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The map label for this gene is yscT [H]

Identifier: 120609158

GI number: 120609158

Start: 492252

End: 493106

Strand: Direct

Name: yscT [H]

Synonym: Aave_0455

Alternate gene names: 120609158

Gene position: 492252-493106 (Clockwise)

Preceding gene: 120609157

Following gene: 120609159

Centisome position: 9.2

GC content: 68.54

Gene sequence:

>855_bases
ATGTTGGGGTTGCTGGCGCTCTGCTGCGCGCGCTTCTACGCGGCCATGCTGGTGCTGCCGGCGACCAACGACCAGCTGCT
GCTGGGGCGCGTGCGCAACGGGACGGTGCTGCTGCTGGGGGCGTTCGTGGCGTGGGGCCAGCCCTCGGGGTTGCTCGAGT
CCACCAGCCCGCTGGTCTTCATCGCCCTGGTGGTGAAGGAGGCGCTGATCGGCATGCTGATCGGATTCGCCGTCTCCGTG
GTGTTCTGGGCGGCCGAAGGCGTCGGCATGCTGATCGACAACCAGGCGGGATACAACAACATCCAGCAGACCAACCCGCT
CAGCGGCCAACAGAGCACGCCGGTGGGCAACCTGCTCATGCAATTGGCGATCGTGGGCTTCTACATGCTGGGCGGCATGA
TGGTGTTCGTGGGGCTGCTGTTCGACAGCTACGACTGGTGGCCGCTCACGGGGATGATGCCCAGCTGGCCGGTGCTGGCG
GAACGGTTCTTTCCCGACGAGGTCGCCGGCTACGCCCAGACCGTGCTCAAGATCGCGGGGCCGGTGCTCATGACGCTGAT
GCTGATCGACCTGGGCATGGGGCTTCTCAGCAAGGCGGCCGAGAAGCTCGAGCCGGGCAGCCTGGCGCAGCCCATCAAGG
GCGCGGCCACCATGCTCCTGCTGGTGCTGCTGGTGGGGGTCTTTTTCCACCAGGTGCGCGAGCAGCTCACCCTGCGGCCC
GTGGCGCAGCGGCTGGAGCGCATCTTCGCTCCGCGTGACCCGGCGGATTCCGGCCCTGCAGGCGGGGCTTCGCCTTCGGT
GCCCGCGCCGGCCGCTGCCCCTGTCCCTGCCGCGAGCGCCGCTGCAGGCCGATAG

Upstream 100 bases:

>100_bases
GCGCGATCCGGGGCATCGAGGGCGGTGGAGGCCTGACGCGATGGAAGAGTATTTGCAGAATGGATATGCGCTGGTCCGGC
TGGGCGGGGACCTGCACGGC

Downstream 100 bases:

>100_bases
CAGCGCTCCGTCGTCCTGTCTCCATGTCGTGCGCCGGCACGCCCTGCGGGGCGCCCGGCGTCTGGCGCCTCGGGCCCCTT
GCGCACGCTCCGTTCGCTCC

Product: type III secretion protein SpaR/YscT/HrcT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MLGLLALCCARFYAAMLVLPATNDQLLLGRVRNGTVLLLGAFVAWGQPSGLLESTSPLVFIALVVKEALIGMLIGFAVSV
VFWAAEGVGMLIDNQAGYNNIQQTNPLSGQQSTPVGNLLMQLAIVGFYMLGGMMVFVGLLFDSYDWWPLTGMMPSWPVLA
ERFFPDEVAGYAQTVLKIAGPVLMTLMLIDLGMGLLSKAAEKLEPGSLAQPIKGAATMLLLVLLVGVFFHQVREQLTLRP
VAQRLERIFAPRDPADSGPAGGASPSVPAPAAAPVPAASAAAGR

Sequences:

>Translated_284_residues
MLGLLALCCARFYAAMLVLPATNDQLLLGRVRNGTVLLLGAFVAWGQPSGLLESTSPLVFIALVVKEALIGMLIGFAVSV
VFWAAEGVGMLIDNQAGYNNIQQTNPLSGQQSTPVGNLLMQLAIVGFYMLGGMMVFVGLLFDSYDWWPLTGMMPSWPVLA
ERFFPDEVAGYAQTVLKIAGPVLMTLMLIDLGMGLLSKAAEKLEPGSLAQPIKGAATMLLLVLLVGVFFHQVREQLTLRP
VAQRLERIFAPRDPADSGPAGGASPSVPAPAAAPVPAASAAAGR
>Mature_284_residues
MLGLLALCCARFYAAMLVLPATNDQLLLGRVRNGTVLLLGAFVAWGQPSGLLESTSPLVFIALVVKEALIGMLIGFAVSV
VFWAAEGVGMLIDNQAGYNNIQQTNPLSGQQSTPVGNLLMQLAIVGFYMLGGMMVFVGLLFDSYDWWPLTGMMPSWPVLA
ERFFPDEVAGYAQTVLKIAGPVLMTLMLIDLGMGLLSKAAEKLEPGSLAQPIKGAATMLLLVLLVGVFFHQVREQLTLRP
VAQRLERIFAPRDPADSGPAGGASPSVPAPAAAPVPAASAAAGR

Specific function: Component of the yop secretion machinery [H]

COG id: COG4791

COG function: function code U; Type III secretory pathway, component EscT

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002010
- InterPro:   IPR006304 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 29964; Mature: 29964

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGLLALCCARFYAAMLVLPATNDQLLLGRVRNGTVLLLGAFVAWGQPSGLLESTSPLVF
CHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEHHHHHHCCCCCCCCCCCCHHHH
IALVVKEALIGMLIGFAVSVVFWAAEGVGMLIDNQAGYNNIQQTNPLSGQQSTPVGNLLM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH
QLAIVGFYMLGGMMVFVGLLFDSYDWWPLTGMMPSWPVLAERFFPDEVAGYAQTVLKIAG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHH
PVLMTLMLIDLGMGLLSKAAEKLEPGSLAQPIKGAATMLLLVLLVGVFFHQVREQLTLRP
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAQRLERIFAPRDPADSGPAGGASPSVPAPAAAPVPAASAAAGR
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLGLLALCCARFYAAMLVLPATNDQLLLGRVRNGTVLLLGAFVAWGQPSGLLESTSPLVF
CHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEHHHHHHCCCCCCCCCCCCHHHH
IALVVKEALIGMLIGFAVSVVFWAAEGVGMLIDNQAGYNNIQQTNPLSGQQSTPVGNLLM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH
QLAIVGFYMLGGMMVFVGLLFDSYDWWPLTGMMPSWPVLAERFFPDEVAGYAQTVLKIAG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHH
PVLMTLMLIDLGMGLLSKAAEKLEPGSLAQPIKGAATMLLLVLLVGVFFHQVREQLTLRP
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAQRLERIFAPRDPADSGPAGGASPSVPAPAAAPVPAASAAAGR
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9746557; 9748454; 11586360 [H]