| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608895
Identifier: 120608895
GI number: 120608895
Start: 210639
End: 211745
Strand: Direct
Name: 120608895
Synonym: Aave_0187
Alternate gene names: NA
Gene position: 210639-211745 (Clockwise)
Preceding gene: 120608894
Following gene: 120608904
Centisome position: 3.94
GC content: 80.04
Gene sequence:
>1107_bases ATGCCCTCTTCATCCATCGATCCCCTGCTCCCGCCGCAGGGCGCCCTGGCGCGCCTGTTCGCGGAAGCCGCGCTGCAGCG GCAGGGCATGCTGCTCGGCACCGACCGTGGCGGCGATACCGCCCCCTCGACCCCGGCCCCGCCACACGCGCCCGGGGCTG CCGCGCCGCCCCGACCCCTGCCGTCCACCGAACGCGTGAGCGTGTCGCCCGAGGCCCGCGCACGCGCGGATGCGGCGCTG GGCCCCGGCCCGGCCGCCGCCCCACGCCCCGGCGCTGCGGTGCCCGGCACCACAGGCCATGGCTCGCCGGGGGCGGGCCG CCCTCCGGCCGGGCTGCCCGGTCTGGCCATGCCTGCGCCGGCCGCCGGCACGGCCCCGGTGGACGGCGCGAGGGAGGCAT GGCCCGCCCGCGGGGTCGGCAGCCCCATGCGCTCCCTGCTCGGCATGCTGGTGCACCGCATGGCGGAAGCCGGCGGTCCG GCCCTGCGCGTGGTGGCGGCCCAGCCCTGGACGGCGGACATGGCGCGGGCCTTGCGGGCCGCCATGTCGGCCCATGGCGG TCCGGCCGCACTGCAGACCTGGCGCGTGGGGCAGGGCCGCGTGCAGGCGGAAGGCGGCGAGCGGGGATTCGCCTTCACGC TCCAGGTGCCGTCGGCCTGGGCGGCGCGCGGCGCGGCCGCCGGGGCGGACGCGGGCCTGGCGGGTGCCGCGGCCTCCGCG GGCGCACAGGCCCTGGCCGTACCGTTCCCCGGGCGGCAGGTCCGGCTGGAATCTGGCGTGTTCGCGCTGGTGCTGCACCC GGCCCGGGACGGCCCGGGCACGCCGGGCAGGACGAGCGCGCTCCTGTCCCTGGAGTTCCAGCCGCCGCCCCAGCAGGGCC TGTACGGGCGCGAGTGGATGCAGCCCGCCCTGCGCGCCGATCCCTGGCTGCAGATGGCGGCGCTGGAGGCCAGCGGCTGG CGCCGCGAGGACGAGGAGGCCGAGGCCGCCGCGCACCGGGGCGCGGTGCCGCCCTGCGACCAGCCGGGCTGCCCCTACGA GGGTCGTGCGCCCTGCGAGCAGCCCTTCTGCCTGGCGCTGCGCGTGGAGCCCCGCCGCCCGGCCTGA
Upstream 100 bases:
>100_bases GCGCGTTGCCGCTGGCATGCGCCGGCAGGCATGGCGCTCGCGGCCGCCAGGCCGCACAATCCGGTCAGGCTGCCGTGCGC GGCCGGCCTCCGGAAACGCC
Downstream 100 bases:
>100_bases CCGGGCCGCGCTCCGGCAGGCGGCACGCCCCCGCAACGCGGCACATCGCCGTGCCATGGAAAAAAGCCGCCAGGCCGGGT AAGGCGCTGGCGGCTTCTTT
Product: putative Fe-S oxidoreductase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MPSSSIDPLLPPQGALARLFAEAALQRQGMLLGTDRGGDTAPSTPAPPHAPGAAAPPRPLPSTERVSVSPEARARADAAL GPGPAAAPRPGAAVPGTTGHGSPGAGRPPAGLPGLAMPAPAAGTAPVDGAREAWPARGVGSPMRSLLGMLVHRMAEAGGP ALRVVAAQPWTADMARALRAAMSAHGGPAALQTWRVGQGRVQAEGGERGFAFTLQVPSAWAARGAAAGADAGLAGAAASA GAQALAVPFPGRQVRLESGVFALVLHPARDGPGTPGRTSALLSLEFQPPPQQGLYGREWMQPALRADPWLQMAALEASGW RREDEEAEAAAHRGAVPPCDQPGCPYEGRAPCEQPFCLALRVEPRRPA
Sequences:
>Translated_368_residues MPSSSIDPLLPPQGALARLFAEAALQRQGMLLGTDRGGDTAPSTPAPPHAPGAAAPPRPLPSTERVSVSPEARARADAAL GPGPAAAPRPGAAVPGTTGHGSPGAGRPPAGLPGLAMPAPAAGTAPVDGAREAWPARGVGSPMRSLLGMLVHRMAEAGGP ALRVVAAQPWTADMARALRAAMSAHGGPAALQTWRVGQGRVQAEGGERGFAFTLQVPSAWAARGAAAGADAGLAGAAASA GAQALAVPFPGRQVRLESGVFALVLHPARDGPGTPGRTSALLSLEFQPPPQQGLYGREWMQPALRADPWLQMAALEASGW RREDEEAEAAAHRGAVPPCDQPGCPYEGRAPCEQPFCLALRVEPRRPA >Mature_367_residues PSSSIDPLLPPQGALARLFAEAALQRQGMLLGTDRGGDTAPSTPAPPHAPGAAAPPRPLPSTERVSVSPEARARADAALG PGPAAAPRPGAAVPGTTGHGSPGAGRPPAGLPGLAMPAPAAGTAPVDGAREAWPARGVGSPMRSLLGMLVHRMAEAGGPA LRVVAAQPWTADMARALRAAMSAHGGPAALQTWRVGQGRVQAEGGERGFAFTLQVPSAWAARGAAAGADAGLAGAAASAG AQALAVPFPGRQVRLESGVFALVLHPARDGPGTPGRTSALLSLEFQPPPQQGLYGREWMQPALRADPWLQMAALEASGWR REDEEAEAAAHRGAVPPCDQPGCPYEGRAPCEQPFCLALRVEPRRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37286; Mature: 37154
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSSIDPLLPPQGALARLFAEAALQRQGMLLGTDRGGDTAPSTPAPPHAPGAAAPPRPL CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC PSTERVSVSPEARARADAALGPGPAAAPRPGAAVPGTTGHGSPGAGRPPAGLPGLAMPAP CCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAGTAPVDGAREAWPARGVGSPMRSLLGMLVHRMAEAGGPALRVVAAQPWTADMARALRA CCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH AMSAHGGPAALQTWRVGQGRVQAEGGERGFAFTLQVPSAWAARGAAAGADAGLAGAAASA HHHCCCCCHHHEEEECCCCEEEECCCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHC GAQALAVPFPGRQVRLESGVFALVLHPARDGPGTPGRTSALLSLEFQPPPQQGLYGREWM CCCEEEECCCCCEEEECCCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHH QPALRADPWLQMAALEASGWRREDEEAEAAAHRGAVPPCDQPGCPYEGRAPCEQPFCLAL HHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE RVEPRRPA EECCCCCC >Mature Secondary Structure PSSSIDPLLPPQGALARLFAEAALQRQGMLLGTDRGGDTAPSTPAPPHAPGAAAPPRPL CCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC PSTERVSVSPEARARADAALGPGPAAAPRPGAAVPGTTGHGSPGAGRPPAGLPGLAMPAP CCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAGTAPVDGAREAWPARGVGSPMRSLLGMLVHRMAEAGGPALRVVAAQPWTADMARALRA CCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH AMSAHGGPAALQTWRVGQGRVQAEGGERGFAFTLQVPSAWAARGAAAGADAGLAGAAASA HHHCCCCCHHHEEEECCCCEEEECCCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHC GAQALAVPFPGRQVRLESGVFALVLHPARDGPGTPGRTSALLSLEFQPPPQQGLYGREWM CCCEEEECCCCCEEEECCCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHH QPALRADPWLQMAALEASGWRREDEEAEAAAHRGAVPPCDQPGCPYEGRAPCEQPFCLAL HHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE RVEPRRPA EECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA