Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120608895

Identifier: 120608895

GI number: 120608895

Start: 210639

End: 211745

Strand: Direct

Name: 120608895

Synonym: Aave_0187

Alternate gene names: NA

Gene position: 210639-211745 (Clockwise)

Preceding gene: 120608894

Following gene: 120608904

Centisome position: 3.94

GC content: 80.04

Gene sequence:

>1107_bases
ATGCCCTCTTCATCCATCGATCCCCTGCTCCCGCCGCAGGGCGCCCTGGCGCGCCTGTTCGCGGAAGCCGCGCTGCAGCG
GCAGGGCATGCTGCTCGGCACCGACCGTGGCGGCGATACCGCCCCCTCGACCCCGGCCCCGCCACACGCGCCCGGGGCTG
CCGCGCCGCCCCGACCCCTGCCGTCCACCGAACGCGTGAGCGTGTCGCCCGAGGCCCGCGCACGCGCGGATGCGGCGCTG
GGCCCCGGCCCGGCCGCCGCCCCACGCCCCGGCGCTGCGGTGCCCGGCACCACAGGCCATGGCTCGCCGGGGGCGGGCCG
CCCTCCGGCCGGGCTGCCCGGTCTGGCCATGCCTGCGCCGGCCGCCGGCACGGCCCCGGTGGACGGCGCGAGGGAGGCAT
GGCCCGCCCGCGGGGTCGGCAGCCCCATGCGCTCCCTGCTCGGCATGCTGGTGCACCGCATGGCGGAAGCCGGCGGTCCG
GCCCTGCGCGTGGTGGCGGCCCAGCCCTGGACGGCGGACATGGCGCGGGCCTTGCGGGCCGCCATGTCGGCCCATGGCGG
TCCGGCCGCACTGCAGACCTGGCGCGTGGGGCAGGGCCGCGTGCAGGCGGAAGGCGGCGAGCGGGGATTCGCCTTCACGC
TCCAGGTGCCGTCGGCCTGGGCGGCGCGCGGCGCGGCCGCCGGGGCGGACGCGGGCCTGGCGGGTGCCGCGGCCTCCGCG
GGCGCACAGGCCCTGGCCGTACCGTTCCCCGGGCGGCAGGTCCGGCTGGAATCTGGCGTGTTCGCGCTGGTGCTGCACCC
GGCCCGGGACGGCCCGGGCACGCCGGGCAGGACGAGCGCGCTCCTGTCCCTGGAGTTCCAGCCGCCGCCCCAGCAGGGCC
TGTACGGGCGCGAGTGGATGCAGCCCGCCCTGCGCGCCGATCCCTGGCTGCAGATGGCGGCGCTGGAGGCCAGCGGCTGG
CGCCGCGAGGACGAGGAGGCCGAGGCCGCCGCGCACCGGGGCGCGGTGCCGCCCTGCGACCAGCCGGGCTGCCCCTACGA
GGGTCGTGCGCCCTGCGAGCAGCCCTTCTGCCTGGCGCTGCGCGTGGAGCCCCGCCGCCCGGCCTGA

Upstream 100 bases:

>100_bases
GCGCGTTGCCGCTGGCATGCGCCGGCAGGCATGGCGCTCGCGGCCGCCAGGCCGCACAATCCGGTCAGGCTGCCGTGCGC
GGCCGGCCTCCGGAAACGCC

Downstream 100 bases:

>100_bases
CCGGGCCGCGCTCCGGCAGGCGGCACGCCCCCGCAACGCGGCACATCGCCGTGCCATGGAAAAAAGCCGCCAGGCCGGGT
AAGGCGCTGGCGGCTTCTTT

Product: putative Fe-S oxidoreductase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MPSSSIDPLLPPQGALARLFAEAALQRQGMLLGTDRGGDTAPSTPAPPHAPGAAAPPRPLPSTERVSVSPEARARADAAL
GPGPAAAPRPGAAVPGTTGHGSPGAGRPPAGLPGLAMPAPAAGTAPVDGAREAWPARGVGSPMRSLLGMLVHRMAEAGGP
ALRVVAAQPWTADMARALRAAMSAHGGPAALQTWRVGQGRVQAEGGERGFAFTLQVPSAWAARGAAAGADAGLAGAAASA
GAQALAVPFPGRQVRLESGVFALVLHPARDGPGTPGRTSALLSLEFQPPPQQGLYGREWMQPALRADPWLQMAALEASGW
RREDEEAEAAAHRGAVPPCDQPGCPYEGRAPCEQPFCLALRVEPRRPA

Sequences:

>Translated_368_residues
MPSSSIDPLLPPQGALARLFAEAALQRQGMLLGTDRGGDTAPSTPAPPHAPGAAAPPRPLPSTERVSVSPEARARADAAL
GPGPAAAPRPGAAVPGTTGHGSPGAGRPPAGLPGLAMPAPAAGTAPVDGAREAWPARGVGSPMRSLLGMLVHRMAEAGGP
ALRVVAAQPWTADMARALRAAMSAHGGPAALQTWRVGQGRVQAEGGERGFAFTLQVPSAWAARGAAAGADAGLAGAAASA
GAQALAVPFPGRQVRLESGVFALVLHPARDGPGTPGRTSALLSLEFQPPPQQGLYGREWMQPALRADPWLQMAALEASGW
RREDEEAEAAAHRGAVPPCDQPGCPYEGRAPCEQPFCLALRVEPRRPA
>Mature_367_residues
PSSSIDPLLPPQGALARLFAEAALQRQGMLLGTDRGGDTAPSTPAPPHAPGAAAPPRPLPSTERVSVSPEARARADAALG
PGPAAAPRPGAAVPGTTGHGSPGAGRPPAGLPGLAMPAPAAGTAPVDGAREAWPARGVGSPMRSLLGMLVHRMAEAGGPA
LRVVAAQPWTADMARALRAAMSAHGGPAALQTWRVGQGRVQAEGGERGFAFTLQVPSAWAARGAAAGADAGLAGAAASAG
AQALAVPFPGRQVRLESGVFALVLHPARDGPGTPGRTSALLSLEFQPPPQQGLYGREWMQPALRADPWLQMAALEASGWR
REDEEAEAAAHRGAVPPCDQPGCPYEGRAPCEQPFCLALRVEPRRPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37286; Mature: 37154

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSSIDPLLPPQGALARLFAEAALQRQGMLLGTDRGGDTAPSTPAPPHAPGAAAPPRPL
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PSTERVSVSPEARARADAALGPGPAAAPRPGAAVPGTTGHGSPGAGRPPAGLPGLAMPAP
CCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAGTAPVDGAREAWPARGVGSPMRSLLGMLVHRMAEAGGPALRVVAAQPWTADMARALRA
CCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH
AMSAHGGPAALQTWRVGQGRVQAEGGERGFAFTLQVPSAWAARGAAAGADAGLAGAAASA
HHHCCCCCHHHEEEECCCCEEEECCCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHC
GAQALAVPFPGRQVRLESGVFALVLHPARDGPGTPGRTSALLSLEFQPPPQQGLYGREWM
CCCEEEECCCCCEEEECCCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHH
QPALRADPWLQMAALEASGWRREDEEAEAAAHRGAVPPCDQPGCPYEGRAPCEQPFCLAL
HHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE
RVEPRRPA
EECCCCCC
>Mature Secondary Structure 
PSSSIDPLLPPQGALARLFAEAALQRQGMLLGTDRGGDTAPSTPAPPHAPGAAAPPRPL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PSTERVSVSPEARARADAALGPGPAAAPRPGAAVPGTTGHGSPGAGRPPAGLPGLAMPAP
CCCCEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAGTAPVDGAREAWPARGVGSPMRSLLGMLVHRMAEAGGPALRVVAAQPWTADMARALRA
CCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHH
AMSAHGGPAALQTWRVGQGRVQAEGGERGFAFTLQVPSAWAARGAAAGADAGLAGAAASA
HHHCCCCCHHHEEEECCCCEEEECCCCCCEEEEEECCCHHHHHCCCCCCCCCCHHHHHHC
GAQALAVPFPGRQVRLESGVFALVLHPARDGPGTPGRTSALLSLEFQPPPQQGLYGREWM
CCCEEEECCCCCEEEECCCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHH
QPALRADPWLQMAALEASGWRREDEEAEAAAHRGAVPPCDQPGCPYEGRAPCEQPFCLAL
HHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEE
RVEPRRPA
EECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA