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The map label for this gene is yqgF [C]

Identifier: 120609602

GI number: 120609602

Start: 990487

End: 990939

Strand: Direct

Name: yqgF [C]

Synonym: Aave_0908

Alternate gene names: 120609602

Gene position: 990487-990939 (Clockwise)

Preceding gene: 120609601

Following gene: 120609603

Centisome position: 18.5

GC content: 71.3

Gene sequence:

>453_bases
ATGAGCGGTCCCATGCCGGACCCCTTGCCCGCCGCTCCAGCCGCCGCACCTTCCGCCGTTCCGGCGCATCTCCAATCATT
CCTGGCCTTCGATTTCGGCGCCAAGCGCACCGGTGTCGCGGTGGGCTCGCGCCTGCTGCGCGCCGCCAGCCCGCAGGCCA
CGATCCGCGCCGAGGGGGCGGATGCGCGCTTTGCCGCCGTGGCCGAGCGGCTGCGCGAGTGGCAGCCCGACGCGCTCGTC
GTCGGCGTGCCGTACCACCCCGACGGGGCCGCGCACGAGAACACCGCGCGCGCGCTGAAATTCGCCCGGCAACTGCGCGG
GCGCTTCGGCCTGCCGGTGTTCGAGGTGGACGAGCGCTACAGCACCACCGAAGCCCATGCGGGCGGTGCGAAAGATGCCG
ATGCCGCATCCGCCTGCATCATCCTGGAGCAGTTCTTGAGGCAACTTCCATGA

Upstream 100 bases:

>100_bases
TGTCCGTGATCTTCGACACCCCCGTGGGCCAGCGTTACGACCGGGCCCTCGCCCTGCTGGGGCTGCAGTCCTGGATGCTC
TCGCCCGAGGCGGGCCACGC

Downstream 100 bases:

>100_bases
CTCCGACGCCAACTTCCGCCCCGCCCGGGGCCCTCGCCCTCGATGCCGAGGCGCTCTACCGCGAACTGCTGTCCGGCGTG
CGCGCTCTGCGCACCCCGCA

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSGPMPDPLPAAPAAAPSAVPAHLQSFLAFDFGAKRTGVAVGSRLLRAASPQATIRAEGADARFAAVAERLREWQPDALV
VGVPYHPDGAAHENTARALKFARQLRGRFGLPVFEVDERYSTTEAHAGGAKDADAASACIILEQFLRQLP

Sequences:

>Translated_150_residues
MSGPMPDPLPAAPAAAPSAVPAHLQSFLAFDFGAKRTGVAVGSRLLRAASPQATIRAEGADARFAAVAERLREWQPDALV
VGVPYHPDGAAHENTARALKFARQLRGRFGLPVFEVDERYSTTEAHAGGAKDADAASACIILEQFLRQLP
>Mature_149_residues
SGPMPDPLPAAPAAAPSAVPAHLQSFLAFDFGAKRTGVAVGSRLLRAASPQATIRAEGADARFAAVAERLREWQPDALVV
GVPYHPDGAAHENTARALKFARQLRGRFGLPVFEVDERYSTTEAHAGGAKDADAASACIILEQFLRQLP

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

Organism=Escherichia coli, GI1789318, Length=133, Percent_Identity=42.8571428571429, Blast_Score=104, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 15856; Mature: 15725

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPMPDPLPAAPAAAPSAVPAHLQSFLAFDFGAKRTGVAVGSRLLRAASPQATIRAEGA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCC
DARFAAVAERLREWQPDALVVGVPYHPDGAAHENTARALKFARQLRGRFGLPVFEVDERY
CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCC
STTEAHAGGAKDADAASACIILEQFLRQLP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGPMPDPLPAAPAAAPSAVPAHLQSFLAFDFGAKRTGVAVGSRLLRAASPQATIRAEGA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCC
DARFAAVAERLREWQPDALVVGVPYHPDGAAHENTARALKFARQLRGRFGLPVFEVDERY
CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCC
STTEAHAGGAKDADAASACIILEQFLRQLP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA