| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608920
Identifier: 120608920
GI number: 120608920
Start: 235564
End: 236331
Strand: Direct
Name: 120608920
Synonym: Aave_0213
Alternate gene names: NA
Gene position: 235564-236331 (Clockwise)
Preceding gene: 120608913
Following gene: 120608921
Centisome position: 4.4
GC content: 72.01
Gene sequence:
>768_bases ATGACGAAGGCCGATTCCCTCCTTTCCCGCCGCTGCCTGCTGGGGCAGGGCTGCGCGCTGGCCGGCGCCCTGCTGGCCGG TTGCGGAACGCCCGCCCATACCGAGCGCGGCGAGGTGCAGGCCGCCGACATCGAGCCCACCGAACTGGCGCAGTCCGACG TGAACCGCATGGCCACGCTGGGCATGCGCGCCAACCTGGACAGCCTCTACCGGCTGATGGACAAGCTCTACCGCCGCAAC CCGGCCGAGTGGCGCAAGGGCCAGGCACCGGGCCAGCTGCCGGGCCGCATCCTGGCCGCCCAGCGCGTGCGCGACGCTAT CGAGCAGCGCCAGCCCTGGGCGCCGCTGCAGGGGCGCCGCGACATCGCCGCGCTGGCCTACTCGCTCAGCCCCGGGTTCA CGGGCGACCGGGTGGCCGCGGTCATCCACGCCACGGCCGACATGATCGTCACCGCCCACGGCGGCAAGACCCGCTTCTTC CTGATCGACGGGCTGGATGCGCAGCACCTCTACAACGCCGCGCGCAACGTGGAAATCGCCGTCTGGCTCATCGCCCAGCG GCAGGGTCCCGACGGCCGGCCGCTGCTGCTGGCCGACGAGATCGGCCCGGACGTGCGCAACGTGAGCTTCGAGCGCGAGT TCGGCAAGATCATCGCGCGGCTCGACCTGCTGGCCGGCGTGGTGGCCGAGAAGTACCGCCGCGCCGCCATCAGCTACGTG CAGAACCTGGTGGGCGGCACCTTCCTGCAGTTCCTGCCCGTGCGCTAG
Upstream 100 bases:
>100_bases TGCATCTCTGCTCCGGCCTGCCGCGCTGCCTGCATTTGGTGCGCTGCAGCACCGCGCCCGGGATGGAGCGCACCCGGCGC CTGCCCATAATCCGCGTGTG
Downstream 100 bases:
>100_bases GCGAAGAGGCCTCCCCCGGCGGCGCACCGCCGTCCCCGTTTAAAATCCGCCCGCCCTCCGAGGAGCGTTGCAGCGGCCCG TCCGCCGGCGTCGGTCACGA
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTKADSLLSRRCLLGQGCALAGALLAGCGTPAHTERGEVQAADIEPTELAQSDVNRMATLGMRANLDSLYRLMDKLYRRN PAEWRKGQAPGQLPGRILAAQRVRDAIEQRQPWAPLQGRRDIAALAYSLSPGFTGDRVAAVIHATADMIVTAHGGKTRFF LIDGLDAQHLYNAARNVEIAVWLIAQRQGPDGRPLLLADEIGPDVRNVSFEREFGKIIARLDLLAGVVAEKYRRAAISYV QNLVGGTFLQFLPVR
Sequences:
>Translated_255_residues MTKADSLLSRRCLLGQGCALAGALLAGCGTPAHTERGEVQAADIEPTELAQSDVNRMATLGMRANLDSLYRLMDKLYRRN PAEWRKGQAPGQLPGRILAAQRVRDAIEQRQPWAPLQGRRDIAALAYSLSPGFTGDRVAAVIHATADMIVTAHGGKTRFF LIDGLDAQHLYNAARNVEIAVWLIAQRQGPDGRPLLLADEIGPDVRNVSFEREFGKIIARLDLLAGVVAEKYRRAAISYV QNLVGGTFLQFLPVR >Mature_254_residues TKADSLLSRRCLLGQGCALAGALLAGCGTPAHTERGEVQAADIEPTELAQSDVNRMATLGMRANLDSLYRLMDKLYRRNP AEWRKGQAPGQLPGRILAAQRVRDAIEQRQPWAPLQGRRDIAALAYSLSPGFTGDRVAAVIHATADMIVTAHGGKTRFFL IDGLDAQHLYNAARNVEIAVWLIAQRQGPDGRPLLLADEIGPDVRNVSFEREFGKIIARLDLLAGVVAEKYRRAAISYVQ NLVGGTFLQFLPVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27879; Mature: 27748
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKADSLLSRRCLLGQGCALAGALLAGCGTPAHTERGEVQAADIEPTELAQSDVNRMATL CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHH GMRANLDSLYRLMDKLYRRNPAEWRKGQAPGQLPGRILAAQRVRDAIEQRQPWAPLQGRR CCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH DIAALAYSLSPGFTGDRVAAVIHATADMIVTAHGGKTRFFLIDGLDAQHLYNAARNVEIA HHHHHHHHCCCCCCCHHHHHHHHHHHCEEEEECCCCEEEEEEECCCHHHHHHHHCCCEEE VWLIAQRQGPDGRPLLLADEIGPDVRNVSFEREFGKIIARLDLLAGVVAEKYRRAAISYV EEEEEECCCCCCCEEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNLVGGTFLQFLPVR HHHHHHHHHHHCCCC >Mature Secondary Structure TKADSLLSRRCLLGQGCALAGALLAGCGTPAHTERGEVQAADIEPTELAQSDVNRMATL CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHH GMRANLDSLYRLMDKLYRRNPAEWRKGQAPGQLPGRILAAQRVRDAIEQRQPWAPLQGRR CCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCH DIAALAYSLSPGFTGDRVAAVIHATADMIVTAHGGKTRFFLIDGLDAQHLYNAARNVEIA HHHHHHHHCCCCCCCHHHHHHHHHHHCEEEEECCCCEEEEEEECCCHHHHHHHHCCCEEE VWLIAQRQGPDGRPLLLADEIGPDVRNVSFEREFGKIIARLDLLAGVVAEKYRRAAISYV EEEEEECCCCCCCEEEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNLVGGTFLQFLPVR HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA