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The map label for this gene is tse [H]

Identifier: 120609773

GI number: 120609773

Start: 1184121

End: 1186010

Strand: Reverse

Name: tse [H]

Synonym: Aave_1081

Alternate gene names: 120609773

Gene position: 1186010-1184121 (Counterclockwise)

Preceding gene: 120609774

Following gene: 120609769

Centisome position: 22.16

GC content: 68.62

Gene sequence:

>1890_bases
GTGAACCCCGCCCATTCGATCACGCTGAAATTCGGTGCCGCCTCCGGCGCGGCCCTGGTCCTGACCTTCCTGCTGCTCAC
CACCGTGGGGGTCTGGAACGTGCGCCAGCAGGCGGTGGACGATTTCGCGCATTCCAGCCAGACGCGCGTCGCCCAGGCGG
ACGAGTCGCTCGACGGCACGTTCAGGGAGGTGGAGCAGAACCTGAACTACCTGGCGCAGACCGCGCAGATCCGGTCCGCC
GACGAAAGTCTCACCACCTACCTGGAGCGCGGCGGCATGATGACCCCCGACGCCAACGGCCCGGTGGAGCGGTCGATCTT
CGCGCTGCTCAAGGAGTTCGGCGATACCCATCCGAACATGCGCTACCTCGACGTGGGAACGCGCTGGGGCGGCTACGTGC
AGTGGCCCATCGAGCGCATCAACGACCACTACGACCCGCGCGTGCGGCCCTGGTACCAACTGGCGATGACGGCCCCCGAC
CGGGTGGTGCGGCCCGCGCCCTACCTCAGCGCCGCGGGGTCGGGCGGCGCCATCATTCCCTTCGCGCGGGCGATCAAGGG
CCCGAACGGAGACATCATCGGCGCGCTCGAGGGCGACCTCTCCCTGGAAGGGTTCGCGCATCTCACGAAAGGCATCGTCT
TCGGCGAGAGCGGCTACCTGCTCGTGGCGGACAACAACGGCAAGATCCTCATCGATCCCCGCGACAAGAAGAACGAATTC
AAGGACCTGAAAAGCCTGGGGGGCGGCTACGAACAGCTGGCACAGGCGGCCGACGGCATCGCGACCGTGGCGATGGACGG
CATGGCCTATCGCGCGACGGCCTACACCTCGCCCCGCAATGGCTGGAAATACTACGCGCTCATTCCGGAAGCGGAAATGA
TGGCCGCTGCCAACCGTCTGGCCTGGATCCTCGTCGGCAGCGGGATCGCCGTGCTCGTGCTGGCCCTGGCGGGCATGGTG
GCGCTCGTGCGCCGGATGACCGATCCGATCCGCAGCCTGACCCATTCGATGCAGGAAATCGCCTCCGGCGACGGCGACAT
GACGCGCCGCCTGCCGGTCGTGAGCCGCGACGAAGTCGGACAGCTCGCCGTGCAGTTCAACGCGTTCGTCGAGAAGCTGC
ACGGCGTGCTGCTCAACGTCATGAACAACAGCCGCCAGCTCGAGGTGGCGGCGCACGAGGTGTCGGCCGGCAACCATGAC
CTGTCGGCCCGGACCGAGCAGCAGGCCGCGTCGATCGAGCAGACCTCCGCGGCCATGAACGAGCTGTCGGAAACCGTGAG
CGCCACGGCCGACCAGGCCGCGCACGCGACCCAGGTGGCGTCCGGCGCCGTGGAAGTGGCCCGGCGCGGCAACGATGCCG
TATCGGGCGCCGCCAGGACCATGCACACGGCCGCCGAGCAGTCGGACCGCATCGTGGGCATCGTCGGCCTGATCGAAGGC
ATCGCCTTCCAGACCAACATCCTGGCGCTCAACGCGGCGGTGGAATCCGCGCGCGCGGGCGAGAGCGGGCGGGGGTTCGC
GGTGGTGGCCTCCGAGGTGCGCAGCCTCGCGCACCGCTCCACCGAGGCGGCGCGGGAAATCAAGGCCCTGCTGGAAGCGT
CGGTGGAGAACGTGCAGTCCGGTGCCCGGCAGATCGACCAGGCCGGCAAGACCATCGGCGAGCTGACGGAAGCCATCTCC
GGCGTCGCCACCATCACGAGCGAGATCGCGGCCTCGGCGCGCGAGCAGAGCCGGTCCATCGCGGAGGTCAACCAGGCCGT
CGCGGTGCTGGACCAGGCGACGCAGCAGAACGCCGCGCTGGTCGAGGAAATCTCCGCGGCGGCCCAGTCGCTCAATCACC
AGGGCAAGGACCTCAACGCCACGGTCGGCTTCTTCAAGCTCGGCGCCTGA

Upstream 100 bases:

>100_bases
GCGAATAACGCTGCACTATCGGTCATAGTTGCCGATAACGGATCAGGGCCCGGCCTGCAGCCGGGCAGCTCCCATCCGTA
TCCAACGTCCGAGGCTTTCC

Downstream 100 bases:

>100_bases
CGGCGCGCGCGGCACGGCAGGCCGGAAAGCAGGCAAGCGGCCGCTCAGAACGCCCCGGGATAGGCGCCGCCGTCGGCCAG
CACGTTCTGCCCGGTCAGGT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 629; Mature: 629

Protein sequence:

>629_residues
MNPAHSITLKFGAASGAALVLTFLLLTTVGVWNVRQQAVDDFAHSSQTRVAQADESLDGTFREVEQNLNYLAQTAQIRSA
DESLTTYLERGGMMTPDANGPVERSIFALLKEFGDTHPNMRYLDVGTRWGGYVQWPIERINDHYDPRVRPWYQLAMTAPD
RVVRPAPYLSAAGSGGAIIPFARAIKGPNGDIIGALEGDLSLEGFAHLTKGIVFGESGYLLVADNNGKILIDPRDKKNEF
KDLKSLGGGYEQLAQAADGIATVAMDGMAYRATAYTSPRNGWKYYALIPEAEMMAAANRLAWILVGSGIAVLVLALAGMV
ALVRRMTDPIRSLTHSMQEIASGDGDMTRRLPVVSRDEVGQLAVQFNAFVEKLHGVLLNVMNNSRQLEVAAHEVSAGNHD
LSARTEQQAASIEQTSAAMNELSETVSATADQAAHATQVASGAVEVARRGNDAVSGAARTMHTAAEQSDRIVGIVGLIEG
IAFQTNILALNAAVESARAGESGRGFAVVASEVRSLAHRSTEAAREIKALLEASVENVQSGARQIDQAGKTIGELTEAIS
GVATITSEIAASAREQSRSIAEVNQAVAVLDQATQQNAALVEEISAAAQSLNHQGKDLNATVGFFKLGA

Sequences:

>Translated_629_residues
MNPAHSITLKFGAASGAALVLTFLLLTTVGVWNVRQQAVDDFAHSSQTRVAQADESLDGTFREVEQNLNYLAQTAQIRSA
DESLTTYLERGGMMTPDANGPVERSIFALLKEFGDTHPNMRYLDVGTRWGGYVQWPIERINDHYDPRVRPWYQLAMTAPD
RVVRPAPYLSAAGSGGAIIPFARAIKGPNGDIIGALEGDLSLEGFAHLTKGIVFGESGYLLVADNNGKILIDPRDKKNEF
KDLKSLGGGYEQLAQAADGIATVAMDGMAYRATAYTSPRNGWKYYALIPEAEMMAAANRLAWILVGSGIAVLVLALAGMV
ALVRRMTDPIRSLTHSMQEIASGDGDMTRRLPVVSRDEVGQLAVQFNAFVEKLHGVLLNVMNNSRQLEVAAHEVSAGNHD
LSARTEQQAASIEQTSAAMNELSETVSATADQAAHATQVASGAVEVARRGNDAVSGAARTMHTAAEQSDRIVGIVGLIEG
IAFQTNILALNAAVESARAGESGRGFAVVASEVRSLAHRSTEAAREIKALLEASVENVQSGARQIDQAGKTIGELTEAIS
GVATITSEIAASAREQSRSIAEVNQAVAVLDQATQQNAALVEEISAAAQSLNHQGKDLNATVGFFKLGA
>Mature_629_residues
MNPAHSITLKFGAASGAALVLTFLLLTTVGVWNVRQQAVDDFAHSSQTRVAQADESLDGTFREVEQNLNYLAQTAQIRSA
DESLTTYLERGGMMTPDANGPVERSIFALLKEFGDTHPNMRYLDVGTRWGGYVQWPIERINDHYDPRVRPWYQLAMTAPD
RVVRPAPYLSAAGSGGAIIPFARAIKGPNGDIIGALEGDLSLEGFAHLTKGIVFGESGYLLVADNNGKILIDPRDKKNEF
KDLKSLGGGYEQLAQAADGIATVAMDGMAYRATAYTSPRNGWKYYALIPEAEMMAAANRLAWILVGSGIAVLVLALAGMV
ALVRRMTDPIRSLTHSMQEIASGDGDMTRRLPVVSRDEVGQLAVQFNAFVEKLHGVLLNVMNNSRQLEVAAHEVSAGNHD
LSARTEQQAASIEQTSAAMNELSETVSATADQAAHATQVASGAVEVARRGNDAVSGAARTMHTAAEQSDRIVGIVGLIEG
IAFQTNILALNAAVESARAGESGRGFAVVASEVRSLAHRSTEAAREIKALLEASVENVQSGARQIDQAGKTIGELTEAIS
GVATITSEIAASAREQSRSIAEVNQAVAVLDQATQQNAALVEEISAAAQSLNHQGKDLNATVGFFKLGA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=338, Percent_Identity=43.7869822485207, Blast_Score=243, Evalue=4e-65,
Organism=Escherichia coli, GI2367378, Length=296, Percent_Identity=45.6081081081081, Blast_Score=231, Evalue=1e-61,
Organism=Escherichia coli, GI1788194, Length=322, Percent_Identity=42.5465838509317, Blast_Score=229, Evalue=4e-61,
Organism=Escherichia coli, GI1788195, Length=308, Percent_Identity=45.4545454545455, Blast_Score=228, Evalue=7e-61,
Organism=Escherichia coli, GI1789453, Length=336, Percent_Identity=33.0357142857143, Blast_Score=168, Evalue=8e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 66905; Mature: 66905

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPAHSITLKFGAASGAALVLTFLLLTTVGVWNVRQQAVDDFAHSSQTRVAQADESLDGT
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHH
FREVEQNLNYLAQTAQIRSADESLTTYLERGGMMTPDANGPVERSIFALLKEFGDTHPNM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
RYLDVGTRWGGYVQWPIERINDHYDPRVRPWYQLAMTAPDRVVRPAPYLSAAGSGGAIIP
EEEECCCCCCCEEECCHHHCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCHH
FARAIKGPNGDIIGALEGDLSLEGFAHLTKGIVFGESGYLLVADNNGKILIDPRDKKNEF
HHHHHCCCCCCEEEEECCCCCHHHHHHHHHCEEECCCCEEEEECCCCEEEECCCCCHHHH
KDLKSLGGGYEQLAQAADGIATVAMDGMAYRATAYTSPRNGWKYYALIPEAEMMAAANRL
HHHHHHCCCHHHHHHHHCCHHHHHHCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHE
AWILVGSGIAVLVLALAGMVALVRRMTDPIRSLTHSMQEIASGDGDMTRRLPVVSRDEVG
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHH
QLAVQFNAFVEKLHGVLLNVMNNSRQLEVAAHEVSAGNHDLSARTEQQAASIEQTSAAMN
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
ELSETVSATADQAAHATQVASGAVEVARRGNDAVSGAARTMHTAAEQSDRIVGIVGLIEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHH
IAFQTNILALNAAVESARAGESGRGFAVVASEVRSLAHRSTEAAREIKALLEASVENVQS
HHHHHHHEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GARQIDQAGKTIGELTEAISGVATITSEIAASAREQSRSIAEVNQAVAVLDQATQQNAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEEISAAAQSLNHQGKDLNATVGFFKLGA
HHHHHHHHHHHCCCCCCCCCEECEEEECC
>Mature Secondary Structure
MNPAHSITLKFGAASGAALVLTFLLLTTVGVWNVRQQAVDDFAHSSQTRVAQADESLDGT
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHH
FREVEQNLNYLAQTAQIRSADESLTTYLERGGMMTPDANGPVERSIFALLKEFGDTHPNM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
RYLDVGTRWGGYVQWPIERINDHYDPRVRPWYQLAMTAPDRVVRPAPYLSAAGSGGAIIP
EEEECCCCCCCEEECCHHHCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCHH
FARAIKGPNGDIIGALEGDLSLEGFAHLTKGIVFGESGYLLVADNNGKILIDPRDKKNEF
HHHHHCCCCCCEEEEECCCCCHHHHHHHHHCEEECCCCEEEEECCCCEEEECCCCCHHHH
KDLKSLGGGYEQLAQAADGIATVAMDGMAYRATAYTSPRNGWKYYALIPEAEMMAAANRL
HHHHHHCCCHHHHHHHHCCHHHHHHCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHE
AWILVGSGIAVLVLALAGMVALVRRMTDPIRSLTHSMQEIASGDGDMTRRLPVVSRDEVG
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHH
QLAVQFNAFVEKLHGVLLNVMNNSRQLEVAAHEVSAGNHDLSARTEQQAASIEQTSAAMN
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
ELSETVSATADQAAHATQVASGAVEVARRGNDAVSGAARTMHTAAEQSDRIVGIVGLIEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHH
IAFQTNILALNAAVESARAGESGRGFAVVASEVRSLAHRSTEAAREIKALLEASVENVQS
HHHHHHHEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GARQIDQAGKTIGELTEAISGVATITSEIAASAREQSRSIAEVNQAVAVLDQATQQNAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEEISAAAQSLNHQGKDLNATVGFFKLGA
HHHHHHHHHHHCCCCCCCCCEECEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]