Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609753
Identifier: 120609753
GI number: 120609753
Start: 1162596
End: 1164413
Strand: Direct
Name: 120609753
Synonym: Aave_1060
Alternate gene names: NA
Gene position: 1162596-1164413 (Clockwise)
Preceding gene: 120609752
Following gene: 120609758
Centisome position: 21.72
GC content: 67.6
Gene sequence:
>1818_bases ATGATGCATTCCAGCGCCTGCGCCCGTTCCGGCAGGCAGCCACCTTCTTCCCCGGCCCAGCCCGCCGCCGTGCACGAAAC ATCGACAACCGATCGGCCCCTGTCCCTTGCGGGACGGCCGGGAGCGCCCGGCTTTTCATCGGCCGAGGCCCTGGCGGGCG GTATCAGGGCGAGGGCCCGCTCCACGCCTGCTCCGGCGGAGCAGGCCATCCGCCCGAGAAGCCATGCGATGGCATCGACC AGGGGGCATGCCGCGGGCTTGCCTCCGGAGCCTGCGGCCGATCCATCGACAGTGAAAACCAGGGGCGGACCCGATAGCGC GCTGAACGGGTTCCTGTCAGGCATGAAGGAGGGCGATAAGGCGCTGTTCGTGGTGGGCGGGGGCACTGCTGCCCTGACCT ATCTGTCCACGGTGGATCTCGACAGTCGCTTCACCCATGTGGTGGTGGTCGGCGACCAGGGTTACTGGAACCGGGTCGGG CACAGGCTCGCCCAGCCGCACCACATCCTGGCGTTGCCGCACGAGGATAGCGCGGGGTTCGTCGATCCCGGCCGGCATGA CGCCCTGCGCCGCATACTTCCCCACGACGACCGGTCGGCTTATGTGCACTCCCGCGACTACCAGGCCCGGCTGGCGCGAC TCGGGCAATACACGCGCGGGCTGCTGGAGAGCCAGGGCCGGAAGGTGCTTTTCGCTGGCGGGGTTTCCGTCGGGAAGATC ACGAAGAGCGACGGGGCGGGCTACCGCATCGCGACGAATGCAGCCGGGCCGGCCGTAGTGGGCCACAAGGTGGTGATCGC GACCGGAGCCGCGCCTGCGCGAAGCCTGGCGAATCACCTGCTGCCGGACAAGTCCACGAGGGATCTTCCCCACATCCTCG GCTATGACGACATCCTGGCTCCGGGCGCGGCCGAGCGCATCCAGGGCAAGAGCGTCATGGTCTATGGCGGAGGTCCGACG GCCGCATGGGCCATGGAGGTCGCGAAAGGCCATGCGGGGTCGTCCATGTGGGTGGCGAGAAACGGCTTCGGGGTGGCGGA AGCGGCCGGCCCGCGGGTGGGGGCGATCATCGAAGGCAGCCGCGATTGCCAGATCCGGGGCGAGATCGAAGCCATCCGGC CCCTGGGTTCCGGCGAAGCCGGCGGGGAGCCAAGGCTTCGTGTGGTCGTGGCGAGCGAGACATCCGGGAAGGCCGTGGAA AGGAAATCGGTGGATGTCGATTACCTTGTGAATTCCATCGGGCAGGATGCCTATGCCCCGGGCGGGCTCCATGACGTGTT GTCCGCTGACATCAAGGCTGAACTGCAGCCGATTCCCGATCGCAACCGGGTTTCCGGCGTGCCGGGCACGATGCTGGGCT TCGGAACGGAAACGGGCGATCTGCAGATCATCGGCGCCGCTGCGGCGTCTTACCAGGACGCCAGCCGCGGACTGAAACCG GGCCGCCTGGCCAGCGAGACGCTGCCCAGGAGCGGGAAGATCGGCATCACGATCGGTGGGGTGGTGGCATCGGTGGCGGC GCTCACCGATTACATGCCGATGCGGCAGAACCCGGCGACGGGCGAGATGAAGGTGACCGGGCTGAATCTGCATGTGATGA ATGCGACCCAGCTGGCGGTCTATCTCACGGGCGCCTATCCGGATGCTCCGGCGGAAAGGATCAACACCACGGTGGAGCAG TACCTGGCGGCGCGCTCCTGCACGGAATTCGGATTGCCGGACGTGGAACTGCAGGCTTTCATGGAGGCGCGCCTCGGCCC CCTGCCACGCATCGAAGGCATTGCTGCGGAGCCCGGAGCCCGATCTTCCGCGGCATGA
Upstream 100 bases:
>100_bases TGGTGCGGGAGTTCGGACCGCTGCGCCGGCATTCGCGCGCGAACTGCCGGAACGCGCTGCCGTGGGCACCATCGGGGAAA AGAATTTCCGATCCCGAACC
Downstream 100 bases:
>100_bases CGGGCCCCTACAGCACCCGCCCGAACCACCACAGCGACAGCAGGCCGGCCAGCACCAGCAGGGCCGCTCCCGCGAGCGCG AGCAGGGCGGAGATTTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MMHSSACARSGRQPPSSPAQPAAVHETSTTDRPLSLAGRPGAPGFSSAEALAGGIRARARSTPAPAEQAIRPRSHAMAST RGHAAGLPPEPAADPSTVKTRGGPDSALNGFLSGMKEGDKALFVVGGGTAALTYLSTVDLDSRFTHVVVVGDQGYWNRVG HRLAQPHHILALPHEDSAGFVDPGRHDALRRILPHDDRSAYVHSRDYQARLARLGQYTRGLLESQGRKVLFAGGVSVGKI TKSDGAGYRIATNAAGPAVVGHKVVIATGAAPARSLANHLLPDKSTRDLPHILGYDDILAPGAAERIQGKSVMVYGGGPT AAWAMEVAKGHAGSSMWVARNGFGVAEAAGPRVGAIIEGSRDCQIRGEIEAIRPLGSGEAGGEPRLRVVVASETSGKAVE RKSVDVDYLVNSIGQDAYAPGGLHDVLSADIKAELQPIPDRNRVSGVPGTMLGFGTETGDLQIIGAAAASYQDASRGLKP GRLASETLPRSGKIGITIGGVVASVAALTDYMPMRQNPATGEMKVTGLNLHVMNATQLAVYLTGAYPDAPAERINTTVEQ YLAARSCTEFGLPDVELQAFMEARLGPLPRIEGIAAEPGARSSAA
Sequences:
>Translated_605_residues MMHSSACARSGRQPPSSPAQPAAVHETSTTDRPLSLAGRPGAPGFSSAEALAGGIRARARSTPAPAEQAIRPRSHAMAST RGHAAGLPPEPAADPSTVKTRGGPDSALNGFLSGMKEGDKALFVVGGGTAALTYLSTVDLDSRFTHVVVVGDQGYWNRVG HRLAQPHHILALPHEDSAGFVDPGRHDALRRILPHDDRSAYVHSRDYQARLARLGQYTRGLLESQGRKVLFAGGVSVGKI TKSDGAGYRIATNAAGPAVVGHKVVIATGAAPARSLANHLLPDKSTRDLPHILGYDDILAPGAAERIQGKSVMVYGGGPT AAWAMEVAKGHAGSSMWVARNGFGVAEAAGPRVGAIIEGSRDCQIRGEIEAIRPLGSGEAGGEPRLRVVVASETSGKAVE RKSVDVDYLVNSIGQDAYAPGGLHDVLSADIKAELQPIPDRNRVSGVPGTMLGFGTETGDLQIIGAAAASYQDASRGLKP GRLASETLPRSGKIGITIGGVVASVAALTDYMPMRQNPATGEMKVTGLNLHVMNATQLAVYLTGAYPDAPAERINTTVEQ YLAARSCTEFGLPDVELQAFMEARLGPLPRIEGIAAEPGARSSAA >Mature_605_residues MMHSSACARSGRQPPSSPAQPAAVHETSTTDRPLSLAGRPGAPGFSSAEALAGGIRARARSTPAPAEQAIRPRSHAMAST RGHAAGLPPEPAADPSTVKTRGGPDSALNGFLSGMKEGDKALFVVGGGTAALTYLSTVDLDSRFTHVVVVGDQGYWNRVG HRLAQPHHILALPHEDSAGFVDPGRHDALRRILPHDDRSAYVHSRDYQARLARLGQYTRGLLESQGRKVLFAGGVSVGKI TKSDGAGYRIATNAAGPAVVGHKVVIATGAAPARSLANHLLPDKSTRDLPHILGYDDILAPGAAERIQGKSVMVYGGGPT AAWAMEVAKGHAGSSMWVARNGFGVAEAAGPRVGAIIEGSRDCQIRGEIEAIRPLGSGEAGGEPRLRVVVASETSGKAVE RKSVDVDYLVNSIGQDAYAPGGLHDVLSADIKAELQPIPDRNRVSGVPGTMLGFGTETGDLQIIGAAAASYQDASRGLKP GRLASETLPRSGKIGITIGGVVASVAALTDYMPMRQNPATGEMKVTGLNLHVMNATQLAVYLTGAYPDAPAERINTTVEQ YLAARSCTEFGLPDVELQAFMEARLGPLPRIEGIAAEPGARSSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62833; Mature: 62833
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMHSSACARSGRQPPSSPAQPAAVHETSTTDRPLSLAGRPGAPGFSSAEALAGGIRARAR CCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCC STPAPAEQAIRPRSHAMASTRGHAAGLPPEPAADPSTVKTRGGPDSALNGFLSGMKEGDK CCCCCHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCC ALFVVGGGTAALTYLSTVDLDSRFTHVVVVGDQGYWNRVGHRLAQPHHILALPHEDSAGF EEEEEECCCEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCC VDPGRHDALRRILPHDDRSAYVHSRDYQARLARLGQYTRGLLESQGRKVLFAGGVSVGKI CCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECEE TKSDGAGYRIATNAAGPAVVGHKVVIATGAAPARSLANHLLPDKSTRDLPHILGYDDILA ECCCCCCEEEEECCCCCEEECCEEEEEECCCHHHHHHHHHCCCCCCCCCCHHCCCHHHCC PGAAERIQGKSVMVYGGGPTAAWAMEVAKGHAGSSMWVARNGFGVAEAAGPRVGAIIEGS CCCHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHCCCCCEEEEEECC RDCQIRGEIEAIRPLGSGEAGGEPRLRVVVASETSGKAVERKSVDVDYLVNSIGQDAYAP CCCEEECCEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHHHCCCHHHHHHHHCCCCCCC GGLHDVLSADIKAELQPIPDRNRVSGVPGTMLGFGTETGDLQIIGAAAASYQDASRGLKP CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEECHHHHHHHHCCCCC GRLASETLPRSGKIGITIGGVVASVAALTDYMPMRQNPATGEMKVTGLNLHVMNATQLAV CCHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCEEEEE YLTGAYPDAPAERINTTVEQYLAARSCTEFGLPDVELQAFMEARLGPLPRIEGIAAEPGA EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC RSSAA CCCCC >Mature Secondary Structure MMHSSACARSGRQPPSSPAQPAAVHETSTTDRPLSLAGRPGAPGFSSAEALAGGIRARAR CCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCC STPAPAEQAIRPRSHAMASTRGHAAGLPPEPAADPSTVKTRGGPDSALNGFLSGMKEGDK CCCCCHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCC ALFVVGGGTAALTYLSTVDLDSRFTHVVVVGDQGYWNRVGHRLAQPHHILALPHEDSAGF EEEEEECCCEEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCC VDPGRHDALRRILPHDDRSAYVHSRDYQARLARLGQYTRGLLESQGRKVLFAGGVSVGKI CCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEECEE TKSDGAGYRIATNAAGPAVVGHKVVIATGAAPARSLANHLLPDKSTRDLPHILGYDDILA ECCCCCCEEEEECCCCCEEECCEEEEEECCCHHHHHHHHHCCCCCCCCCCHHCCCHHHCC PGAAERIQGKSVMVYGGGPTAAWAMEVAKGHAGSSMWVARNGFGVAEAAGPRVGAIIEGS CCCHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHCCCCCEEEEEECC RDCQIRGEIEAIRPLGSGEAGGEPRLRVVVASETSGKAVERKSVDVDYLVNSIGQDAYAP CCCEEECCEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHHHCCCHHHHHHHHCCCCCCC GGLHDVLSADIKAELQPIPDRNRVSGVPGTMLGFGTETGDLQIIGAAAASYQDASRGLKP CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEECHHHHHHHHCCCCC GRLASETLPRSGKIGITIGGVVASVAALTDYMPMRQNPATGEMKVTGLNLHVMNATQLAV CCHHHHHCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCEEEEE YLTGAYPDAPAERINTTVEQYLAARSCTEFGLPDVELQAFMEARLGPLPRIEGIAAEPGA EEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC RSSAA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA