Click here to switch to the map view.

The map label for this gene is 120608904

Identifier: 120608904

GI number: 120608904

Start: 221428

End: 221892

Strand: Direct

Name: 120608904

Synonym: Aave_0196

Alternate gene names: NA

Gene position: 221428-221892 (Clockwise)

Preceding gene: 120608895

Following gene: 120608907

Centisome position: 4.14

GC content: 68.82

Gene sequence:

>465_bases
ATGCTGTCCACTTCCGCCCCTTCCGTTGCCCGTTCCTCCGGCCTGCAGGGCCCCCTGCGCCGCGTGGTCTATGTCACGCT
CTACGAACTCATCGCCATCGCGTTCGCCACGTTCGGGATGATGTGGGCCACCGGCCAGGGCGCGGGCCATTCGGGCGCCG
TGGCCGCGATCGCCTCGGGCATCGCCATCGTGTGGAACGTGGCGTTCAACTGGGCGTTCGAGCGCTGGGAATCTCGCCAG
GCAGTGCGCGGGCGCAGCATGGCGCGGCGCGTGGCGCACGCCATCGGCTTCGAGGGCGGCCTGGCGATGGTCCTCGTGCC
CGTGCTGGCCTGGTGGTTCGGCATCGGGCTGTGGGAAGCCTTCGTGATGGACATGGGCCTGCTGCTGTTCTTCCTGGGCT
ACACCTTCGTCTTCAACTGGGTGTTCGACCGCGTGTTCGGCCTGCCGGCCTCGGCGCGCCACTGA

Upstream 100 bases:

>100_bases
CATTCACGCTGTCGGAAGAAAACGCCATGGCTCCGATGTATCAGAAAAACTGAAAGAAGCTGACTTTATATATCAGCCTC
TGGAACATAAAGTGGCCCGC

Downstream 100 bases:

>100_bases
GCGGCTGCGTCTCGCGCCCGGGTTCGGGTTCGGGGTGGCCTGCGGCGGCGGCATGCCACCACCGCAGGCAGCCAGCGCCG
CCGCGGCTTTGCGAAGTCTG

Product: transmembrane pair domain-containing protein

Products: NA

Alternate protein names: Transmembrane Pair Domain Protein; Transmembrane Pair; Transmembrane Pair Permease Of Facilitator Superfamily; Transmembrane Pair Family Protein; Bacterial Transmembrane Pair Family; Outer Membrane Protein; Transmembrane Pair Protein; Transmembrane Protein; Bacterial Transmembrane Pair Family Protein

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MLSTSAPSVARSSGLQGPLRRVVYVTLYELIAIAFATFGMMWATGQGAGHSGAVAAIASGIAIVWNVAFNWAFERWESRQ
AVRGRSMARRVAHAIGFEGGLAMVLVPVLAWWFGIGLWEAFVMDMGLLLFFLGYTFVFNWVFDRVFGLPASARH

Sequences:

>Translated_154_residues
MLSTSAPSVARSSGLQGPLRRVVYVTLYELIAIAFATFGMMWATGQGAGHSGAVAAIASGIAIVWNVAFNWAFERWESRQ
AVRGRSMARRVAHAIGFEGGLAMVLVPVLAWWFGIGLWEAFVMDMGLLLFFLGYTFVFNWVFDRVFGLPASARH
>Mature_154_residues
MLSTSAPSVARSSGLQGPLRRVVYVTLYELIAIAFATFGMMWATGQGAGHSGAVAAIASGIAIVWNVAFNWAFERWESRQ
AVRGRSMARRVAHAIGFEGGLAMVLVPVLAWWFGIGLWEAFVMDMGLLLFFLGYTFVFNWVFDRVFGLPASARH

Specific function: Unknown

COG id: COG4125

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16893; Mature: 16893

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSTSAPSVARSSGLQGPLRRVVYVTLYELIAIAFATFGMMWATGQGAGHSGAVAAIASG
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
IAIVWNVAFNWAFERWESRQAVRGRSMARRVAHAIGFEGGLAMVLVPVLAWWFGIGLWEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FVMDMGLLLFFLGYTFVFNWVFDRVFGLPASARH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLSTSAPSVARSSGLQGPLRRVVYVTLYELIAIAFATFGMMWATGQGAGHSGAVAAIASG
CCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
IAIVWNVAFNWAFERWESRQAVRGRSMARRVAHAIGFEGGLAMVLVPVLAWWFGIGLWEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
FVMDMGLLLFFLGYTFVFNWVFDRVFGLPASARH
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA