| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120609570
Identifier: 120609570
GI number: 120609570
Start: 952810
End: 953259
Strand: Reverse
Name: 120609570
Synonym: Aave_0876
Alternate gene names: NA
Gene position: 953259-952810 (Counterclockwise)
Preceding gene: 120609571
Following gene: 120609569
Centisome position: 17.81
GC content: 71.78
Gene sequence:
>450_bases ATGAACACCATGACCCGCTGCAAGCCCCCCACGTCCCGGCCCCACTCCACCGCCCGCGCGGCCGCCCTGCTCCTGGCCCT CGGCGCGGCCGCACCGGCCTTCATGGCCCTGCCGGCCTCCGCGCAGCAGGTACAGCCCGGCATGGGCGGCGTGCGCAACT TCCCCGAAGCCGCCCAGCGCGGCACCCTGGTGGTGCTCAGCACGGCCGAGGCCCAGCTCAATGGCAGCACCGTGCGCATG GCGCCCGGCCTGCGCATCTTCAGCCCGCAGAACACGCTGGTGATGGCCCATTCGGTGATCGGCCAGTCGTTCACCGTCAA CTACACGATCGAGCCCGCCACGGGCCTGCTGCACACCGTCTGGATCCTCACCAAGGCGGAGGCCGCGGTGCCCCGCAAGG GCAGCGGCGGCGGCTCTTTCCTCGATTCGCTGTTCGGCTCCGGCACCTGA
Upstream 100 bases:
>100_bases GCTTTTTTCGGGCGGCACAACAACTTCCTGCGCCCCTGCGCTTCCGTCCAGGGAACACCCGCAAGGCCCGGGCCGTAGAA TTCCCCCCTTCAGCCCCTGG
Downstream 100 bases:
>100_bases GGGCGCGGGCTGCACGCAGCGCCCGCCACCGCTCCCGCCTACGCCTTCTCCTGATTGCTCCCGGCCGCCCGCGCACGGCC CGCACCCGGCGCCCGCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MNTMTRCKPPTSRPHSTARAAALLLALGAAAPAFMALPASAQQVQPGMGGVRNFPEAAQRGTLVVLSTAEAQLNGSTVRM APGLRIFSPQNTLVMAHSVIGQSFTVNYTIEPATGLLHTVWILTKAEAAVPRKGSGGGSFLDSLFGSGT
Sequences:
>Translated_149_residues MNTMTRCKPPTSRPHSTARAAALLLALGAAAPAFMALPASAQQVQPGMGGVRNFPEAAQRGTLVVLSTAEAQLNGSTVRM APGLRIFSPQNTLVMAHSVIGQSFTVNYTIEPATGLLHTVWILTKAEAAVPRKGSGGGSFLDSLFGSGT >Mature_149_residues MNTMTRCKPPTSRPHSTARAAALLLALGAAAPAFMALPASAQQVQPGMGGVRNFPEAAQRGTLVVLSTAEAQLNGSTVRM APGLRIFSPQNTLVMAHSVIGQSFTVNYTIEPATGLLHTVWILTKAEAAVPRKGSGGGSFLDSLFGSGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15375; Mature: 15375
Theoretical pI: Translated: 11.42; Mature: 11.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTMTRCKPPTSRPHSTARAAALLLALGAAAPAFMALPASAQQVQPGMGGVRNFPEAAQR CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHCCCCCCCCCCCHHHHHC GTLVVLSTAEAQLNGSTVRMAPGLRIFSPQNTLVMAHSVIGQSFTVNYTIEPATGLLHTV CCEEEEEECCCCCCCCEEEECCCEEEECCCCCEEEEEHHHCCEEEEEEEECCCHHHHHHH WILTKAEAAVPRKGSGGGSFLDSLFGSGT HHHHHHHHCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MNTMTRCKPPTSRPHSTARAAALLLALGAAAPAFMALPASAQQVQPGMGGVRNFPEAAQR CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHCCCCCCCCCCCHHHHHC GTLVVLSTAEAQLNGSTVRMAPGLRIFSPQNTLVMAHSVIGQSFTVNYTIEPATGLLHTV CCEEEEEECCCCCCCCEEEECCCEEEECCCCCEEEEEHHHCCEEEEEEEECCCHHHHHHH WILTKAEAAVPRKGSGGGSFLDSLFGSGT HHHHHHHHCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA