Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609777
Identifier: 120609777
GI number: 120609777
Start: 1189199
End: 1190215
Strand: Direct
Name: 120609777
Synonym: Aave_1085
Alternate gene names: NA
Gene position: 1189199-1190215 (Clockwise)
Preceding gene: 120609772
Following gene: 120609779
Centisome position: 22.22
GC content: 69.71
Gene sequence:
>1017_bases ATGACTTCTGCCACCATCCCCGGCACGGCGGCCGACCACTCCGGCGTCCAGGAAGAGCTCTCCCGCGAGGCCCGCATGGG CGGCCTGGGCGAGGAGACGCGCGAACGCGAGGTACGCTGCATCGACATCTCGGATTTCGAGCGCCGCAAGGAAGAGATCG CCGAACAGCTCTGGAGCGCGTCCGTCGATATCGGCTTCTTCCAGGTGTCCCGCCACGGCATTCCCATCGAGGACATCCGC GCGGCCTTCGCGCGGGCCGAGGCCTTCTTCGCGCTGCCGCGCGAGACCAAGGCGCAGTGGCCGCTCGCACGCAACGCGGG CTGGGAGCACAAGGCGCAGATCCGCCCTTCCACCCGCACGCCGGACCAGAAGGAGTCCTACCAGGTCACGCGCCCGCGCA TGGAGGGCCTCTGGCCCACGGAAGAGGAGCTGCCGGGCTTCCGCGCGGCGACGCTGGCCTTCGAGCGCCAGTGCTGGGAG GTGGGCATGCGCCTGCTCTCGTGCTTCGCGTGGAAGCTGGGATTCGACGACGCGTTCTTCACCCGCGCGCACGATCCGTC CGTGCCCGCCTACCAGAGCACGCTGCGCATGCTGCATTACTTCGCGGTGGACCCGGCGCTGAAGGACGAGCTGGGGCTCT GGCGCGCGGGCGCGCACACCGATTTCGACTGCCTGACGCTGCTGTTCCAGCGGCCGGGGCAGGGCGGGCTGCAGGTGCTG CCCGGCAAGGAGATGGAGGGCCGCCGCTGGACGCCCGTGGAGCCGGCGGAAGGCGTGATCACCTGCAACATCGGCGACAT GCTCACGCGCTGGAGCGACGACGTGCTGCCCAGCAACTTCCACCGGGTGCGCAATCCGGTGCCGCACGAGTACCAGGGAG CGCGCTACAGCCTGGCGTTCTTCTGCCAGGCCAACGAGGACGCGGTGATCGCGGGCCCGGCGGGCACGCACCCGCCGATC ACGGCGGGCGAGTACCTGAAGCAGCGCATCAGCGCGAACTTCTCCAACCGCTACTGA
Upstream 100 bases:
>100_bases CCGCCTTTTCCCACTTCAAGGGCCCGCGCCGCGCGCCATGGACGGTGACCATGGCCGCGCCTTCACGGCCCTTGCATGCT GCAACGACAAGGAAACCACC
Downstream 100 bases:
>100_bases CGGCAGCGGGGGCGGTCAGCGCGCGCCCCGCTGGGGAGCGCGCGGGCCGCGGCCTTCGATGTGCCGGAAGGTGAGCCGGC CCTTGTTGAGGTCATAGGGG
Product: 2OG-Fe(II) oxygenase
Products: NA
Alternate protein names: Oxidoreductase; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Oxidoreductase 2OG-Fe(II) Oxygenase Family; 2OG-Fe(II) Oxygenase Superfamily Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; Isopenicillin N Synthase; Flavonol Synthase/Dioxygenase; 2og-Fe(Ii) Oxygenase; Oxygenase; 2-Oxobutyrate Oxidase; Iron/Ascorbate Oxidoreductase Family Protein; Oxidoreductase Iron/Ascorbate Family Protein; 2OG-Fe(II) Oxygenase Superfamily Dioxygenase; 1-Aminocyclopropane-1-Carboxylate Oxidase; Oxidoreductase Iron/Ascorbate Family; 2OG-Fe(II) Oxygenase Family Protein; Fe-Containing Oxidoreductase; Isopenicillin-N Synthase; Dioxygenase; Isopenicillin N Synthase And Related Dioxygenases; Oxidoreductase 2og-Fe(Ii) Oxygenase Family; Oxygenase/Oxidoreductase; Iron/Ascorbate-Dependent Oxidoreductase Family Protein
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTSATIPGTAADHSGVQEELSREARMGGLGEETREREVRCIDISDFERRKEEIAEQLWSASVDIGFFQVSRHGIPIEDIR AAFARAEAFFALPRETKAQWPLARNAGWEHKAQIRPSTRTPDQKESYQVTRPRMEGLWPTEEELPGFRAATLAFERQCWE VGMRLLSCFAWKLGFDDAFFTRAHDPSVPAYQSTLRMLHYFAVDPALKDELGLWRAGAHTDFDCLTLLFQRPGQGGLQVL PGKEMEGRRWTPVEPAEGVITCNIGDMLTRWSDDVLPSNFHRVRNPVPHEYQGARYSLAFFCQANEDAVIAGPAGTHPPI TAGEYLKQRISANFSNRY
Sequences:
>Translated_338_residues MTSATIPGTAADHSGVQEELSREARMGGLGEETREREVRCIDISDFERRKEEIAEQLWSASVDIGFFQVSRHGIPIEDIR AAFARAEAFFALPRETKAQWPLARNAGWEHKAQIRPSTRTPDQKESYQVTRPRMEGLWPTEEELPGFRAATLAFERQCWE VGMRLLSCFAWKLGFDDAFFTRAHDPSVPAYQSTLRMLHYFAVDPALKDELGLWRAGAHTDFDCLTLLFQRPGQGGLQVL PGKEMEGRRWTPVEPAEGVITCNIGDMLTRWSDDVLPSNFHRVRNPVPHEYQGARYSLAFFCQANEDAVIAGPAGTHPPI TAGEYLKQRISANFSNRY >Mature_337_residues TSATIPGTAADHSGVQEELSREARMGGLGEETREREVRCIDISDFERRKEEIAEQLWSASVDIGFFQVSRHGIPIEDIRA AFARAEAFFALPRETKAQWPLARNAGWEHKAQIRPSTRTPDQKESYQVTRPRMEGLWPTEEELPGFRAATLAFERQCWEV GMRLLSCFAWKLGFDDAFFTRAHDPSVPAYQSTLRMLHYFAVDPALKDELGLWRAGAHTDFDCLTLLFQRPGQGGLQVLP GKEMEGRRWTPVEPAEGVITCNIGDMLTRWSDDVLPSNFHRVRNPVPHEYQGARYSLAFFCQANEDAVIAGPAGTHPPIT AGEYLKQRISANFSNRY
Specific function: Unknown
COG id: COG3491
COG function: function code R; Isopenicillin N synthase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI85816264, Length=283, Percent_Identity=28.9752650176678, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI28572124, Length=267, Percent_Identity=28.0898876404494, Blast_Score=89, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38245; Mature: 38114
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSATIPGTAADHSGVQEELSREARMGGLGEETREREVRCIDISDFERRKEEIAEQLWSA CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCEEEECCHHHHHHHHHHHHHHHHC SVDIGFFQVSRHGIPIEDIRAAFARAEAFFALPRETKAQWPLARNAGWEHKAQIRPSTRT CCCCEEEEECCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCHHCCCCCCEEEECCCCCC PDQKESYQVTRPRMEGLWPTEEELPGFRAATLAFERQCWEVGMRLLSCFAWKLGFDDAFF CCCCCCEEECCCHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH TRAHDPSVPAYQSTLRMLHYFAVDPALKDELGLWRAGAHTDFDCLTLLFQRPGQGGLQVL CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCEECCCCCCHHHHHHHHHCCCCCCCEEC PGKEMEGRRWTPVEPAEGVITCNIGDMLTRWSDDVLPSNFHRVRNPVPHEYQGARYSLAF CCCCCCCCCCCCCCCCCCEEEECHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCEEEEEE FCQANEDAVIAGPAGTHPPITAGEYLKQRISANFSNRY EEECCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure TSATIPGTAADHSGVQEELSREARMGGLGEETREREVRCIDISDFERRKEEIAEQLWSA CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCEEEECCHHHHHHHHHHHHHHHHC SVDIGFFQVSRHGIPIEDIRAAFARAEAFFALPRETKAQWPLARNAGWEHKAQIRPSTRT CCCCEEEEECCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCHHCCCCCCEEEECCCCCC PDQKESYQVTRPRMEGLWPTEEELPGFRAATLAFERQCWEVGMRLLSCFAWKLGFDDAFF CCCCCCEEECCCHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH TRAHDPSVPAYQSTLRMLHYFAVDPALKDELGLWRAGAHTDFDCLTLLFQRPGQGGLQVL CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCEECCCCCCHHHHHHHHHCCCCCCCEEC PGKEMEGRRWTPVEPAEGVITCNIGDMLTRWSDDVLPSNFHRVRNPVPHEYQGARYSLAF CCCCCCCCCCCCCCCCCCEEEECHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCEEEEEE FCQANEDAVIAGPAGTHPPITAGEYLKQRISANFSNRY EEECCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA