Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120609691

Identifier: 120609691

GI number: 120609691

Start: 1094201

End: 1094815

Strand: Direct

Name: 120609691

Synonym: Aave_0997

Alternate gene names: NA

Gene position: 1094201-1094815 (Clockwise)

Preceding gene: 120609690

Following gene: 120609692

Centisome position: 20.44

GC content: 65.04

Gene sequence:

>615_bases
GTGATTCTCATCAACCTGCTGCCCCACCGCGAGGCAGCCCGGAAACGCCGCAAGGAAGCCTTCCAGGTGGCGATGTTCGC
GTCGTTCCTGATGGGCCTCGCGATCGCCGCCGTCGTCTATTGGTGGTTCCAGATGATGATCGGAGAGCAGCAGGGGCGCA
ATGCCTTCCTGCAGTCCGAGATCCAGGTCCTGGAGGGGCAGATCAAGGAAATCGCCACGATCGAAGAGGAAATCGCTGCC
CTGCGTGCGCGCCAGAAGGCGGTGGAGGATCTCCAGTCCGACCGCAACCTGCCCGTCCATCTGCTTTCGGAACTGGTGCG
GCAGCTGCCTGACGGTGTCTACATCACGAGTCTGAAGCAGGCGGACCAGGTCATCACCATGCAGGGCATGGCGCAATCCA
ACGAGCGCGTCTCGGAGATGCTGCGCAACCTGGCGGACAACACCCCGTGGTTCTCCAAGCCCGAGCTGGTGGAGATCGTG
GCCACGAACGTGGCCCTGACGCCGCGCGACCAGCGCCGGGTGGCTTCGTTCAACGTGCGTTTCCGGCTCATGCGGACCAG
CGAGGCGCAGAAGGCCATGGACGGCGCGAGCGCGCCGCGCGCGGCGGGGGGATGA

Upstream 100 bases:

>100_bases
AGGGCATGGAGATCGGAAGTTCCGTCCGTCTCAAGAAGATGGTGCGAGAGGCGCCTTCCTACCTGACTTCGTGCGGGCTC
GCCATGCGGAGGTTCCTCCA

Downstream 100 bases:

>100_bases
GCATGGCGACGAGAAAAAAGACATCCGTGGATTTCGGCGCGCTGCAGGACAGTCTGCAGCGGCAATTCAGGAACCTGGAT
CCGAAGGACCCCTCCCTCTG

Product: fimbrial assembly family protein

Products: NA

Alternate protein names: Fimbrial Assembly; Type 4 Fimbrial Biogenesis Protein PilN; Tfp Pilus Assembly Protein PilN; Fimbrial Assembly Protein; Type IV Pilus Biogenesis Protein PilN; Periplasmic Sensor Signal Transduction Histidine Kinase; Tfp Pilus Assembly Protein; Type IV Pilus Assembly Protein PilN; PilN Type IV Pilus Assembly Protein; Type IV Pilus Biogenesis Fimbrial Assembly; Fimbrial Assembly Membrane Protein; Type 4 Fimbrial Biogenesis Protein; Type IV Fimbrial Biogenesis Protein PilN; Type IV Pilus Assembly Protein Piln; Fimbrial Type-4 Assembly Transmembrane Protein

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MILINLLPHREAARKRRKEAFQVAMFASFLMGLAIAAVVYWWFQMMIGEQQGRNAFLQSEIQVLEGQIKEIATIEEEIAA
LRARQKAVEDLQSDRNLPVHLLSELVRQLPDGVYITSLKQADQVITMQGMAQSNERVSEMLRNLADNTPWFSKPELVEIV
ATNVALTPRDQRRVASFNVRFRLMRTSEAQKAMDGASAPRAAGG

Sequences:

>Translated_204_residues
MILINLLPHREAARKRRKEAFQVAMFASFLMGLAIAAVVYWWFQMMIGEQQGRNAFLQSEIQVLEGQIKEIATIEEEIAA
LRARQKAVEDLQSDRNLPVHLLSELVRQLPDGVYITSLKQADQVITMQGMAQSNERVSEMLRNLADNTPWFSKPELVEIV
ATNVALTPRDQRRVASFNVRFRLMRTSEAQKAMDGASAPRAAGG
>Mature_204_residues
MILINLLPHREAARKRRKEAFQVAMFASFLMGLAIAAVVYWWFQMMIGEQQGRNAFLQSEIQVLEGQIKEIATIEEEIAA
LRARQKAVEDLQSDRNLPVHLLSELVRQLPDGVYITSLKQADQVITMQGMAQSNERVSEMLRNLADNTPWFSKPELVEIV
ATNVALTPRDQRRVASFNVRFRLMRTSEAQKAMDGASAPRAAGG

Specific function: Unknown

COG id: COG3166

COG function: function code NU; Tfp pilus assembly protein PilN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23025; Mature: 23025

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILINLLPHREAARKRRKEAFQVAMFASFLMGLAIAAVVYWWFQMMIGEQQGRNAFLQSE
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IQVLEGQIKEIATIEEEIAALRARQKAVEDLQSDRNLPVHLLSELVRQLPDGVYITSLKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEHHHHH
ADQVITMQGMAQSNERVSEMLRNLADNTPWFSKPELVEIVATNVALTPRDQRRVASFNVR
HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEECCCHHHHHHHHHHH
FRLMRTSEAQKAMDGASAPRAAGG
EEEEHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MILINLLPHREAARKRRKEAFQVAMFASFLMGLAIAAVVYWWFQMMIGEQQGRNAFLQSE
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IQVLEGQIKEIATIEEEIAALRARQKAVEDLQSDRNLPVHLLSELVRQLPDGVYITSLKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEHHHHH
ADQVITMQGMAQSNERVSEMLRNLADNTPWFSKPELVEIVATNVALTPRDQRRVASFNVR
HHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCEECCCHHHHHHHHHHH
FRLMRTSEAQKAMDGASAPRAAGG
EEEEHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA