Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609764
Identifier: 120609764
GI number: 120609764
Start: 1175009
End: 1175401
Strand: Reverse
Name: 120609764
Synonym: Aave_1071
Alternate gene names: NA
Gene position: 1175401-1175009 (Counterclockwise)
Preceding gene: 120609765
Following gene: 120609757
Centisome position: 21.96
GC content: 61.07
Gene sequence:
>393_bases ATGACCACCACCCGTCGATTCAAGGTAGCTGCCCTGCTCCTCGGCATTGCAGTGGTTGGGATCACCCTCCGCAGTCTCGC CACCCCTGAATACCAAAGAAGCCACTACAGCCCGCGGCACGTCTATCGGCTCGATTACTACGAAGCCTCCTGGCTCCAGC GGATGGCGCATTGGGACATGCGCTATCCGCACGTCATCCGTCTGTACCGGATCGAACCACCGGCTCTCCTCGGAGAAAGC GCCGTCGTGGACCTGTGGATCAACGGCCAGTTGTACTGGTACCTGAATCCCCCCATGAACAAGGTCCGCATCGGAAGAGA CGTGGTCTTCGAGAACATCCCTCCCGAATGCACCGGCTGCCCGCCCCTGCCCGATTCCGCGGTCATGCCCTGA
Upstream 100 bases:
>100_bases TGTCCCGGAGAGGTCTTGCCCATCGCATTCACCCTCCAAGGCAACGCATGCCGTGGAGATGAAACGGGCCTCAACCTCTG GAACCAGCACGTCCGCTCCC
Downstream 100 bases:
>100_bases CTCGCCCGCCCAAGAAAAACGGCACCCGAAGGTGCCGTCTTTCCCAATCGTGGAAGGGGATGTGCCCTGGGCGGGTCAGT CCTCGACGAAGGCTTCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTTTRRFKVAALLLGIAVVGITLRSLATPEYQRSHYSPRHVYRLDYYEASWLQRMAHWDMRYPHVIRLYRIEPPALLGES AVVDLWINGQLYWYLNPPMNKVRIGRDVVFENIPPECTGCPPLPDSAVMP
Sequences:
>Translated_130_residues MTTTRRFKVAALLLGIAVVGITLRSLATPEYQRSHYSPRHVYRLDYYEASWLQRMAHWDMRYPHVIRLYRIEPPALLGES AVVDLWINGQLYWYLNPPMNKVRIGRDVVFENIPPECTGCPPLPDSAVMP >Mature_129_residues TTTRRFKVAALLLGIAVVGITLRSLATPEYQRSHYSPRHVYRLDYYEASWLQRMAHWDMRYPHVIRLYRIEPPALLGESA VVDLWINGQLYWYLNPPMNKVRIGRDVVFENIPPECTGCPPLPDSAVMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15099; Mature: 14968
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTRRFKVAALLLGIAVVGITLRSLATPEYQRSHYSPRHVYRLDYYEASWLQRMAHWDM CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHCCC RYPHVIRLYRIEPPALLGESAVVDLWINGQLYWYLNPPMNKVRIGRDVVFENIPPECTGC CCCCEEEEEEECCCCCCCCCEEEEEEECCEEEEEECCCCCCEECCCHHEECCCCCCCCCC PPLPDSAVMP CCCCCCCCCC >Mature Secondary Structure TTTRRFKVAALLLGIAVVGITLRSLATPEYQRSHYSPRHVYRLDYYEASWLQRMAHWDM CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHCCC RYPHVIRLYRIEPPALLGESAVVDLWINGQLYWYLNPPMNKVRIGRDVVFENIPPECTGC CCCCEEEEEEECCCCCCCCCEEEEEEECCEEEEEECCCCCCEECCCHHEECCCCCCCCCC PPLPDSAVMP CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA