Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609656
Identifier: 120609656
GI number: 120609656
Start: 1051877
End: 1053013
Strand: Direct
Name: 120609656
Synonym: Aave_0962
Alternate gene names: NA
Gene position: 1051877-1053013 (Clockwise)
Preceding gene: 120609655
Following gene: 120609657
Centisome position: 19.65
GC content: 65.26
Gene sequence:
>1137_bases ATGCGCGCGCTCATTCTCAGCACGCAATCATTCATTGATGGCGGCACCAAGGTCGGCTCGCAGTACCTGGCGCACGTACT TGCCGCAAACGGATGGCAAGTGGACTATGTGCCTACTTTGTCATCTCCGGTGGACCTCATCGGGCGGCAGCGCCACGCGC GTCTGGGCCGCGCATGGGGCGGGAAGCAGGCAGGTCGATTGGCCCCGGGACTGGTGGAGTGGAGCGTGCGCGCGCCCTTT CCCGCCCATCGCTGGTTTCTGCGGCATGCATGGCAACTGACTGCATATGGCAAGTGGTTGCCGCAACGTCTGCGGGACAC GGACTATGACCTGTGCCTGGCGGACGTGGCTCCGAATCTGCTGCTGTTGCCACACGTCCGGGCGCGCGTGAACATCTGCC GGCTGAACGACTGGCCCTGGGGGTTTGCCAGGGATCTGCATCCGATAGTGCCGCGCCAGATCGAAGCCACGCTGGGCAGC GGCAGGTTCGCGGAAGTCTGGGCGGTGTCGCAGCCACTGCTGGGTTATGCCCAGTCGCTGCATTCGCCTGCCCAGGTCGT CCTCATGCCGAACGGTGTCGAGCCCGGGTTGCTGCCTGGGAGCGGCTCCAGGGGCGGCGCCCTCAAGCCGCGGAGCGCCG TGTACGTGGGTGCGATAGCCGCATGGTTCGACAGGGGGCTTCTTGCGGCGGTGGCGAGGCGGATGCCTGGATGGACATTC GACGTCTATGGCCCGGGAGGCGCTCCCAGGCCAGAAGATCCTCCCAACCTGCAATGGCGGGGCTGCCTCAGCCGGGACAT GTTGCCGGACACCCTGGCGCAGTACGAGGTCGGACTCATTCCTTTTCAGGATGTCGACGGACGAATGCGATACGTGGAGC GCCCCATGAAGTTCTATGAGTACATTGCCGCAGGCCTGGGGGTGGCGAGCACGGACCTCGGCGCGTTGCGCCAGGGCATG GGGGATCTCGCGTGCTACGGCAACGGCGTGGATGGTTTCGTGCAAGCCATTGAGCAGGCCCGTGTCCAGGCTTCCGTGCG GCCCGCCGGGTTCCGGAAGATGTTCATCTCTGAAAACAGTTGGGATGCGCGCGCCCGTGACATGCAGGAGCGCCTCTCGG CGCTGTTGGCCCGATGA
Upstream 100 bases:
>100_bases GAGACTGTGCAGGCTGCCGGCACGACGCCCGATCGCTGCGGTGCGGGAAGGGGCTTTGCCCGACGCGGCGGCTTGCTGCC GCTGAAGAGGGCTTACTGAC
Downstream 100 bases:
>100_bases CGGATGGCAGTGCAATTTCCCGGCACTACCTGCTCTACGACTTCATGCAGGTAGCCGGTGGCGCGGAGCGCGTGACGCTG ACCCTGGCCGAAGCGTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MRALILSTQSFIDGGTKVGSQYLAHVLAANGWQVDYVPTLSSPVDLIGRQRHARLGRAWGGKQAGRLAPGLVEWSVRAPF PAHRWFLRHAWQLTAYGKWLPQRLRDTDYDLCLADVAPNLLLLPHVRARVNICRLNDWPWGFARDLHPIVPRQIEATLGS GRFAEVWAVSQPLLGYAQSLHSPAQVVLMPNGVEPGLLPGSGSRGGALKPRSAVYVGAIAAWFDRGLLAAVARRMPGWTF DVYGPGGAPRPEDPPNLQWRGCLSRDMLPDTLAQYEVGLIPFQDVDGRMRYVERPMKFYEYIAAGLGVASTDLGALRQGM GDLACYGNGVDGFVQAIEQARVQASVRPAGFRKMFISENSWDARARDMQERLSALLAR
Sequences:
>Translated_378_residues MRALILSTQSFIDGGTKVGSQYLAHVLAANGWQVDYVPTLSSPVDLIGRQRHARLGRAWGGKQAGRLAPGLVEWSVRAPF PAHRWFLRHAWQLTAYGKWLPQRLRDTDYDLCLADVAPNLLLLPHVRARVNICRLNDWPWGFARDLHPIVPRQIEATLGS GRFAEVWAVSQPLLGYAQSLHSPAQVVLMPNGVEPGLLPGSGSRGGALKPRSAVYVGAIAAWFDRGLLAAVARRMPGWTF DVYGPGGAPRPEDPPNLQWRGCLSRDMLPDTLAQYEVGLIPFQDVDGRMRYVERPMKFYEYIAAGLGVASTDLGALRQGM GDLACYGNGVDGFVQAIEQARVQASVRPAGFRKMFISENSWDARARDMQERLSALLAR >Mature_378_residues MRALILSTQSFIDGGTKVGSQYLAHVLAANGWQVDYVPTLSSPVDLIGRQRHARLGRAWGGKQAGRLAPGLVEWSVRAPF PAHRWFLRHAWQLTAYGKWLPQRLRDTDYDLCLADVAPNLLLLPHVRARVNICRLNDWPWGFARDLHPIVPRQIEATLGS GRFAEVWAVSQPLLGYAQSLHSPAQVVLMPNGVEPGLLPGSGSRGGALKPRSAVYVGAIAAWFDRGLLAAVARRMPGWTF DVYGPGGAPRPEDPPNLQWRGCLSRDMLPDTLAQYEVGLIPFQDVDGRMRYVERPMKFYEYIAAGLGVASTDLGALRQGM GDLACYGNGVDGFVQAIEQARVQASVRPAGFRKMFISENSWDARARDMQERLSALLAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41718; Mature: 41718
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALILSTQSFIDGGTKVGSQYLAHVLAANGWQVDYVPTLSSPVDLIGRQRHARLGRAWG CCEEEEECHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCHHHHHHHHCCC GKQAGRLAPGLVEWSVRAPFPAHRWFLRHAWQLTAYGKWLPQRLRDTDYDLCLADVAPNL CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCE LLLPHVRARVNICRLNDWPWGFARDLHPIVPRQIEATLGSGRFAEVWAVSQPLLGYAQSL EEECCHHHEEEEEEECCCCCCHHCCCCCCCCHHHHHHHCCCCEEEHHHHCCHHHHHHHHC HSPAQVVLMPNGVEPGLLPGSGSRGGALKPRSAVYVGAIAAWFDRGLLAAVARRMPGWTF CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE DVYGPGGAPRPEDPPNLQWRGCLSRDMLPDTLAQYEVGLIPFQDVDGRMRYVERPMKFYE EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH YIAAGLGVASTDLGALRQGMGDLACYGNGVDGFVQAIEQARVQASVRPAGFRKMFISENS HHHHHCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC WDARARDMQERLSALLAR CCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRALILSTQSFIDGGTKVGSQYLAHVLAANGWQVDYVPTLSSPVDLIGRQRHARLGRAWG CCEEEEECHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHCCHHHHHHHHCCC GKQAGRLAPGLVEWSVRAPFPAHRWFLRHAWQLTAYGKWLPQRLRDTDYDLCLADVAPNL CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCE LLLPHVRARVNICRLNDWPWGFARDLHPIVPRQIEATLGSGRFAEVWAVSQPLLGYAQSL EEECCHHHEEEEEEECCCCCCHHCCCCCCCCHHHHHHHCCCCEEEHHHHCCHHHHHHHHC HSPAQVVLMPNGVEPGLLPGSGSRGGALKPRSAVYVGAIAAWFDRGLLAAVARRMPGWTF CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE DVYGPGGAPRPEDPPNLQWRGCLSRDMLPDTLAQYEVGLIPFQDVDGRMRYVERPMKFYE EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH YIAAGLGVASTDLGALRQGMGDLACYGNGVDGFVQAIEQARVQASVRPAGFRKMFISENS HHHHHCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC WDARARDMQERLSALLAR CCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA