Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is ilvA [H]
Identifier: 120609623
GI number: 120609623
Start: 1009793
End: 1011376
Strand: Reverse
Name: ilvA [H]
Synonym: Aave_0929
Alternate gene names: 120609623
Gene position: 1011376-1009793 (Counterclockwise)
Preceding gene: 120609625
Following gene: 120609622
Centisome position: 18.89
GC content: 68.88
Gene sequence:
>1584_bases ATGACGAAGACCTCCCCCCCTGCCCTGACACCCGCCGACTACCTCAAGAAGATCCTGACGGCGCGCGTGTACGACGTGGC CGTCGAGTCGGCACTGGAGCCCGCGCGCGCGCTGGGCCGCCGGCTGCACAACACGGTGCTGCTCAAGCGCGAGGACCAGC AGCCCGTGTTCAGCTTCAAGCTGCGGGGTGCCTACAACAAGATGGCGCACCTGTCTGCCGAGCAGTTGCAGCGCGGCGTG ATCTGCGCCTCGGCCGGCAACCATGCGCAGGGCGTGGCCATGAGCGCCAAGCGCCTGGGCACGCGTGCGGTGGTGGTGAT GCCCACGACCACGCCGCAGCTCAAGGTGGACGCCGTGAAGACGCTGGGCGGCGAGGTCGTGCTGCACGGGGACAGCTACT CCGACGCCTACGAGCACGCCGCGCGCCTGCAGCAGGAGCAGGGCCTGACCTTCGTGCATCCGTTCGACGATCCGGACGTG ATCGCCGGACAGGGCACCATCGCCATGGAAATCCTGCGCCAGCTGCAGAGCCTGGGCAGCAATCGGCTGGACGCGGTGTT CGTGGCGATCGGCGGCGGCGGCCTGGTGAGCGGGGTGGCCAACTACATCAAGGCCGTGCGGCCGGAGATCCGCATCGTCG GCGTGCAGATGAACGATTCCGACGCCATGGCACGCTCGGTCGCGTCCGGCAGCCGCGTGGCGCTCCCCGACGTGGGGCTG TTTTCGGACGGCACGGCCGTGAAGCTGGTGGGCGAGGAGACCTTCCGCGTCGCGAGCGGGCTGGTGGACGAGTTCATCAC GGTGGACACCGACGCCGTCTGCGCGGCGATCAAGGACATCTTCGTGGACACGCGCAGCATCGTGGAGCCCGCCGGGGCCC TGGCGGTGGCGGCCATCAAGCAGTACGTGGCCCAACACAAGACCCGCGGGGAAACGTACGCCGCCATCCTGTGCGGCGCC AACATGAATTTCGACCGCCTGCGCTTCGTCGCGGAGCGTGCCGAAGTGGGCGAAGAGCGCGAGGCGCTGCTGGCGGTGAC GATCCCCGAGGAGCGCGGGAGCTTCCGGCGCTTCTGCGAGGTGGTCGGCCAGTTGCCCGGCGGCCCCCGCAACGTGACGG AGTTCAACTACCGCATCAGCGATGCGTCGCGAGCCCACGTCTTCGTCGGGCTGACCACGCATGGCAAGGGCGAGTCGGAG AAGATCGCGCGCAACTTCCAGCGCCATGGGTTCGAGGCGCTGGACCTCACGCACGACGAACTGACCAAGGAGCACCTGCG GCACCTCGTGGGCGGCCGCTCCGGGCTCGCCCAGGACGAGCGGCTGCTGCGCATCATCTTCCCGGAGCGCCCGGGCGCGC TCTTCAAGTTCCTGAGCATGATGCAGCCAAGCTGGAACATCAGCCTCTTCCACTACCGCAACCAGGGGGCGGACTACGGC CGCATCCTCGTGGGCATGCAGGTGCCGGCGGGCGACGCACAGGCCTTCGAGGCCTTCCTGCAGACGCTGGGCTACCCCTA CGTGGAAGAAACGCAGAACCCCGCGTACCGGCTGTTCCTGCAGGCGCCCGCGGGCCGGGGCTGA
Upstream 100 bases:
>100_bases ATCTCACGATCCGGGGCCGTTTTTTTTTGCCCCGCCCGGCTGGGGCGGGCCGGCTGGGGCAAAGGCCTATGATGTCGGCC CTGCCGCAGCCCACGCATCC
Downstream 100 bases:
>100_bases CGCCTTCCGATCGCCAACGAGAAGCGACCGCCCCGCTGCCCCATGCAGGCCCTTCGCCACTTCCTGCTGGCCGTGCAGTT CTTCACGCGCATCCCCGTGA
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 527; Mature: 526
Protein sequence:
>527_residues MTKTSPPALTPADYLKKILTARVYDVAVESALEPARALGRRLHNTVLLKREDQQPVFSFKLRGAYNKMAHLSAEQLQRGV ICASAGNHAQGVAMSAKRLGTRAVVVMPTTTPQLKVDAVKTLGGEVVLHGDSYSDAYEHAARLQQEQGLTFVHPFDDPDV IAGQGTIAMEILRQLQSLGSNRLDAVFVAIGGGGLVSGVANYIKAVRPEIRIVGVQMNDSDAMARSVASGSRVALPDVGL FSDGTAVKLVGEETFRVASGLVDEFITVDTDAVCAAIKDIFVDTRSIVEPAGALAVAAIKQYVAQHKTRGETYAAILCGA NMNFDRLRFVAERAEVGEEREALLAVTIPEERGSFRRFCEVVGQLPGGPRNVTEFNYRISDASRAHVFVGLTTHGKGESE KIARNFQRHGFEALDLTHDELTKEHLRHLVGGRSGLAQDERLLRIIFPERPGALFKFLSMMQPSWNISLFHYRNQGADYG RILVGMQVPAGDAQAFEAFLQTLGYPYVEETQNPAYRLFLQAPAGRG
Sequences:
>Translated_527_residues MTKTSPPALTPADYLKKILTARVYDVAVESALEPARALGRRLHNTVLLKREDQQPVFSFKLRGAYNKMAHLSAEQLQRGV ICASAGNHAQGVAMSAKRLGTRAVVVMPTTTPQLKVDAVKTLGGEVVLHGDSYSDAYEHAARLQQEQGLTFVHPFDDPDV IAGQGTIAMEILRQLQSLGSNRLDAVFVAIGGGGLVSGVANYIKAVRPEIRIVGVQMNDSDAMARSVASGSRVALPDVGL FSDGTAVKLVGEETFRVASGLVDEFITVDTDAVCAAIKDIFVDTRSIVEPAGALAVAAIKQYVAQHKTRGETYAAILCGA NMNFDRLRFVAERAEVGEEREALLAVTIPEERGSFRRFCEVVGQLPGGPRNVTEFNYRISDASRAHVFVGLTTHGKGESE KIARNFQRHGFEALDLTHDELTKEHLRHLVGGRSGLAQDERLLRIIFPERPGALFKFLSMMQPSWNISLFHYRNQGADYG RILVGMQVPAGDAQAFEAFLQTLGYPYVEETQNPAYRLFLQAPAGRG >Mature_526_residues TKTSPPALTPADYLKKILTARVYDVAVESALEPARALGRRLHNTVLLKREDQQPVFSFKLRGAYNKMAHLSAEQLQRGVI CASAGNHAQGVAMSAKRLGTRAVVVMPTTTPQLKVDAVKTLGGEVVLHGDSYSDAYEHAARLQQEQGLTFVHPFDDPDVI AGQGTIAMEILRQLQSLGSNRLDAVFVAIGGGGLVSGVANYIKAVRPEIRIVGVQMNDSDAMARSVASGSRVALPDVGLF SDGTAVKLVGEETFRVASGLVDEFITVDTDAVCAAIKDIFVDTRSIVEPAGALAVAAIKQYVAQHKTRGETYAAILCGAN MNFDRLRFVAERAEVGEEREALLAVTIPEERGSFRRFCEVVGQLPGGPRNVTEFNYRISDASRAHVFVGLTTHGKGESEK IARNFQRHGFEALDLTHDELTKEHLRHLVGGRSGLAQDERLLRIIFPERPGALFKFLSMMQPSWNISLFHYRNQGADYGR ILVGMQVPAGDAQAFEAFLQTLGYPYVEETQNPAYRLFLQAPAGRG
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=304, Percent_Identity=30.2631578947368, Blast_Score=133, Evalue=5e-31, Organism=Homo sapiens, GI33469958, Length=321, Percent_Identity=28.6604361370716, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI19923959, Length=307, Percent_Identity=26.7100977198697, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI1790207, Length=524, Percent_Identity=51.1450381679389, Blast_Score=502, Evalue=1e-143, Organism=Escherichia coli, GI1789505, Length=332, Percent_Identity=35.8433734939759, Blast_Score=167, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17537387, Length=387, Percent_Identity=31.266149870801, Blast_Score=154, Evalue=8e-38, Organism=Caenorhabditis elegans, GI71991565, Length=373, Percent_Identity=30.0268096514745, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17508781, Length=281, Percent_Identity=29.1814946619217, Blast_Score=122, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6320930, Length=525, Percent_Identity=48, Blast_Score=480, Evalue=1e-136, Organism=Saccharomyces cerevisiae, GI6322631, Length=307, Percent_Identity=33.5504885993485, Blast_Score=146, Evalue=7e-36, Organism=Saccharomyces cerevisiae, GI6319788, Length=228, Percent_Identity=27.6315789473684, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI21355833, Length=312, Percent_Identity=30.7692307692308, Blast_Score=132, Evalue=8e-31, Organism=Drosophila melanogaster, GI24645328, Length=253, Percent_Identity=28.0632411067194, Blast_Score=92, Evalue=7e-19,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 57417; Mature: 57286
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTSPPALTPADYLKKILTARVYDVAVESALEPARALGRRLHNTVLLKREDQQPVFSFK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEE LRGAYNKMAHLSAEQLQRGVICASAGNHAQGVAMSAKRLGTRAVVVMPTTTPQLKVDAVK ECCHHHHHHHCCHHHHHCCEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCEEHHHHH TLGGEVVLHGDSYSDAYEHAARLQQEQGLTFVHPFDDPDVIAGQGTIAMEILRQLQSLGS HCCCEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCEEECCCHHHHHHHHHHHHCCC NRLDAVFVAIGGGGLVSGVANYIKAVRPEIRIVGVQMNDSDAMARSVASGSRVALPDVGL CCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHCCCCEEECCCCCC FSDGTAVKLVGEETFRVASGLVDEFITVDTDAVCAAIKDIFVDTRSIVEPAGALAVAAIK CCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH QYVAQHKTRGETYAAILCGANMNFDRLRFVAERAEVGEEREALLAVTIPEERGSFRRFCE HHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEECHHCCHHHHHHH VVGQLPGGPRNVTEFNYRISDASRAHVFVGLTTHGKGESEKIARNFQRHGFEALDLTHDE HHHCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCEEECCCHHH LTKEHLRHLVGGRSGLAQDERLLRIIFPERPGALFKFLSMMQPSWNISLFHYRNQGADYG HHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCC RILVGMQVPAGDAQAFEAFLQTLGYPYVEETQNPAYRLFLQAPAGRG EEEEEEECCCCCHHHHHHHHHHHCCCCHHCCCCCEEEEEEECCCCCC >Mature Secondary Structure TKTSPPALTPADYLKKILTARVYDVAVESALEPARALGRRLHNTVLLKREDQQPVFSFK CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEE LRGAYNKMAHLSAEQLQRGVICASAGNHAQGVAMSAKRLGTRAVVVMPTTTPQLKVDAVK ECCHHHHHHHCCHHHHHCCEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCEEHHHHH TLGGEVVLHGDSYSDAYEHAARLQQEQGLTFVHPFDDPDVIAGQGTIAMEILRQLQSLGS HCCCEEEEECCCCCHHHHHHHHHHHHCCCEEECCCCCCCEEECCCHHHHHHHHHHHHCCC NRLDAVFVAIGGGGLVSGVANYIKAVRPEIRIVGVQMNDSDAMARSVASGSRVALPDVGL CCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHCCCCEEECCCCCC FSDGTAVKLVGEETFRVASGLVDEFITVDTDAVCAAIKDIFVDTRSIVEPAGALAVAAIK CCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH QYVAQHKTRGETYAAILCGANMNFDRLRFVAERAEVGEEREALLAVTIPEERGSFRRFCE HHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEEECHHCCHHHHHHH VVGQLPGGPRNVTEFNYRISDASRAHVFVGLTTHGKGESEKIARNFQRHGFEALDLTHDE HHHCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCEEECCCHHH LTKEHLRHLVGGRSGLAQDERLLRIIFPERPGALFKFLSMMQPSWNISLFHYRNQGADYG HHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCC RILVGMQVPAGDAQAFEAFLQTLGYPYVEETQNPAYRLFLQAPAGRG EEEEEEECCCCCHHHHHHHHHHHCCCCHHCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA