Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is pucI [H]
Identifier: 120609662
GI number: 120609662
Start: 1062067
End: 1063536
Strand: Direct
Name: pucI [H]
Synonym: Aave_0968
Alternate gene names: 120609662
Gene position: 1062067-1063536 (Clockwise)
Preceding gene: 120609661
Following gene: 120609663
Centisome position: 19.84
GC content: 67.35
Gene sequence:
>1470_bases ATGATGAACAGTCCAGGCGGCGCGGCACCGATGGCAACCGCAACCACCACCTTTCCGGGCGGGCAGGACGCATCGCTCGC GAACGAAGACCTGCTGCCCACCACCGCTGCGCAAAGACACTGGGCCTGGAAGGACTATGCCGCCCTGTGGATCGGCATGG TGGTCTGCGTGCCCACGTACACCATGGCCAGCTCCATGCTGGACCAGGGCTTTTCCTGGCAGATGGCCGTGTGGCTGGTG TTCCTGGCCAACTGCATCGTGCTGGTGCCCATGGTGCTGATCGGCCGCGTGGGCCCGAAGTACGGCGTGCCATTCCCGGT GCTGGCGCGGGCCCCGTTCGGCGTCAAGGGCGCCAACCTGCCGGCGGTGCTGCGCGGACTGGTGGCCTGCGGCTGGTTTT CCATCAACTGCTATTTCGGGGCGCTGGCGCTGCACGGCTTCCTGAACATCCTGGGCCTGGGGCTCCCGGGGCCTGCCGAG GGGCAGACCATCAGCACCTCGCAGTTCGTGTGCTTCCTGGCCTTCTGGGCCGTGCACATCTGGTTCATCTGGAAGGGGCC GGAGTCGATCCGCAAGCTGGAGGTGATCGCGGCGCCGCTGATGATCGCGGCGTCCGTCCTGCTGGTGGTCGTGCTGCTGG TGCGCGTGCCGCCCAGCCAGCTGTTCAACCTGCCCGCCAAGGTAGTGGAGGGCGGGCCCAGGACATGGGCCGCGCTGACC GGCCTGGTAGGGTTCTGGGCCACGCTGGCGCTGAACATTCCCGACTTCACGCGCTTCGCCCGCTCGCAGAAGGACCAGGT GCTGGGCCAGGCCATCGGCCTGCCCATTCCCATGGCGCTGTTCTCGATGGTGGGCGTGATCGGCTTCTCGGCATCGGCCA TCCTGTATGGCAAGGCGCAGCTGTTTCCGGACGGCCTGCTCACGCAGATGGGCAGCGTGGCCGCCGGGCTGGGCCTGCTG GTGATCCTGCTGGCCAACCTGACGACGAACGTGGCGGCCAACCTGGTGTCGCCCTCCTATGATTTCAGCCAGATCGCGCC GTCGAAGATCAGCTTCCGCATGGGCGGCGTGATCGCCGCGCTGCTCGGCCTGCTGTTCATGCCCTGGAAGCTGCTGGCCA CGTCCGGAAGCTACCTCTTCGTCTGGCTGGGCGGCTACGGCACGCTGCTGGGCGCCATCGCCGGCATCCTGCTGGTCGAT TACTACCTCGTGCGCAAGACCCAGCTGAAGGTGGAAGACCTCTACCGCCGCGGCGGCGACTACGAATACACCAACGGCTG GAACGTGCACGCGCTCGTGGCTTTCCTGCTCGGCGTGCTGCCGTGCCTGCCGGGCTACCTGGCCGTGTCGGGCGTGGTGG ACAAGGCCGGCATGCCCGCCATCTGGCTCACGCTGTTCGACTCGGGCTGGTTCTTCAGCCTCGCCGTGGCAGGCCTGTAC TACTTCGCGACCGCCCGGAGGCCGCGGTAG
Upstream 100 bases:
>100_bases CTGGACCACGCATCCCAACAACCCGCAGCGCGTCGCTACGGCCACGGCCACGGTCGCCGCCTGACGTCATCCATCCAGCC CCTCATTCAGGAGTGACGAC
Downstream 100 bases:
>100_bases CGGCCCCGCCGGCCCGCCGCGGCGCAGCGCTCTGCCCGCGGCCGGGCACTTTCCTTCCAGAGACAAGGAGAACCCATGAC CCCCAGCCTTCTGATCCGCG
Product: cytosine/purines, uracil, thiamine, allantoin permease
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MMNSPGGAAPMATATTTFPGGQDASLANEDLLPTTAAQRHWAWKDYAALWIGMVVCVPTYTMASSMLDQGFSWQMAVWLV FLANCIVLVPMVLIGRVGPKYGVPFPVLARAPFGVKGANLPAVLRGLVACGWFSINCYFGALALHGFLNILGLGLPGPAE GQTISTSQFVCFLAFWAVHIWFIWKGPESIRKLEVIAAPLMIAASVLLVVVLLVRVPPSQLFNLPAKVVEGGPRTWAALT GLVGFWATLALNIPDFTRFARSQKDQVLGQAIGLPIPMALFSMVGVIGFSASAILYGKAQLFPDGLLTQMGSVAAGLGLL VILLANLTTNVAANLVSPSYDFSQIAPSKISFRMGGVIAALLGLLFMPWKLLATSGSYLFVWLGGYGTLLGAIAGILLVD YYLVRKTQLKVEDLYRRGGDYEYTNGWNVHALVAFLLGVLPCLPGYLAVSGVVDKAGMPAIWLTLFDSGWFFSLAVAGLY YFATARRPR
Sequences:
>Translated_489_residues MMNSPGGAAPMATATTTFPGGQDASLANEDLLPTTAAQRHWAWKDYAALWIGMVVCVPTYTMASSMLDQGFSWQMAVWLV FLANCIVLVPMVLIGRVGPKYGVPFPVLARAPFGVKGANLPAVLRGLVACGWFSINCYFGALALHGFLNILGLGLPGPAE GQTISTSQFVCFLAFWAVHIWFIWKGPESIRKLEVIAAPLMIAASVLLVVVLLVRVPPSQLFNLPAKVVEGGPRTWAALT GLVGFWATLALNIPDFTRFARSQKDQVLGQAIGLPIPMALFSMVGVIGFSASAILYGKAQLFPDGLLTQMGSVAAGLGLL VILLANLTTNVAANLVSPSYDFSQIAPSKISFRMGGVIAALLGLLFMPWKLLATSGSYLFVWLGGYGTLLGAIAGILLVD YYLVRKTQLKVEDLYRRGGDYEYTNGWNVHALVAFLLGVLPCLPGYLAVSGVVDKAGMPAIWLTLFDSGWFFSLAVAGLY YFATARRPR >Mature_489_residues MMNSPGGAAPMATATTTFPGGQDASLANEDLLPTTAAQRHWAWKDYAALWIGMVVCVPTYTMASSMLDQGFSWQMAVWLV FLANCIVLVPMVLIGRVGPKYGVPFPVLARAPFGVKGANLPAVLRGLVACGWFSINCYFGALALHGFLNILGLGLPGPAE GQTISTSQFVCFLAFWAVHIWFIWKGPESIRKLEVIAAPLMIAASVLLVVVLLVRVPPSQLFNLPAKVVEGGPRTWAALT GLVGFWATLALNIPDFTRFARSQKDQVLGQAIGLPIPMALFSMVGVIGFSASAILYGKAQLFPDGLLTQMGSVAAGLGLL VILLANLTTNVAANLVSPSYDFSQIAPSKISFRMGGVIAALLGLLFMPWKLLATSGSYLFVWLGGYGTLLGAIAGILLVD YYLVRKTQLKVEDLYRRGGDYEYTNGWNVHALVAFLLGVLPCLPGYLAVSGVVDKAGMPAIWLTLFDSGWFFSLAVAGLY YFATARRPR
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=441, Percent_Identity=32.4263038548753, Blast_Score=196, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6319495, Length=460, Percent_Identity=30.4347826086957, Blast_Score=196, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6322219, Length=451, Percent_Identity=29.490022172949, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6319429, Length=495, Percent_Identity=27.6767676767677, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6324645, Length=455, Percent_Identity=23.956043956044, Blast_Score=119, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6323266, Length=455, Percent_Identity=23.7362637362637, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6324766, Length=437, Percent_Identity=23.3409610983982, Blast_Score=115, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 52412; Mature: 52412
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNSPGGAAPMATATTTFPGGQDASLANEDLLPTTAAQRHWAWKDYAALWIGMVVCVPTY CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH TMASSMLDQGFSWQMAVWLVFLANCIVLVPMVLIGRVGPKYGVPFPVLARAPFGVKGANL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCH PAVLRGLVACGWFSINCYFGALALHGFLNILGLGLPGPAEGQTISTSQFVCFLAFWAVHI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHH WFIWKGPESIRKLEVIAAPLMIAASVLLVVVLLVRVPPSQLFNLPAKVVEGGPRTWAALT EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCHHHHHHH GLVGFWATLALNIPDFTRFARSQKDQVLGQAIGLPIPMALFSMVGVIGFSASAILYGKAQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECHH LFPDGLLTQMGSVAAGLGLLVILLANLTTNVAANLVSPSYDFSQIAPSKISFRMGGVIAA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHH LLGLLFMPWKLLATSGSYLFVWLGGYGTLLGAIAGILLVDYYLVRKTQLKVEDLYRRGGD HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YEYTNGWNVHALVAFLLGVLPCLPGYLAVSGVVDKAGMPAIWLTLFDSGWFFSLAVAGLY CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEHHCCCHHHHHHHHHHH YFATARRPR HHHHCCCCC >Mature Secondary Structure MMNSPGGAAPMATATTTFPGGQDASLANEDLLPTTAAQRHWAWKDYAALWIGMVVCVPTY CCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH TMASSMLDQGFSWQMAVWLVFLANCIVLVPMVLIGRVGPKYGVPFPVLARAPFGVKGANL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCH PAVLRGLVACGWFSINCYFGALALHGFLNILGLGLPGPAEGQTISTSQFVCFLAFWAVHI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHHHHHHH WFIWKGPESIRKLEVIAAPLMIAASVLLVVVLLVRVPPSQLFNLPAKVVEGGPRTWAALT EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCHHHHHHH GLVGFWATLALNIPDFTRFARSQKDQVLGQAIGLPIPMALFSMVGVIGFSASAILYGKAQ HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECHH LFPDGLLTQMGSVAAGLGLLVILLANLTTNVAANLVSPSYDFSQIAPSKISFRMGGVIAA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHH LLGLLFMPWKLLATSGSYLFVWLGGYGTLLGAIAGILLVDYYLVRKTQLKVEDLYRRGGD HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YEYTNGWNVHALVAFLLGVLPCLPGYLAVSGVVDKAGMPAIWLTLFDSGWFFSLAVAGLY CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEHHCCCHHHHHHHHHHH YFATARRPR HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]