Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609768
Identifier: 120609768
GI number: 120609768
Start: 1179770
End: 1180171
Strand: Direct
Name: 120609768
Synonym: Aave_1076
Alternate gene names: NA
Gene position: 1179770-1180171 (Clockwise)
Preceding gene: 120609763
Following gene: 120609770
Centisome position: 22.04
GC content: 73.38
Gene sequence:
>402_bases TTGACTGCCCTGTGCCGCCCATGCCTGTACGGCTTTCCCCGCCCATCGCGTCCCACGCTGCCAGCCTCGCGCAAAGCCGC GGGCCGCGCGGCGCGGCGCATGCCCCACTGCGGCTTTCCCCGCCTTCGCGCCCGCGCGCCCGTCCCGTGCCTCCGATACC GCTGCCGCTCCTCCCCCGCAAAAACGCTACAGGCCTCGTCCTCGCCCTCGTGGGCGCCATTGCATTCAGCGGCTGGGCAT CGCGGGGCTGGGCGTGACGGACTACTACCTCGCGACATGCGCCCGCTGCGGCTGGCCGGTGCGCTGCGCGTGGCCGAAGG CGTGACCACCCTGGAGAAGGTCATCGCCGCAACGCCGCCGCTGGAGTCACGTGACCGGGCGGGCTCGCCGTCCGCGTCCT GA
Upstream 100 bases:
>100_bases GGATTATGCGAAGCGATCCATAGCTAAATCCTCCGCGGCAGGGCGCAAATAGGTCGCGAGACGTAACAGTTCCATCCACC GAAACGCATGCCGTCACCGC
Downstream 100 bases:
>100_bases ATCCCTCCGGCCTCATGTTCATGGGGTCGGGGTCGCTTTCGCGATCGGTGCCACCAACTACAGCGTCGGGACCGGCGCGC GCATGGGTCCGGGCTATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MTALCRPCLYGFPRPSRPTLPASRKAAGRAARRMPHCGFPRLRARAPVPCLRYRCRSSPAKTLQASSSPSWAPLHSAAGH RGAGRDGLLPRDMRPLRLAGALRVAEGVTTLEKVIAATPPLESRDRAGSPSAS
Sequences:
>Translated_133_residues MTALCRPCLYGFPRPSRPTLPASRKAAGRAARRMPHCGFPRLRARAPVPCLRYRCRSSPAKTLQASSSPSWAPLHSAAGH RGAGRDGLLPRDMRPLRLAGALRVAEGVTTLEKVIAATPPLESRDRAGSPSAS >Mature_132_residues TALCRPCLYGFPRPSRPTLPASRKAAGRAARRMPHCGFPRLRARAPVPCLRYRCRSSPAKTLQASSSPSWAPLHSAAGHR GAGRDGLLPRDMRPLRLAGALRVAEGVTTLEKVIAATPPLESRDRAGSPSAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14218; Mature: 14086
Theoretical pI: Translated: 12.21; Mature: 12.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALCRPCLYGFPRPSRPTLPASRKAAGRAARRMPHCGFPRLRARAPVPCLRYRCRSSPA CCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHH KTLQASSSPSWAPLHSAAGHRGAGRDGLLPRDMRPLRLAGALRVAEGVTTLEKVIAATPP HHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC LESRDRAGSPSAS CCCCCCCCCCCCC >Mature Secondary Structure TALCRPCLYGFPRPSRPTLPASRKAAGRAARRMPHCGFPRLRARAPVPCLRYRCRSSPA CCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHH KTLQASSSPSWAPLHSAAGHRGAGRDGLLPRDMRPLRLAGALRVAEGVTTLEKVIAATPP HHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC LESRDRAGSPSAS CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA