Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is ttuD [H]
Identifier: 120609804
GI number: 120609804
Start: 1218718
End: 1220064
Strand: Direct
Name: ttuD [H]
Synonym: Aave_1113
Alternate gene names: 120609804
Gene position: 1218718-1220064 (Clockwise)
Preceding gene: 120609799
Following gene: 120609807
Centisome position: 22.77
GC content: 74.91
Gene sequence:
>1347_bases ATGACACTGCCCGCCCTGCCGCCTGCATCTGCCCCGTCGCCCGCGCCGGATCCCGCCGCAGATCCCACGCGCTTCCTGCG CCACCTCTATGGCGTGGCCGTGCAGGCGGCCCTGCCCTCGGTGCGCCTGGCCGCGCACCTGCCCGCGCCGCCGCGGGGCC GCACGCTGGTGCTGGGGGCCGGCAAGGCCGGGGCCTCGATGGTGCATGCGCTGGAGGCGCTGTGGCCGGCCGAAGCGCCG CTCTCCGGTCTGGTCGTGACGCGCTACGGCCATGTGCCGCCGCGGCCTGCGGGCACGCCTGGGCGCATCGAGATCGTGGA GGCCGCGCACCCGGTGCCGGACGCAGCGGGCGAGGCGGTGGCGCGGCGCATGCTGGAACTGGCGCAGGGGCTCACCGCCG ACGACCTCGTGATCTGCCTGATCTCGGGCGGCGGCTCCGCACTGCTCACGCTGCCGGCCGAGGGCCTGGCGCTGGAGGAC AAGCAGCGCATCCACCGGGCCCTGTTGGAAAGCGGTGCGGGCATTGCGGACATGAACTGCGTGCGCCGGCACCTCTCGCG CATCAAAGGCGGGCGGCTGGCCTCGGCCTGCGCGCCCGCGCGCGTCGTGACGCTCGCGATCAGCGACGTGCCGGGCGACG ATCCGGCAGTGATCGCAAGCGGCCCCACGGTGCCGGACGCGACGACCTGCGCCGATGCGCTGCGCATCCTGGACCGCCAT GGCATCGGCCTGCCACCGGCCGTGCGCGCGGCGCTGGAGGCCGGTACGCTGGAAACGCCCAAGCCTTTGCCGGGCGAGAC GCCGGAGGTGCACCTGATCGCCACGCCGCTCCAGTCGCTGGAAGCCGCGGCCGCGGCGGCCCGCTCCGCGGGCCTGGCGG TGCATGTCCTGTCGGACGAGATGGAAGGCGAATCCCGTGAGGTGGGTGCCGTGCATGCCGCGCTGGCCCGCTCGGTGGCG CGCCACGGTACGCCGTTCGCGCGGCCCTGCGTCATCCTCTCGGGCGGCGAGACCACGGTGACGGTGCGCGAGCGCCCGCC GGGCAGCGCGCGCGGACGGGGCGGGCGCGCCGGGGAGTTCTGCCTGGGGCTGGCGCGCGCGCTGCAGGGCCAGGAGGGCG TGTGGGCGCTGGCGGCCGATACCGACGGCATCGACGGCGTGGAGGACAACGCCGGTGCGCAGGTAGCGCCCGACACGCTC GCCCGCGCAGCCGCGGCGGGCCTGCGCGTGGACGATCATTTGGCGCGCAACGACGCCTACGGCTTTTTTGCAGCGCTCGG CGATCTGGTCGTCACCGGGCCGACGCATACGAACGTGAACGACTTCCGCGCCCTGCTCATACGCTAG
Upstream 100 bases:
>100_bases GATTTTGTATGCAGTTTTTGTGCACCATAAGCGGGATCGGCATCGGGGCATACCCGCACCGGGGCGGTGCGCCGGGGCCG CCTTGCGCCAGAATCCGCGC
Downstream 100 bases:
>100_bases AACAGGGCTCGCCAGGGATCAGTACCCGAGCGTGCGCCCATCCGGATTGCGCGGATCGGAATAACCGAAAAGCACGCCGT CCTTGAGCTGGATGGTCTGC
Product: hydroxypyruvate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MTLPALPPASAPSPAPDPAADPTRFLRHLYGVAVQAALPSVRLAAHLPAPPRGRTLVLGAGKAGASMVHALEALWPAEAP LSGLVVTRYGHVPPRPAGTPGRIEIVEAAHPVPDAAGEAVARRMLELAQGLTADDLVICLISGGGSALLTLPAEGLALED KQRIHRALLESGAGIADMNCVRRHLSRIKGGRLASACAPARVVTLAISDVPGDDPAVIASGPTVPDATTCADALRILDRH GIGLPPAVRAALEAGTLETPKPLPGETPEVHLIATPLQSLEAAAAAARSAGLAVHVLSDEMEGESREVGAVHAALARSVA RHGTPFARPCVILSGGETTVTVRERPPGSARGRGGRAGEFCLGLARALQGQEGVWALAADTDGIDGVEDNAGAQVAPDTL ARAAAAGLRVDDHLARNDAYGFFAALGDLVVTGPTHTNVNDFRALLIR
Sequences:
>Translated_448_residues MTLPALPPASAPSPAPDPAADPTRFLRHLYGVAVQAALPSVRLAAHLPAPPRGRTLVLGAGKAGASMVHALEALWPAEAP LSGLVVTRYGHVPPRPAGTPGRIEIVEAAHPVPDAAGEAVARRMLELAQGLTADDLVICLISGGGSALLTLPAEGLALED KQRIHRALLESGAGIADMNCVRRHLSRIKGGRLASACAPARVVTLAISDVPGDDPAVIASGPTVPDATTCADALRILDRH GIGLPPAVRAALEAGTLETPKPLPGETPEVHLIATPLQSLEAAAAAARSAGLAVHVLSDEMEGESREVGAVHAALARSVA RHGTPFARPCVILSGGETTVTVRERPPGSARGRGGRAGEFCLGLARALQGQEGVWALAADTDGIDGVEDNAGAQVAPDTL ARAAAAGLRVDDHLARNDAYGFFAALGDLVVTGPTHTNVNDFRALLIR >Mature_447_residues TLPALPPASAPSPAPDPAADPTRFLRHLYGVAVQAALPSVRLAAHLPAPPRGRTLVLGAGKAGASMVHALEALWPAEAPL SGLVVTRYGHVPPRPAGTPGRIEIVEAAHPVPDAAGEAVARRMLELAQGLTADDLVICLISGGGSALLTLPAEGLALEDK QRIHRALLESGAGIADMNCVRRHLSRIKGGRLASACAPARVVTLAISDVPGDDPAVIASGPTVPDATTCADALRILDRHG IGLPPAVRAALEAGTLETPKPLPGETPEVHLIATPLQSLEAAAAAARSAGLAVHVLSDEMEGESREVGAVHAALARSVAR HGTPFARPCVILSGGETTVTVRERPPGSARGRGGRAGEFCLGLARALQGQEGVWALAADTDGIDGVEDNAGAQVAPDTLA RAAAAGLRVDDHLARNDAYGFFAALGDLVVTGPTHTNVNDFRALLIR
Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]
COG id: COG2379
COG function: function code G; Putative glycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31543063, Length=490, Percent_Identity=34.0816326530612, Blast_Score=176, Evalue=5e-44, Organism=Caenorhabditis elegans, GI193205461, Length=383, Percent_Identity=30.8093994778068, Blast_Score=139, Evalue=4e-33, Organism=Drosophila melanogaster, GI19920578, Length=392, Percent_Identity=33.1632653061224, Blast_Score=135, Evalue=6e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007835 [H]
Pfam domain/function: PF05161 MOFRL [H]
EC number: =1.1.1.81 [H]
Molecular weight: Translated: 45737; Mature: 45605
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPALPPASAPSPAPDPAADPTRFLRHLYGVAVQAALPSVRLAAHLPAPPRGRTLVLGA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEC GKAGASMVHALEALWPAEAPLSGLVVTRYGHVPPRPAGTPGRIEIVEAAHPVPDAAGEAV CCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHH ARRMLELAQGLTADDLVICLISGGGSALLTLPAEGLALEDKQRIHRALLESGAGIADMNC HHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHH VRRHLSRIKGGRLASACAPARVVTLAISDVPGDDPAVIASGPTVPDATTCADALRILDRH HHHHHHHCCCCCHHHHCCCCEEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHC GIGLPPAVRAALEAGTLETPKPLPGETPEVHLIATPLQSLEAAAAAARSAGLAVHVLSDE CCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCEEEEEECCC MEGESREVGAVHAALARSVARHGTPFARPCVILSGGETTVTVRERPPGSARGRGGRAGEF CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCHHHH CLGLARALQGQEGVWALAADTDGIDGVEDNAGAQVAPDTLARAAAAGLRVDDHLARNDAY HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEECHHHHHHHHHHCCCCHHHHHHCCCH GFFAALGDLVVTGPTHTNVNDFRALLIR HHHHHHCCEEEECCCCCCHHHHHHHCCC >Mature Secondary Structure TLPALPPASAPSPAPDPAADPTRFLRHLYGVAVQAALPSVRLAAHLPAPPRGRTLVLGA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEC GKAGASMVHALEALWPAEAPLSGLVVTRYGHVPPRPAGTPGRIEIVEAAHPVPDAAGEAV CCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHH ARRMLELAQGLTADDLVICLISGGGSALLTLPAEGLALEDKQRIHRALLESGAGIADMNC HHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHH VRRHLSRIKGGRLASACAPARVVTLAISDVPGDDPAVIASGPTVPDATTCADALRILDRH HHHHHHHCCCCCHHHHCCCCEEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHC GIGLPPAVRAALEAGTLETPKPLPGETPEVHLIATPLQSLEAAAAAARSAGLAVHVLSDE CCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCEEEEEECCC MEGESREVGAVHAALARSVARHGTPFARPCVILSGGETTVTVRERPPGSARGRGGRAGEF CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCHHHH CLGLARALQGQEGVWALAADTDGIDGVEDNAGAQVAPDTLARAAAAGLRVDDHLARNDAY HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEECHHHHHHHHHHCCCCHHHHHHCCCH GFFAALGDLVVTGPTHTNVNDFRALLIR HHHHHHCCEEEECCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7592429 [H]