Click here to switch to the map view.

The map label for this gene is 120609157

Identifier: 120609157

GI number: 120609157

Start: 491645

End: 492187

Strand: Direct

Name: 120609157

Synonym: Aave_0454

Alternate gene names: NA

Gene position: 491645-492187 (Clockwise)

Preceding gene: 120609148

Following gene: 120609158

Centisome position: 9.18

GC content: 74.59

Gene sequence:

>543_bases
GTGAGCACGATCAAAGGCCTGCGCACGCTGGTGCGCCTGAAGGCACGACGCACGGAGCAGGCCGAAGCGGCCCTGCAGGA
AAGCATCCAGGCACTGAAGGGCGAAGAAGAGGCGCTTGCGCAGGCGCAGGCCGAGGAGTCGCATGCGCGCGATGCGGAGC
GTGCGCGCCGCGAGCGGCTGGCGTCGGCCACGTCGGCGGGCAGCTGCTTCCTGGCCAACGATGCGATCACCCTGCAGATG
CTGGTGTCCGAAGCGCAGGGCCAGAGCACGGAGGCCGAGCGCCATACGGCGCAGGCCCGGGACCGCGTGGATGCGGCCCG
CGAACAGGTGCGGCTGCGCGACGCGGCCGTGCGCCGTGCGCAGCGGCAGCTGGAGGCCACGCGCGAGCGCCTGGAGCAGG
CCCTCGCGGCCGCCGAGCGCGCGCAGGAAGACGCGCAGGACGAGGAGGCCGAGGAAACCGCGGTGGCCCGCATGCTGGCC
GCCGCGCGGCAGGGGCGGCGCACCGGCGCGCGATCCGGGGCATCGAGGGCGGTGGAGGCCTGA

Upstream 100 bases:

>100_bases
GCATTCCGGTGGACGGCTTCGGGCCGGCCGGCGCCGGGCGGGTCGGCATGCCCCAGGCTGCTGGCCAGCAGGCCGGGGTG
GATCGGCCGATGGAGAACTC

Downstream 100 bases:

>100_bases
CGCGATGGAAGAGTATTTGCAGAATGGATATGCGCTGGTCCGGCTGGGCGGGGACCTGCACGGCATGTTGGGGTTGCTGG
CGCTCTGCTGCGCGCGCTTC

Product: type III secretion protein HrpB7

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSTIKGLRTLVRLKARRTEQAEAALQESIQALKGEEEALAQAQAEESHARDAERARRERLASATSAGSCFLANDAITLQM
LVSEAQGQSTEAERHTAQARDRVDAAREQVRLRDAAVRRAQRQLEATRERLEQALAAAERAQEDAQDEEAEETAVARMLA
AARQGRRTGARSGASRAVEA

Sequences:

>Translated_180_residues
MSTIKGLRTLVRLKARRTEQAEAALQESIQALKGEEEALAQAQAEESHARDAERARRERLASATSAGSCFLANDAITLQM
LVSEAQGQSTEAERHTAQARDRVDAAREQVRLRDAAVRRAQRQLEATRERLEQALAAAERAQEDAQDEEAEETAVARMLA
AARQGRRTGARSGASRAVEA
>Mature_179_residues
STIKGLRTLVRLKARRTEQAEAALQESIQALKGEEEALAQAQAEESHARDAERARRERLASATSAGSCFLANDAITLQML
VSEAQGQSTEAERHTAQARDRVDAAREQVRLRDAAVRRAQRQLEATRERLEQALAAAERAQEDAQDEEAEETAVARMLAA
ARQGRRTGARSGASRAVEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19675; Mature: 19544

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIKGLRTLVRLKARRTEQAEAALQESIQALKGEEEALAQAQAEESHARDAERARRERL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASATSAGSCFLANDAITLQMLVSEAQGQSTEAERHTAQARDRVDAAREQVRLRDAAVRRA
HHHHCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQLEATRERLEQALAAAERAQEDAQDEEAEETAVARMLAAARQGRRTGARSGASRAVEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure 
STIKGLRTLVRLKARRTEQAEAALQESIQALKGEEEALAQAQAEESHARDAERARRERL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASATSAGSCFLANDAITLQMLVSEAQGQSTEAERHTAQARDRVDAAREQVRLRDAAVRRA
HHHHCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQLEATRERLEQALAAAERAQEDAQDEEAEETAVARMLAAARQGRRTGARSGASRAVEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA