Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is fabH
Identifier: 120609871
GI number: 120609871
Start: 1303918
End: 1304895
Strand: Direct
Name: fabH
Synonym: Aave_1183
Alternate gene names: 120609871
Gene position: 1303918-1304895 (Clockwise)
Preceding gene: 120609870
Following gene: 120609872
Centisome position: 24.36
GC content: 68.61
Gene sequence:
>978_bases ATGAGCCGTTATTCCCGTATCACAGGCACCGGCAGCAGCCTGCCCCCGCGCCGTCTGACCAATGCCGACCTCGTGGCCGA ACTGGCCGGGCGGGGCGTTGAGACCTCGGACCAGTGGATCGTGGAGCGCACGGGCATCCGCGCCCGGCATTTCGCCGAGC GGGACGTGTGCAGCAGCGATCTGGGACTGGAGGCGGCGCGGCAGGCGCTCGATGCTGCGGGCGTGCAGCCTGCGGACATC GACCTCATCATCGTCGCCACGTCCACGCCGGACATGGTCTTCCCTTCCACTGCGTGCATCCTTCAGAACAAGCTGGGCGC CAATGGCTGCCCCGCATTCGACGTGCAGGCGGTGTGCAGCGGCTTCATCTATGCGCTGACGGTGGCGGATTCCATGATCC GCTCCGGCGCGGCCCGCCGCGCCCTCGTCGTGGGCTCCGAAGTGTTCAGCCGCCTGCTCGATTTCAACGACCGCACCACC TGCGTGCTGTTCGGCGACGGTGCGGGTGCGGTGGTCCTGGAGGCCTCCGAGACGCCGGGCATCCTCGCCAGCGACCTGCA CGCCGACGGCAGGCACGTCGGCATCCTGTGCGTACCGGGCAACGTGTACGGCGGCCAGATCCTCGGCGATCCGCTGCTCA AGATGGATGGCCAGGCCGTTTTCAAACTGGCCGTGGGGGTGCTCGACAAGGCGGCCCGCGCCGTGCTGGACAAGGCCGGC CTGAAGGAGTCGGACGTGGACTGGCTGATTCCCCACCAGGCCAACATCCGCATCATGCAGGGCACGGCCAAGAAGCTGGG CCTGCCGATGGACAGGGTGGTGGTCACGGTGGACCAGCACGGCAACACGTCGGCCGCATCCATTCCCCTGGCGCTCGACC ATGCCGTGCGCTCCGGCCAGGCCCGTCCCGGCCAGAACCTGCTGCTCGAAGGCGTGGGTGGGGGCTTCACCTGGGGCGCC GTGCTGCTCACGCTCTGA
Upstream 100 bases:
>100_bases TGCTCGATCGAGTCCGTTCGCGGGTTGCGCATGCCGCTCCCCTGCTGGGGCCCGCCGCCGCGCAGCCGTCGCCCTGACTG ACCGTTTCGGGCCCCAATGA
Downstream 100 bases:
>100_bases GTGCTGCCGCGGCCTGCGCCGAAGCACGGCCCCGGTGACTCGTATGACCTGAATTTCCCTCATGACCACGAAGAACTTCG CATTCGTTTTTCCCGGACAA
Product: 3-oxoacyl-(acyl carrier protein) synthase III
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSRYSRITGTGSSLPPRRLTNADLVAELAGRGVETSDQWIVERTGIRARHFAERDVCSSDLGLEAARQALDAAGVQPADI DLIIVATSTPDMVFPSTACILQNKLGANGCPAFDVQAVCSGFIYALTVADSMIRSGAARRALVVGSEVFSRLLDFNDRTT CVLFGDGAGAVVLEASETPGILASDLHADGRHVGILCVPGNVYGGQILGDPLLKMDGQAVFKLAVGVLDKAARAVLDKAG LKESDVDWLIPHQANIRIMQGTAKKLGLPMDRVVVTVDQHGNTSAASIPLALDHAVRSGQARPGQNLLLEGVGGGFTWGA VLLTL
Sequences:
>Translated_325_residues MSRYSRITGTGSSLPPRRLTNADLVAELAGRGVETSDQWIVERTGIRARHFAERDVCSSDLGLEAARQALDAAGVQPADI DLIIVATSTPDMVFPSTACILQNKLGANGCPAFDVQAVCSGFIYALTVADSMIRSGAARRALVVGSEVFSRLLDFNDRTT CVLFGDGAGAVVLEASETPGILASDLHADGRHVGILCVPGNVYGGQILGDPLLKMDGQAVFKLAVGVLDKAARAVLDKAG LKESDVDWLIPHQANIRIMQGTAKKLGLPMDRVVVTVDQHGNTSAASIPLALDHAVRSGQARPGQNLLLEGVGGGFTWGA VLLTL >Mature_324_residues SRYSRITGTGSSLPPRRLTNADLVAELAGRGVETSDQWIVERTGIRARHFAERDVCSSDLGLEAARQALDAAGVQPADID LIIVATSTPDMVFPSTACILQNKLGANGCPAFDVQAVCSGFIYALTVADSMIRSGAARRALVVGSEVFSRLLDFNDRTTC VLFGDGAGAVVLEASETPGILASDLHADGRHVGILCVPGNVYGGQILGDPLLKMDGQAVFKLAVGVLDKAARAVLDKAGL KESDVDWLIPHQANIRIMQGTAKKLGLPMDRVVVTVDQHGNTSAASIPLALDHAVRSGQARPGQNLLLEGVGGGFTWGAV LLTL
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family
Homologues:
Organism=Escherichia coli, GI1787333, Length=320, Percent_Identity=53.125, Blast_Score=328, Evalue=3e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FABH_ACIAC (A1TLD7)
Other databases:
- EMBL: CP000512 - RefSeq: YP_969549.1 - ProteinModelPortal: A1TLD7 - SMR: A1TLD7 - STRING: A1TLD7 - GeneID: 4667457 - GenomeReviews: CP000512_GR - KEGG: aav:Aave_1183 - NMPDR: fig|397945.5.peg.1033 - eggNOG: COG0332 - HOGENOM: HBG649927 - OMA: ATTTPDM - PhylomeDB: A1TLD7 - ProtClustDB: PRK09352 - BioCyc: AAVE397945:AAVE_1183-MONOMER - GO: GO:0005737 - HAMAP: MF_01815 - InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 - Gene3D: G3DSA:3.40.47.10 - TIGRFAMs: TIGR00747
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C; SSF53901 Thiolase-like
EC number: =2.3.1.41
Molecular weight: Translated: 34062; Mature: 33931
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: ACT_SITE 119-119 ACT_SITE 252-252 ACT_SITE 282-282
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYSRITGTGSSLPPRRLTNADLVAELAGRGVETSDQWIVERTGIRARHFAERDVCSSD CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHCCCC LGLEAARQALDAAGVQPADIDLIIVATSTPDMVFPSTACILQNKLGANGCPAFDVQAVCS CCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHH GFIYALTVADSMIRSGAARRALVVGSEVFSRLLDFNDRTTCVLFGDGAGAVVLEASETPG HHHHHHHHHHHHHHCCCHHEEEEECHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCC ILASDLHADGRHVGILCVPGNVYGGQILGDPLLKMDGQAVFKLAVGVLDKAARAVLDKAG CEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC LKESDVDWLIPHQANIRIMQGTAKKLGLPMDRVVVTVDQHGNTSAASIPLALDHAVRSGQ CCCCCCCEECCCCCCEEEEECCHHHHCCCHHHEEEEEECCCCCCCCCCCHHHHHHHHCCC ARPGQNLLLEGVGGGFTWGAVLLTL CCCCCCEEEEECCCCCEEHHHEEEC >Mature Secondary Structure SRYSRITGTGSSLPPRRLTNADLVAELAGRGVETSDQWIVERTGIRARHFAERDVCSSD CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHCCCC LGLEAARQALDAAGVQPADIDLIIVATSTPDMVFPSTACILQNKLGANGCPAFDVQAVCS CCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHH GFIYALTVADSMIRSGAARRALVVGSEVFSRLLDFNDRTTCVLFGDGAGAVVLEASETPG HHHHHHHHHHHHHHCCCHHEEEEECHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCC ILASDLHADGRHVGILCVPGNVYGGQILGDPLLKMDGQAVFKLAVGVLDKAARAVLDKAG CEEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC LKESDVDWLIPHQANIRIMQGTAKKLGLPMDRVVVTVDQHGNTSAASIPLALDHAVRSGQ CCCCCCCEECCCCCCEEEEECCHHHHCCCHHHEEEEEECCCCCCCCCCCHHHHHHHHCCC ARPGQNLLLEGVGGGFTWGAVLLTL CCCCCCEEEEECCCCCEEHHHEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA