Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is hipO [H]
Identifier: 120609629
GI number: 120609629
Start: 1016686
End: 1017933
Strand: Direct
Name: hipO [H]
Synonym: Aave_0935
Alternate gene names: 120609629
Gene position: 1016686-1017933 (Clockwise)
Preceding gene: 120609628
Following gene: 120609630
Centisome position: 18.99
GC content: 69.87
Gene sequence:
>1248_bases ATGGCGGTCGCAGCAGCCAAGCCGGCACTGTCCGCGCCGCCCCGCCTGCGGGCCGGCGGCCGCGCCTTCGCCCACATCGC CCAGTTCCACCCCGAGCTGACCGCGTTCCGCCGCGACCTGCATGCCCATCCCGAACTGGGTTTCGAAGAGGTCTATACGG GCTCCCGCGTGAAGGAGGCGCTCAAGGTCTGCGGGGTGGACGAGATCCACGACGGCATCGGCCGTACCGGCATCGTGGCG GTGATCCACGGGCGCAGCCGTTCCAGCGGCAGCATGATCGGCCTGCGCGCCGACATGGACGCCCTGCCCATGTCGGAGCA GAACGAGTTCACCTGGAAGTCCTGCAAACCCGGACTCATGCACGGCTGCGGTCACGACGGCCACACGGCCATGCTGGTGG GGGCCGCGCGCTACCTCGCCGCCACGCGCCATTTCGACGGCACGGCCGTGCTCATCTTCCAGCCCGGCGAGGAGGGCTTC GGCGGTGCGCGCGTGATGATCGAGGACGGCCTGTTCGAGCGCTTTCCCGTGCAGTCGGTCTATGCCATGCACAACTGGCC GGCCATGCAGCCGGGCACCATCGGACTCAATTCCGGGGCGATGATGGCATCGGCCGACCGCATCACCATCGAGATCACCG GCCGCGGCGGACATGGTGCGCACCCGTACCAGACGGTGGACGTGGTGCTCGTGGCCGCGCACATCATCACCGCGGTGCAG GGCATCGTCTCGCGCAACGTGCGCCCGCTCGACAGCGCGGTGATCAGCCTCTGCGCCATGCAGGCGGGCGACCTCGGGGC CTTCAGCGTGCTGCCCGGCACGGCCACGCTGGTGGGCACGGTGCGCACGTTCTCGCCCGCGGTGCAGGAGATGATCGAGC AGCGCCTCAAGGACCTGTGCAGCGCGGTGGCGCTGGGCTTCGGCGCCACGGCCTCCGTGCGCTACGAACGCATCTACCCC GCGACCATCAACACCGAAAGCGACGCGCAGTTCGCGGGCGACGTGGCAGTGTCGATCGTCGGGGCCGAGAACGTGGTGCG CGACCTGGAGCCCAGCATGGGCGCGGAAGACTTCTCCTTCATGCTGCAGAGCAAGCCGGGCGCCTACCTGCGCATCGGGC AGGGCACCGGGCCCGGCCACAGCGCGCTGCACAACAGCCGGTACGACTTCAACGACGAGATCCTGCCCCTGGGCGCCGCG CTGCACGCGGGCCTGGTCGAGCAGGCCATGCCGCTGGCAGCGGTCTGA
Upstream 100 bases:
>100_bases CTGATCGCACTGATCTTCGTGGTGATCAACCTGGTCGTGGACCTGCTGTATTTCGCGGTCGATCCCCGCCTGCGGGTGGG CAAGGCGGGAGGGCACTGAC
Downstream 100 bases:
>100_bases GGTATGACGATGAATTTCCCACGCACGGCATTGCGCGCCGCCTTCGGCGCCTCCCTGATCGCGGCGGCCTGCATGGCGGG CGCGCAGACCATCCGGGTCG
Product: amidohydrolase
Products: NA
Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MAVAAAKPALSAPPRLRAGGRAFAHIAQFHPELTAFRRDLHAHPELGFEEVYTGSRVKEALKVCGVDEIHDGIGRTGIVA VIHGRSRSSGSMIGLRADMDALPMSEQNEFTWKSCKPGLMHGCGHDGHTAMLVGAARYLAATRHFDGTAVLIFQPGEEGF GGARVMIEDGLFERFPVQSVYAMHNWPAMQPGTIGLNSGAMMASADRITIEITGRGGHGAHPYQTVDVVLVAAHIITAVQ GIVSRNVRPLDSAVISLCAMQAGDLGAFSVLPGTATLVGTVRTFSPAVQEMIEQRLKDLCSAVALGFGATASVRYERIYP ATINTESDAQFAGDVAVSIVGAENVVRDLEPSMGAEDFSFMLQSKPGAYLRIGQGTGPGHSALHNSRYDFNDEILPLGAA LHAGLVEQAMPLAAV
Sequences:
>Translated_415_residues MAVAAAKPALSAPPRLRAGGRAFAHIAQFHPELTAFRRDLHAHPELGFEEVYTGSRVKEALKVCGVDEIHDGIGRTGIVA VIHGRSRSSGSMIGLRADMDALPMSEQNEFTWKSCKPGLMHGCGHDGHTAMLVGAARYLAATRHFDGTAVLIFQPGEEGF GGARVMIEDGLFERFPVQSVYAMHNWPAMQPGTIGLNSGAMMASADRITIEITGRGGHGAHPYQTVDVVLVAAHIITAVQ GIVSRNVRPLDSAVISLCAMQAGDLGAFSVLPGTATLVGTVRTFSPAVQEMIEQRLKDLCSAVALGFGATASVRYERIYP ATINTESDAQFAGDVAVSIVGAENVVRDLEPSMGAEDFSFMLQSKPGAYLRIGQGTGPGHSALHNSRYDFNDEILPLGAA LHAGLVEQAMPLAAV >Mature_414_residues AVAAAKPALSAPPRLRAGGRAFAHIAQFHPELTAFRRDLHAHPELGFEEVYTGSRVKEALKVCGVDEIHDGIGRTGIVAV IHGRSRSSGSMIGLRADMDALPMSEQNEFTWKSCKPGLMHGCGHDGHTAMLVGAARYLAATRHFDGTAVLIFQPGEEGFG GARVMIEDGLFERFPVQSVYAMHNWPAMQPGTIGLNSGAMMASADRITIEITGRGGHGAHPYQTVDVVLVAAHIITAVQG IVSRNVRPLDSAVISLCAMQAGDLGAFSVLPGTATLVGTVRTFSPAVQEMIEQRLKDLCSAVALGFGATASVRYERIYPA TINTESDAQFAGDVAVSIVGAENVVRDLEPSMGAEDFSFMLQSKPGAYLRIGQGTGPGHSALHNSRYDFNDEILPLGAAL HAGLVEQAMPLAAV
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=423, Percent_Identity=27.6595744680851, Blast_Score=103, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.32 [H]
Molecular weight: Translated: 43906; Mature: 43774
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVAAAKPALSAPPRLRAGGRAFAHIAQFHPELTAFRRDLHAHPELGFEEVYTGSRVKEA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHH LKVCGVDEIHDGIGRTGIVAVIHGRSRSSGSMIGLRADMDALPMSEQNEFTWKSCKPGLM HHHCCHHHHHHCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCCCHH HGCGHDGHTAMLVGAARYLAATRHFDGTAVLIFQPGEEGFGGARVMIEDGLFERFPVQSV HCCCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCHHHCCHHHH YAMHNWPAMQPGTIGLNSGAMMASADRITIEITGRGGHGAHPYQTVDVVLVAAHIITAVQ HHHCCCCCCCCCCEECCCCCEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH GIVSRNVRPLDSAVISLCAMQAGDLGAFSVLPGTATLVGTVRTFSPAVQEMIEQRLKDLC HHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHEEEHHHHHCHHHHHHHHHHHHHHH SAVALGFGATASVRYERIYPATINTESDAQFAGDVAVSIVGAENVVRDLEPSMGAEDFSF HHHHHCCCCCCEEEEEEEECEEECCCCCCHHCCCEEEEEECHHHHHHHCCCCCCCHHHHH MLQSKPGAYLRIGQGTGPGHSALHNSRYDFNDEILPLGAALHAGLVEQAMPLAAV HHHCCCCCEEEEECCCCCCHHHHCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AVAAAKPALSAPPRLRAGGRAFAHIAQFHPELTAFRRDLHAHPELGFEEVYTGSRVKEA CCCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHH LKVCGVDEIHDGIGRTGIVAVIHGRSRSSGSMIGLRADMDALPMSEQNEFTWKSCKPGLM HHHCCHHHHHHCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCCCHH HGCGHDGHTAMLVGAARYLAATRHFDGTAVLIFQPGEEGFGGARVMIEDGLFERFPVQSV HCCCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCHHHCCHHHH YAMHNWPAMQPGTIGLNSGAMMASADRITIEITGRGGHGAHPYQTVDVVLVAAHIITAVQ HHHCCCCCCCCCCEECCCCCEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH GIVSRNVRPLDSAVISLCAMQAGDLGAFSVLPGTATLVGTVRTFSPAVQEMIEQRLKDLC HHHHCCCCHHHHHHHHHHHHCCCCCCCEEECCCCHHEEEHHHHHCHHHHHHHHHHHHHHH SAVALGFGATASVRYERIYPATINTESDAQFAGDVAVSIVGAENVVRDLEPSMGAEDFSF HHHHHCCCCCCEEEEEEEECEEECCCCCCHHCCCEEEEEECHHHHHHHCCCCCCCHHHHH MLQSKPGAYLRIGQGTGPGHSALHNSRYDFNDEILPLGAALHAGLVEQAMPLAAV HHHCCCCCEEEEECCCCCCHHHHCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]