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The map label for this gene is med [H]

Identifier: 120609825

GI number: 120609825

Start: 1246871

End: 1248037

Strand: Direct

Name: med [H]

Synonym: Aave_1135

Alternate gene names: 120609825

Gene position: 1246871-1248037 (Clockwise)

Preceding gene: 120609824

Following gene: 120609826

Centisome position: 23.29

GC content: 67.35

Gene sequence:

>1167_bases
ATGACCGATCTGCACAAGCGCTCGCTGATGAAGGCCGCCGCGCTTTCCGCCCTGGCCGCCGCCGCGCTCGCGGGCTGCGG
CAAGAAGGACGAGCCGGCACCTGCGCAGGCACCCGCGTCCGCGCCCGCCGCCTCGGCCCCCGCGGCCAAGGCCGAGCCGC
TGAAGATCGCGTTCGCCTACGTCGGCCCGGTGGGCGACGGCGGCTGGTCGTTCGCGCACGACAACGGCCGCAAGGCCATC
GAGAAGGAATTCGGCGACAAGGTCGTCACCAGCTTCGTCGAGAGCGTGCCCGAGTCGGCCGATGCCGAGCGCGTGCTGCG
CGACATGGCCGGCCAGGGCAACAAGCTGATCTTCGGCACCACCTTCGGCTACATGGAGACGATCCAGAAGATCGCCCCCG
ACTTCCCCGACGTGAAGTTCGAGCACGCCACCGGCTACAAGACCGCGCCCAACGTGCGCACCTACGACAGCCGCACCTAC
GAAGGCGCCTACATGGCCGGCGTGATCGCGGGCGCCATGACCAAGTCGAACACCCTGGGCGTGGTCGGCTCGGTGCCGAT
CCCCGAGGTGATCCGCAACATCAACAGCTTCACGCTGGGCGCGCAGTCGGTGAACCCGAACGTCAAGACCAAGGTGGTGT
GGGTGAACGAATGGTTCAGCCCGCCGAAGGAAACCGAAGCCGCCACCTCGCTGATCAACGGTGGCGCCGACGTGCTGTTC
CAGAACACCGATTCGCCCGCCGTGCTCAAGACCGCGCAGGAAAAGGGCAAGCGCGCCTTCGGCTGGGACAGCGATATGAC
CGCCTACGGCCCCAAGGCCCACCTGGGCTCGGCCGTGATCAACTGGGGCCCGTACTACGTGAAGGCCACGCGCGACGTGC
TCGAAGGCAAGTGGACCACCGGCCAGAGCTGGTGGGGCGTGAAGGAAGGCGCGATCGACCTCGTCTCCATCGCCGACGAC
GTGCCCGCCGAGACCAGGGCCAAGGTGGACCAGGTCAAGGCCGGCCTGAAGGACGGTTCGTTCGCGATCTGGAAGGGCCC
GATCCTCGGCCAGGACGGCAAGGAACTGCTCGCCAAGGACGTGGTCGCCGACGACAAGTTCCTCTCCGGCATCAACTTCT
ACGTCAAGGGCGTGGAAGGCACCGTGCCGGGCGGCGACAAGAAGTGA

Upstream 100 bases:

>100_bases
ATCCCGGGGGCTGACCGGGGCGCCGCGCCGTGCCATCATTGCCGTTTCCAAACGTTTCCGATTTCTTCTCTCACCTGTTT
CCCCTGGAAGGACATTCGAC

Downstream 100 bases:

>100_bases
TCCGCGGGGCTCGCCCCGATGGTGAAAGGGCCGCCCATGGGCGGCCCTTTTTCGTCAGCGCTCCAGCACCCGGCCCGGCC
GCGATCCCGTCGGCTCCCGG

Product: basic membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MTDLHKRSLMKAAALSALAAAALAGCGKKDEPAPAQAPASAPAASAPAAKAEPLKIAFAYVGPVGDGGWSFAHDNGRKAI
EKEFGDKVVTSFVESVPESADAERVLRDMAGQGNKLIFGTTFGYMETIQKIAPDFPDVKFEHATGYKTAPNVRTYDSRTY
EGAYMAGVIAGAMTKSNTLGVVGSVPIPEVIRNINSFTLGAQSVNPNVKTKVVWVNEWFSPPKETEAATSLINGGADVLF
QNTDSPAVLKTAQEKGKRAFGWDSDMTAYGPKAHLGSAVINWGPYYVKATRDVLEGKWTTGQSWWGVKEGAIDLVSIADD
VPAETRAKVDQVKAGLKDGSFAIWKGPILGQDGKELLAKDVVADDKFLSGINFYVKGVEGTVPGGDKK

Sequences:

>Translated_388_residues
MTDLHKRSLMKAAALSALAAAALAGCGKKDEPAPAQAPASAPAASAPAAKAEPLKIAFAYVGPVGDGGWSFAHDNGRKAI
EKEFGDKVVTSFVESVPESADAERVLRDMAGQGNKLIFGTTFGYMETIQKIAPDFPDVKFEHATGYKTAPNVRTYDSRTY
EGAYMAGVIAGAMTKSNTLGVVGSVPIPEVIRNINSFTLGAQSVNPNVKTKVVWVNEWFSPPKETEAATSLINGGADVLF
QNTDSPAVLKTAQEKGKRAFGWDSDMTAYGPKAHLGSAVINWGPYYVKATRDVLEGKWTTGQSWWGVKEGAIDLVSIADD
VPAETRAKVDQVKAGLKDGSFAIWKGPILGQDGKELLAKDVVADDKFLSGINFYVKGVEGTVPGGDKK
>Mature_387_residues
TDLHKRSLMKAAALSALAAAALAGCGKKDEPAPAQAPASAPAASAPAAKAEPLKIAFAYVGPVGDGGWSFAHDNGRKAIE
KEFGDKVVTSFVESVPESADAERVLRDMAGQGNKLIFGTTFGYMETIQKIAPDFPDVKFEHATGYKTAPNVRTYDSRTYE
GAYMAGVIAGAMTKSNTLGVVGSVPIPEVIRNINSFTLGAQSVNPNVKTKVVWVNEWFSPPKETEAATSLINGGADVLFQ
NTDSPAVLKTAQEKGKRAFGWDSDMTAYGPKAHLGSAVINWGPYYVKATRDVLEGKWTTGQSWWGVKEGAIDLVSIADDV
PAETRAKVDQVKAGLKDGSFAIWKGPILGQDGKELLAKDVVADDKFLSGINFYVKGVEGTVPGGDKK

Specific function: Positive activator of the comK gene [H]

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BMP lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003760 [H]

Pfam domain/function: PF02608 Bmp [H]

EC number: NA

Molecular weight: Translated: 41104; Mature: 40973

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLHKRSLMKAAALSALAAAALAGCGKKDEPAPAQAPASAPAASAPAAKAEPLKIAFAY
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
VGPVGDGGWSFAHDNGRKAIEKEFGDKVVTSFVESVPESADAERVLRDMAGQGNKLIFGT
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEE
TFGYMETIQKIAPDFPDVKFEHATGYKTAPNVRTYDSRTYEGAYMAGVIAGAMTKSNTLG
CHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCE
VVGSVPIPEVIRNINSFTLGAQSVNPNVKTKVVWVNEWFSPPKETEAATSLINGGADVLF
EEECCCHHHHHHCCCHHEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCEEEE
QNTDSPAVLKTAQEKGKRAFGWDSDMTAYGPKAHLGSAVINWGPYYVKATRDVLEGKWTT
ECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCEEECCCCEEEEEHHHHHCCCCCC
GQSWWGVKEGAIDLVSIADDVPAETRAKVDQVKAGLKDGSFAIWKGPILGQDGKELLAKD
CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHH
VVADDKFLSGINFYVKGVEGTVPGGDKK
HHCCHHHHCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TDLHKRSLMKAAALSALAAAALAGCGKKDEPAPAQAPASAPAASAPAAKAEPLKIAFAY
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
VGPVGDGGWSFAHDNGRKAIEKEFGDKVVTSFVESVPESADAERVLRDMAGQGNKLIFGT
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEEE
TFGYMETIQKIAPDFPDVKFEHATGYKTAPNVRTYDSRTYEGAYMAGVIAGAMTKSNTLG
CHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCE
VVGSVPIPEVIRNINSFTLGAQSVNPNVKTKVVWVNEWFSPPKETEAATSLINGGADVLF
EEECCCHHHHHHCCCHHEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCEEEE
QNTDSPAVLKTAQEKGKRAFGWDSDMTAYGPKAHLGSAVINWGPYYVKATRDVLEGKWTT
ECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCEEECCCCEEEEEHHHHHCCCCCC
GQSWWGVKEGAIDLVSIADDVPAETRAKVDQVKAGLKDGSFAIWKGPILGQDGKELLAKD
CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHH
VVADDKFLSGINFYVKGVEGTVPGGDKK
HHCCHHHHCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9335269; 9384377 [H]