Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609762
Identifier: 120609762
GI number: 120609762
Start: 1172915
End: 1173403
Strand: Direct
Name: 120609762
Synonym: Aave_1069
Alternate gene names: NA
Gene position: 1172915-1173403 (Clockwise)
Preceding gene: 120609761
Following gene: 120609763
Centisome position: 21.91
GC content: 61.96
Gene sequence:
>489_bases GTGAAAATAAAGAGCCAGAAAGACTTTTTCTCCGGCCTCATGTTCATGGGGGTCGGGGTCGCTTTCGCGGTCGGTGCCAC CAACTACAGCGTCGGGACCGGCGCGCGCATGGGTCCGGGCTATTTCCCCCTGATCCTGGGAATCCTGCTCGCGATCCTGG GCGCGGCCATCACGTTCTACGCCACCGTGGTGGAGAGTGCCGATGGGGACAGGATCGGCAAGTGGGCCTGGAAGCCGCTG TTCTTCATCCTCGCTTCCAACTTCGCGTTCGGCGTGCTGCTCGCCGGCCTGCCGACCTTCGGCGTGCCGGCCATGGGCCT GATCGTCGCCATCTACGCGCTCGTGTTCATCGCGAGCCTGGCGGGCGAAAAATTCAACGCCAAGGAAACTTTCATTCTCG CCACCATCCTGGCGGTGGGCAGCTACGTGGCTTTCGTGTGGGCGCTGAAACTGCAGTTCCCCGTGTGGCCCAGTTTCATT TCGGGTTGA
Upstream 100 bases:
>100_bases TTGCGGTTTTCCCTAGGTGCAGGGTAGGTGGTATCCACATCGATCGGGCAGGGGACGTGATTGCACAATCGCCCGTCAAC TTCGTGTAAGGAGTCGTTTC
Downstream 100 bases:
>100_bases GCGGGAGCATCGATAACCATGGAATTGTTCGACAACCTGGCGACCGGCTTCGGCGTCGCCTTCACCTTCCAGAACCTCAT CTACTGCCTGATCGGCTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ1 [H]
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKIKSQKDFFSGLMFMGVGVAFAVGATNYSVGTGARMGPGYFPLILGILLAILGAAITFYATVVESADGDRIGKWAWKPL FFILASNFAFGVLLAGLPTFGVPAMGLIVAIYALVFIASLAGEKFNAKETFILATILAVGSYVAFVWALKLQFPVWPSFI SG
Sequences:
>Translated_162_residues MKIKSQKDFFSGLMFMGVGVAFAVGATNYSVGTGARMGPGYFPLILGILLAILGAAITFYATVVESADGDRIGKWAWKPL FFILASNFAFGVLLAGLPTFGVPAMGLIVAIYALVFIASLAGEKFNAKETFILATILAVGSYVAFVWALKLQFPVWPSFI SG >Mature_162_residues MKIKSQKDFFSGLMFMGVGVAFAVGATNYSVGTGARMGPGYFPLILGILLAILGAAITFYATVVESADGDRIGKWAWKPL FFILASNFAFGVLLAGLPTFGVPAMGLIVAIYALVFIASLAGEKFNAKETFILATILAVGSYVAFVWALKLQFPVWPSFI SG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009936 [H]
Pfam domain/function: PF07331 DUF1468 [H]
EC number: NA
Molecular weight: Translated: 17192; Mature: 17192
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKSQKDFFSGLMFMGVGVAFAVGATNYSVGTGARMGPGYFPLILGILLAILGAAITFY CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ATVVESADGDRIGKWAWKPLFFILASNFAFGVLLAGLPTFGVPAMGLIVAIYALVFIASL HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH AGEKFNAKETFILATILAVGSYVAFVWALKLQFPVWPSFISG HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC >Mature Secondary Structure MKIKSQKDFFSGLMFMGVGVAFAVGATNYSVGTGARMGPGYFPLILGILLAILGAAITFY CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ATVVESADGDRIGKWAWKPLFFILASNFAFGVLLAGLPTFGVPAMGLIVAIYALVFIASL HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH AGEKFNAKETFILATILAVGSYVAFVWALKLQFPVWPSFISG HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]