Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is trxB [H]
Identifier: 120609770
GI number: 120609770
Start: 1180845
End: 1181849
Strand: Direct
Name: trxB [H]
Synonym: Aave_1078
Alternate gene names: 120609770
Gene position: 1180845-1181849 (Clockwise)
Preceding gene: 120609768
Following gene: 120609771
Centisome position: 22.06
GC content: 71.94
Gene sequence:
>1005_bases ATGGCAGCAGACATGGCGGCAGGCGACGGAACAGGCCCCGAGGGCGGGACAAGCGACTTCGACAGCGATGTGCTCGTCAT CGGCGGTGGCCCGGCCGGGCTGACGGCGGCGCTCTACCTCGCGCGCTTCCGGCGCTCGGTGGTGCTGGTGGATGCCGGCG ACAGCCGCGTCGCGAAGATTCCGCGCTCGCACAACTATCCCGGTTTCGTGGATGGAATTCCGGGCCATTCGCTGCTGGAG ACACTGCGCGCGCAGATGCGGCGCTATCCGATCCGCACCGTGCGCGCCGCGATCGAACGCATCGAGCGCGTGGCGCCGGC CGAAGGCGCATCCGGCCCAGCGGAAGGGCAAGGACAAGGGCAAGGGTTCTTCCATGCGCACTGGCGCGGCGGAGGCAGCG TGCGCGCGCCGTTCGTGCTGCTGGCCACGGGTGTGGAAGATATCCCGCCGCCGATGCCGCACGTGCGGCAGGCCCTGGAG GACGGACTGCTGCGCTACTGCCCCGTGTGCGATGCCTACGAAGCGATCGGCCAGGGGATCGGCGTCATCGCCGAGGGGGC GCACGGGGTCGGCGAGGCGATCTACCTGCGGCATTTCAGCGCCGACGTCACGCTGTTCCTCGCGCCCGGCGATACGGTGC TGTCGGGTGATGACCGAGAGCGGCTGGTGCGCGCCGGCATCCGCTGGGTGCAGGCACCCGTGGACGCGATCCGCCGCGAG GGGGACCGCGTGGTGGTGCACCATGCGGGGGGCAGTTCGGCGTGCGACACGCTCTACTGCGCGCTGGGCCTGCAGATCCA TGCGGGCCTGGCCGCCGGGCTGGGCGCCGCGCTGGACGCATCGGGCTACGTGGTGGTGGATGCCCACGGCGCGACCACGG TGCCGGGTCTCTATGCGGCGGGCGACGTGGCGCAGGGGCTGAACCAGATCGCCGTGGCGGCGGGCGGCGCGGCCATCGCG TCCTCGGCCATTCACGTGGCGCTGGGGCCGTCGTCCGGCACCTAG
Upstream 100 bases:
>100_bases CCCGGGTACGGCAATTGCCGAAGTCTCCGGAATGGGCGCGGATGGTGCGCCCGTCCAGTTCCGCGGGTTGCGGATGCGGT GCGGAATCCACGGAGCGAAG
Downstream 100 bases:
>100_bases CGAGGCCGCGGCCGGCATCGCGGTTCACGGTGCCCGCATTCCGCACTGCAGGGGGCCTGCCGGCGCCGTGCGTGCGACAC TGGCCGGCTCCCCCACGATC
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: TR; TRXR [H]
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MAADMAAGDGTGPEGGTSDFDSDVLVIGGGPAGLTAALYLARFRRSVVLVDAGDSRVAKIPRSHNYPGFVDGIPGHSLLE TLRAQMRRYPIRTVRAAIERIERVAPAEGASGPAEGQGQGQGFFHAHWRGGGSVRAPFVLLATGVEDIPPPMPHVRQALE DGLLRYCPVCDAYEAIGQGIGVIAEGAHGVGEAIYLRHFSADVTLFLAPGDTVLSGDDRERLVRAGIRWVQAPVDAIRRE GDRVVVHHAGGSSACDTLYCALGLQIHAGLAAGLGAALDASGYVVVDAHGATTVPGLYAAGDVAQGLNQIAVAAGGAAIA SSAIHVALGPSSGT
Sequences:
>Translated_334_residues MAADMAAGDGTGPEGGTSDFDSDVLVIGGGPAGLTAALYLARFRRSVVLVDAGDSRVAKIPRSHNYPGFVDGIPGHSLLE TLRAQMRRYPIRTVRAAIERIERVAPAEGASGPAEGQGQGQGFFHAHWRGGGSVRAPFVLLATGVEDIPPPMPHVRQALE DGLLRYCPVCDAYEAIGQGIGVIAEGAHGVGEAIYLRHFSADVTLFLAPGDTVLSGDDRERLVRAGIRWVQAPVDAIRRE GDRVVVHHAGGSSACDTLYCALGLQIHAGLAAGLGAALDASGYVVVDAHGATTVPGLYAAGDVAQGLNQIAVAAGGAAIA SSAIHVALGPSSGT >Mature_333_residues AADMAAGDGTGPEGGTSDFDSDVLVIGGGPAGLTAALYLARFRRSVVLVDAGDSRVAKIPRSHNYPGFVDGIPGHSLLET LRAQMRRYPIRTVRAAIERIERVAPAEGASGPAEGQGQGQGFFHAHWRGGGSVRAPFVLLATGVEDIPPPMPHVRQALED GLLRYCPVCDAYEAIGQGIGVIAEGAHGVGEAIYLRHFSADVTLFLAPGDTVLSGDDRERLVRAGIRWVQAPVDAIRREG DRVVVHHAGGSSACDTLYCALGLQIHAGLAAGLGAALDASGYVVVDAHGATTVPGLYAAGDVAQGLNQIAVAAGGAAIAS SAIHVALGPSSGT
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 34158; Mature: 34027
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADMAAGDGTGPEGGTSDFDSDVLVIGGGPAGLTAALYLARFRRSVVLVDAGDSRVAKI CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHEEC PRSHNYPGFVDGIPGHSLLETLRAQMRRYPIRTVRAAIERIERVAPAEGASGPAEGQGQG CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC QGFFHAHWRGGGSVRAPFVLLATGVEDIPPPMPHVRQALEDGLLRYCPVCDAYEAIGQGI CCEEEEEECCCCCCCCCEEEEECCCHHCCCCCHHHHHHHHHCHHHHCCCHHHHHHHHCCC GVIAEGAHGVGEAIYLRHFSADVTLFLAPGDTVLSGDDRERLVRAGIRWVQAPVDAIRRE CEEECCCCCCCCEEEEEEECCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCC GDRVVVHHAGGSSACDTLYCALGLQIHAGLAAGLGAALDASGYVVVDAHGATTVPGLYAA CCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHCCHHCCCCCEEEEECCCCCCCCCHHHH GDVAQGLNQIAVAAGGAAIASSAIHVALGPSSGT HHHHHHHHHHHHHCCCHHHHCCEEEEEECCCCCC >Mature Secondary Structure AADMAAGDGTGPEGGTSDFDSDVLVIGGGPAGLTAALYLARFRRSVVLVDAGDSRVAKI CCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCHHEEC PRSHNYPGFVDGIPGHSLLETLRAQMRRYPIRTVRAAIERIERVAPAEGASGPAEGQGQG CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC QGFFHAHWRGGGSVRAPFVLLATGVEDIPPPMPHVRQALEDGLLRYCPVCDAYEAIGQGI CCEEEEEECCCCCCCCCEEEEECCCHHCCCCCHHHHHHHHHCHHHHCCCHHHHHHHHCCC GVIAEGAHGVGEAIYLRHFSADVTLFLAPGDTVLSGDDRERLVRAGIRWVQAPVDAIRRE CEEECCCCCCCCEEEEEEECCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCC GDRVVVHHAGGSSACDTLYCALGLQIHAGLAAGLGAALDASGYVVVDAHGATTVPGLYAA CCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHCCHHCCCCCEEEEECCCCCCCCCHHHH GDVAQGLNQIAVAAGGAAIASSAIHVALGPSSGT HHHHHHHHHHHHHCCCHHHHCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]