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The map label for this gene is ypfJ [H]

Identifier: 120609835

GI number: 120609835

Start: 1260793

End: 1261683

Strand: Direct

Name: ypfJ [H]

Synonym: Aave_1147

Alternate gene names: 120609835

Gene position: 1260793-1261683 (Clockwise)

Preceding gene: 120609834

Following gene: 120609836

Centisome position: 23.55

GC content: 69.25

Gene sequence:

>891_bases
ATGAGATGGGAAGGCAATCGCGAATCGGACAACGTCGAGGACCGCCGTGACGAAGGCGGCGGCGGCGGTGGAGGCGGCTT
TCCGGTGTTCGGGGGACGCAGCATCGGCATCGGCACCATCGTCGTCGCGCTGATCGGCGGATGGGTGTTCGGCATCAATC
CCCTGACCATCCTCGGCCTGCTGAGCGGCGGCGGGCCGCCCGCCCACGTGCAGACCCAGCAGGCCCCGGCCCACCGGCCG
CCGGCGGACGACACCATGGGCCGGTTCGTTTCCACCGTGCTCGCGGACACCGAAGACGTCTGGGCCGATGTCTTCCGCCA
GAACGGCTCGACCTACCAGAACCCGCGGCTCGTCCTGTTCCGCGGCACCACGCCCACCGCCTGCGGCCGGGGCGAATCGG
CCATGGGCCCGTTCTACTGCCCGGCGGACCGCAAGGTCTATATCGACCTGGGTTTCTACGAGACGCTCAAGAACCGGCTC
GGCGCCCCGGGCGACTTCGCCCAGGCCTACGTGATCGCGCACGAAGTGGGCCACCACGTGCAGAACCTCCTGGGCATCAG
CGGCCGGGTGGACCAGATGCGCGGCCGGGTGAGCCAGGTGGAATACAACCATCTCTCCGTGCGCCTGGAACTGCAGGCCG
ACTGCTTCGCGGGCGTCTGGGCGCACCATGCGCAGAACGCGCGGCAGATCCTGGAGCAGGGCGACGTGGAAGAGGCCATG
AACGCCGCCGCCAGGATCGGCGACGACGCGCTGCAGCGCGCAGCGGGCCGAGCGGTCGTCCCGGACAGTTTCACCCACGG
CTCCAGCGCCCAGCGCCAGCGCTGGTTCCAGACCGGCCTGCAGGGCGGAAGCATCAAGGCCTGCGATACCTTCTCTGTCA
GGAGCCTTTGA

Upstream 100 bases:

>100_bases
CGACGCCGGATGGGCGCCGTCCGCCGGCCTCGAGGCCCGCTGAGACCACCCCGGCCGGCGTACCATCACGCACTGGCATG
GATTTTTCAGGGTGCGCACG

Downstream 100 bases:

>100_bases
ATCCAAGGGTTTGCTGCTATTGAAAATGCAGCAAAAAATGCCACCCCGCCGGCCGTGCGGACGTTCCCGTGGCCTCGGGG
AAGGGCTGGTGCGACAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MRWEGNRESDNVEDRRDEGGGGGGGGFPVFGGRSIGIGTIVVALIGGWVFGINPLTILGLLSGGGPPAHVQTQQAPAHRP
PADDTMGRFVSTVLADTEDVWADVFRQNGSTYQNPRLVLFRGTTPTACGRGESAMGPFYCPADRKVYIDLGFYETLKNRL
GAPGDFAQAYVIAHEVGHHVQNLLGISGRVDQMRGRVSQVEYNHLSVRLELQADCFAGVWAHHAQNARQILEQGDVEEAM
NAAARIGDDALQRAAGRAVVPDSFTHGSSAQRQRWFQTGLQGGSIKACDTFSVRSL

Sequences:

>Translated_296_residues
MRWEGNRESDNVEDRRDEGGGGGGGGFPVFGGRSIGIGTIVVALIGGWVFGINPLTILGLLSGGGPPAHVQTQQAPAHRP
PADDTMGRFVSTVLADTEDVWADVFRQNGSTYQNPRLVLFRGTTPTACGRGESAMGPFYCPADRKVYIDLGFYETLKNRL
GAPGDFAQAYVIAHEVGHHVQNLLGISGRVDQMRGRVSQVEYNHLSVRLELQADCFAGVWAHHAQNARQILEQGDVEEAM
NAAARIGDDALQRAAGRAVVPDSFTHGSSAQRQRWFQTGLQGGSIKACDTFSVRSL
>Mature_296_residues
MRWEGNRESDNVEDRRDEGGGGGGGGFPVFGGRSIGIGTIVVALIGGWVFGINPLTILGLLSGGGPPAHVQTQQAPAHRP
PADDTMGRFVSTVLADTEDVWADVFRQNGSTYQNPRLVLFRGTTPTACGRGESAMGPFYCPADRKVYIDLGFYETLKNRL
GAPGDFAQAYVIAHEVGHHVQNLLGISGRVDQMRGRVSQVEYNHLSVRLELQADCFAGVWAHHAQNARQILEQGDVEEAM
NAAARIGDDALQRAAGRAVVPDSFTHGSSAQRQRWFQTGLQGGSIKACDTFSVRSL

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=293, Percent_Identity=52.901023890785, Blast_Score=294, Evalue=4e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31860; Mature: 31860

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWEGNRESDNVEDRRDEGGGGGGGGFPVFGGRSIGIGTIVVALIGGWVFGINPLTILGL
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
LSGGGPPAHVQTQQAPAHRPPADDTMGRFVSTVLADTEDVWADVFRQNGSTYQNPRLVLF
HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCEEEEE
RGTTPTACGRGESAMGPFYCPADRKVYIDLGFYETLKNRLGAPGDFAQAYVIAHEVGHHV
ECCCCCCCCCCCCCCCCEECCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
QNLLGISGRVDQMRGRVSQVEYNHLSVRLELQADCFAGVWAHHAQNARQILEQGDVEEAM
HHHHCCCCCHHHHHCHHHHEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHH
NAAARIGDDALQRAAGRAVVPDSFTHGSSAQRQRWFQTGLQGGSIKACDTFSVRSL
HHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MRWEGNRESDNVEDRRDEGGGGGGGGFPVFGGRSIGIGTIVVALIGGWVFGINPLTILGL
CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
LSGGGPPAHVQTQQAPAHRPPADDTMGRFVSTVLADTEDVWADVFRQNGSTYQNPRLVLF
HCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCEEEEE
RGTTPTACGRGESAMGPFYCPADRKVYIDLGFYETLKNRLGAPGDFAQAYVIAHEVGHHV
ECCCCCCCCCCCCCCCCEECCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
QNLLGISGRVDQMRGRVSQVEYNHLSVRLELQADCFAGVWAHHAQNARQILEQGDVEEAM
HHHHCCCCCHHHHHCHHHHEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHH
NAAARIGDDALQRAAGRAVVPDSFTHGSSAQRQRWFQTGLQGGSIKACDTFSVRSL
HHHHHCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]