identity=26.5432098765432, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 39645; Mature: 39645

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLQVITKGETGGAQSHVRTLCAALSTQGVAVQAAIGGAGPLSPLGRYLETLGLHVHGI
CCHHHEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCEEECC
PLLDNGLRPVRLLRATRDLLRIVRAESPDLLHAHSAMAGVAARIAGALSGVPVIYTVHGF
CHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECE
AFKAGNAWPRRAVAWTTEALLAPLTSRMVCVSEHERALARSLPLPSWRLETVVNGVDDIA
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHCC
VPADATAWKREGTSVAMVARMAPPKRHDLLLHALARLRDTTGQHGSATLLGDGPDRPAHE
CCCCCHHHHCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHH
ALAARLGLQSSVDFKGDVDDVPAQLARHGIFVLMSDHEGLPVSLIEAMRAGMAIVASDLP
HHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCHHEEHHCCC
GVRELLPEPGHALLVPADPEALAAALRQLMESPALRARLGAAARQRYERHYTAERMGSAV
CHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDVYAAALRRSRS
HHHHHHHHHHCCC
>Mature Secondary Structure
MKVLQVITKGETGGAQSHVRTLCAALSTQGVAVQAAIGGAGPLSPLGRYLETLGLHVHGI
CCHHHEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCEEECC
PLLDNGLRPVRLLRATRDLLRIVRAESPDLLHAHSAMAGVAARIAGALSGVPVIYTVHGF
CHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECE
AFKAGNAWPRRAVAWTTEALLAPLTSRMVCVSEHERALARSLPLPSWRLETVVNGVDDIA
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHCC
VPADATAWKREGTSVAMVARMAPPKRHDLLLHALARLRDTTGQHGSATLLGDGPDRPAHE
CCCCCHHHHCCCCCEEEHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHH
ALAARLGLQSSVDFKGDVDDVPAQLARHGIFVLMSDHEGLPVSLIEAMRAGMAIVASDLP
HHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCHHEEHHCCC
GVRELLPEPGHALLVPADPEALAAALRQLMESPALRARLGAAARQRYERHYTAERMGSAV
CHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDVYAAALRRSRS
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]