Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120609103
Identifier: 120609103
GI number: 120609103
Start: 430445
End: 431152
Strand: Direct
Name: 120609103
Synonym: Aave_0400
Alternate gene names: NA
Gene position: 430445-431152 (Clockwise)
Preceding gene: 120609102
Following gene: 120609112
Centisome position: 8.04
GC content: 50.28
Gene sequence:
>708_bases GTGGTCGCTCTACTTCACGGCATCCGTACCGCCGCAGGATGGCAAGAAAAGGCTCGTGCCGCCCTGGATGTGCCTGGTGC AATCAAGGTCGTGCCCATCGGATATCGATATAAAGATGTTATAAGATTTCTTGGCCCTTGTCGCGGTCATGCGGTAGATC GAGTTACTCGCGAACTTCGCGACTTGCAGAGGCTGAATCCAGGTTGTGAACTGGTCGTAATGGCCCACAGCTTTGGTACC TACGTCATATCAAAGATTCTCAAAGACGCCCCTGATATCCGAATTCAAAGACTATTGCTTTGTGGGTCAATTATTCCTGC AGCCTTTCGGTGGGATCAGTTGCCACACGAATTTACGGATAAAACATGTGTCAACGAAGTGGGGACGCGGGATATTTGGC CTGTTTTCGCGCGTGTGGCAACATGGGGGTACGGGGAAAGCGGGTCTTTTGGATTTAAAACGGCCCGTGTCACGGATCGT TTTTTTGATTACGGGCATAGCGACTTTTTTACAGACGAGCATTTTGAGAATTTCTGGAGGCCTTTCATAGCGCACGGGCT GGTAATTCCGTCGCCATGGGACTCAAAACGTCCAACTCCTTCATGGCTTGTGTCGGTACTTGGCGGATTGCCAATGATTA AAGGCGTGCTTTTATTCCTCGCCGTCGGAGTATTGCTTTTCGCCTTTTGGCTGCTCGGCTTCTATTGA
Upstream 100 bases:
>100_bases AGTGCTCGGCGGGCTGCATTTCCTGGTCTTTGCCGTGCTCATGTTGCCTGCAGCCGCACGGGTGCTGGCTGCGGCGGGAA GTTCATAACACGCTCTAACT
Downstream 100 bases:
>100_bases TTTTATCTCTCATATAACTGTTATTCAGATTCACCCTGTGCAGCTTGCAAGGCAGCGAGATTGACGGATGAGCCTTACCC CAGCCGCTTTGCCAAGTCCT
Product: ymc-like protein
Products: NA
Alternate protein names: Ymc-Like Protein
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MVALLHGIRTAAGWQEKARAALDVPGAIKVVPIGYRYKDVIRFLGPCRGHAVDRVTRELRDLQRLNPGCELVVMAHSFGT YVISKILKDAPDIRIQRLLLCGSIIPAAFRWDQLPHEFTDKTCVNEVGTRDIWPVFARVATWGYGESGSFGFKTARVTDR FFDYGHSDFFTDEHFENFWRPFIAHGLVIPSPWDSKRPTPSWLVSVLGGLPMIKGVLLFLAVGVLLFAFWLLGFY
Sequences:
>Translated_235_residues MVALLHGIRTAAGWQEKARAALDVPGAIKVVPIGYRYKDVIRFLGPCRGHAVDRVTRELRDLQRLNPGCELVVMAHSFGT YVISKILKDAPDIRIQRLLLCGSIIPAAFRWDQLPHEFTDKTCVNEVGTRDIWPVFARVATWGYGESGSFGFKTARVTDR FFDYGHSDFFTDEHFENFWRPFIAHGLVIPSPWDSKRPTPSWLVSVLGGLPMIKGVLLFLAVGVLLFAFWLLGFY >Mature_235_residues MVALLHGIRTAAGWQEKARAALDVPGAIKVVPIGYRYKDVIRFLGPCRGHAVDRVTRELRDLQRLNPGCELVVMAHSFGT YVISKILKDAPDIRIQRLLLCGSIIPAAFRWDQLPHEFTDKTCVNEVGTRDIWPVFARVATWGYGESGSFGFKTARVTDR FFDYGHSDFFTDEHFENFWRPFIAHGLVIPSPWDSKRPTPSWLVSVLGGLPMIKGVLLFLAVGVLLFAFWLLGFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26568; Mature: 26568
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVALLHGIRTAAGWQEKARAALDVPGAIKVVPIGYRYKDVIRFLGPCRGHAVDRVTRELR CHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHH DLQRLNPGCELVVMAHSFGTYVISKILKDAPDIRIQRLLLCGSIIPAAFRWDQLPHEFTD HHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KTCVNEVGTRDIWPVFARVATWGYGESGSFGFKTARVTDRFFDYGHSDFFTDEHFENFWR HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH PFIAHGLVIPSPWDSKRPTPSWLVSVLGGLPMIKGVLLFLAVGVLLFAFWLLGFY HHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVALLHGIRTAAGWQEKARAALDVPGAIKVVPIGYRYKDVIRFLGPCRGHAVDRVTRELR CHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHH DLQRLNPGCELVVMAHSFGTYVISKILKDAPDIRIQRLLLCGSIIPAAFRWDQLPHEFTD HHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KTCVNEVGTRDIWPVFARVATWGYGESGSFGFKTARVTDRFFDYGHSDFFTDEHFENFWR HHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH PFIAHGLVIPSPWDSKRPTPSWLVSVLGGLPMIKGVLLFLAVGVLLFAFWLLGFY HHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA