| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is mod [H]
Identifier: 120608867
GI number: 120608867
Start: 175361
End: 177367
Strand: Direct
Name: mod [H]
Synonym: Aave_0159
Alternate gene names: 120608867
Gene position: 175361-177367 (Clockwise)
Preceding gene: 120608866
Following gene: 120608868
Centisome position: 3.28
GC content: 54.36
Gene sequence:
>2007_bases ATGACGAACTCGAATATGCAGAAAATCGTCGCCACGGCGCCCGAGACGCAGTCCGCCGACTTGGTGGCCGGCAACATCGC CCAGCTCAAGGCCTTGTTTCCCGAGCTTGTCACCGAAGGCTCCAAGGGCGTCGCCATCAACTTGGACGTCCTCAAGGCCC TGGTGGGCGACGCCAAGGTCACCGATGCTGAAGAGAAGTATGGTCTGAACTGGCACGGCAAGCGCCGGGCGCGCCAACTG GCCTTGACGCCCAGCACCGGCACGCTGCGTCCTTGCCCAGAAGAGAGCGTGGACTGGGACAGCACTCAGAACCTGATGAT CGAGGGTGACAACCTGGAAGTGCTGAAGCTGCTCCAGAAGAGCTATGCCGGCAAGGTCAAGCTCATCTACATCGACCCGC CGTACAACACGGGCAAGGATTTCGTGTACCCAGACAACTTCCAGAACGGTATTCAAAACTACTTGGAGTTGACCGGGCAG ACGGAGAGTGGTGTAAAGGTGTCCAGCAACACCGAGGCCAGCGGTCGCTTTCATACCGACTGGCTTAATATGATGTATCC CCGCTTGAAGCTGGCCAGGCAACTATTGAAAGAAGATGGGGCTATTTTTGTCTCTATTGACGACATAGAACTGCCCCGGC TTAAAATTGCGCTCGACGAGCTATTTGGTGAAGATAATCTTATTGCGCAATTTGTCTGGCGCTCCGACGGAAATTTCGAC AATCAGGCAAAGGTAAAGGTCTGTCATGAATATATTGTGGCATATGCCAAGTCTGCGCCGAACTTCGCGCACCCTCCTGT TGTCGATCCAAGCACGCCTACGGACAGCAAGATTTTTCGCCCACAGATTCGAAATACGATAGTGAAAAATGGGCCGAAAA ATCCTCCTTCGGAGATTTTATTGCCTGCTGGTTTTCCTGCCGATTTTGACGATGGGGTAATCGAAGGGCGAACAGAGGGT TGGCCGATTTATAAGGGCGCCGCAGTTATCAGAGGCGGTCGCCTTATAGCGCCAGCTTTAGTTGAAAGTGGCTGGAGCTC CAAGGATTTGCTGCTTGAATTTGTCGCCAATGGGTGCCTTCCCATCTTCGACGGCAAAGGCCAGTCAACCTCTTTTGTCA TATCCAGGACAGGAGCGATTGAGGTTATCAAAGAACGCACGGACACAAAAAGCCATGTCATATCTGTACTGACTGGCTTC GGCGGAACTCAAAAGGCTACCTCTCAGCTGGAAGAGCTAGGCGCTTTTTTCAATGGCTACCCAAAACCTCTTGAGTTGAT TCGCTACCTAACCAAGATGGTTCCAGGGAACGATGGAATCTTCTTGGATTTCTTCGCGGGTTCAGCGCCACTTGGACATG TAATCTATGAGCAAAATGCGGAAGATGAAGGTACGCGGCGATTTGTATTAGTTCAGTTGCCCGAGCAGCTCAGCCCAGAT TCAGATGTTCAAAAGGCCGCTGTCGCATACTGCGACAAATTGGGCAAGCCAAGGACGGTGGCCGAATTGACCAAAGAACG TTTGCGCCGCGCGGCAAAGAAGTTTTCAGCTAATAAGGGAGAGGCAACTGGGGACAACGGTTTTCGCGTCTTCAAGTTGG ACACTTCAAACGTGAAGGGGTGGACAACTCAAGTCCCCGACCTAAATCAAGCGCTACTGGAGCACCAAGAGCACCTGTTG CCGAACAGAACCGAGCAGGACCTGCTCTACGAACTCCTGCTCAAGCTCGGCCTCGACCTCTGCGTCCCCATCCAGCAGCA GATGATCGCCAGCAAGTCCGTCCACGCGGTGGGCGCCGGTGTGCTGCTGGCCTGCCTGGCCGAGGGCATAACCGCTGCCG AGGTGGAGACGCTGGCTGAAGGCATCGTACAGTGGCACCAGCAACTCGCGCCGGTCGGCGACACCACGTGCGTATTCCGC GATAGCGCTTTCGCGGACGATGTGGCGAAGACCAACATGGCAGCCATCTTGCAGCAGCATGGCATCCAGAATGTGCGGAG CCTCTAA
Upstream 100 bases:
>100_bases GCCAAGCGCGTCGATCAGAACCTGGCCTTGCAGCGGCTGCAGGCCGAGCTGGCTGCGGTGCGTGCCCGGCTTCAATGACA CAACAAGAACAGACACATTT
Downstream 100 bases:
>100_bases CCATGGCCGTGCCCGACCGCCCGAAGCTGTACCACATCTGCCATGTAGACCGGCTACCGTCCATCATTGCCAGTGGCGGC CTGCTGTCCGACGCAGCCGT
Product: adenine-specific DNA-methyltransferase
Products: NA
Alternate protein names: M.EcoP15I; EcoP15I methyltransferase [H]
Number of amino acids: Translated: 668; Mature: 667
Protein sequence:
>668_residues MTNSNMQKIVATAPETQSADLVAGNIAQLKALFPELVTEGSKGVAINLDVLKALVGDAKVTDAEEKYGLNWHGKRRARQL ALTPSTGTLRPCPEESVDWDSTQNLMIEGDNLEVLKLLQKSYAGKVKLIYIDPPYNTGKDFVYPDNFQNGIQNYLELTGQ TESGVKVSSNTEASGRFHTDWLNMMYPRLKLARQLLKEDGAIFVSIDDIELPRLKIALDELFGEDNLIAQFVWRSDGNFD NQAKVKVCHEYIVAYAKSAPNFAHPPVVDPSTPTDSKIFRPQIRNTIVKNGPKNPPSEILLPAGFPADFDDGVIEGRTEG WPIYKGAAVIRGGRLIAPALVESGWSSKDLLLEFVANGCLPIFDGKGQSTSFVISRTGAIEVIKERTDTKSHVISVLTGF GGTQKATSQLEELGAFFNGYPKPLELIRYLTKMVPGNDGIFLDFFAGSAPLGHVIYEQNAEDEGTRRFVLVQLPEQLSPD SDVQKAAVAYCDKLGKPRTVAELTKERLRRAAKKFSANKGEATGDNGFRVFKLDTSNVKGWTTQVPDLNQALLEHQEHLL PNRTEQDLLYELLLKLGLDLCVPIQQQMIASKSVHAVGAGVLLACLAEGITAAEVETLAEGIVQWHQQLAPVGDTTCVFR DSAFADDVAKTNMAAILQQHGIQNVRSL
Sequences:
>Translated_668_residues MTNSNMQKIVATAPETQSADLVAGNIAQLKALFPELVTEGSKGVAINLDVLKALVGDAKVTDAEEKYGLNWHGKRRARQL ALTPSTGTLRPCPEESVDWDSTQNLMIEGDNLEVLKLLQKSYAGKVKLIYIDPPYNTGKDFVYPDNFQNGIQNYLELTGQ TESGVKVSSNTEASGRFHTDWLNMMYPRLKLARQLLKEDGAIFVSIDDIELPRLKIALDELFGEDNLIAQFVWRSDGNFD NQAKVKVCHEYIVAYAKSAPNFAHPPVVDPSTPTDSKIFRPQIRNTIVKNGPKNPPSEILLPAGFPADFDDGVIEGRTEG WPIYKGAAVIRGGRLIAPALVESGWSSKDLLLEFVANGCLPIFDGKGQSTSFVISRTGAIEVIKERTDTKSHVISVLTGF GGTQKATSQLEELGAFFNGYPKPLELIRYLTKMVPGNDGIFLDFFAGSAPLGHVIYEQNAEDEGTRRFVLVQLPEQLSPD SDVQKAAVAYCDKLGKPRTVAELTKERLRRAAKKFSANKGEATGDNGFRVFKLDTSNVKGWTTQVPDLNQALLEHQEHLL PNRTEQDLLYELLLKLGLDLCVPIQQQMIASKSVHAVGAGVLLACLAEGITAAEVETLAEGIVQWHQQLAPVGDTTCVFR DSAFADDVAKTNMAAILQQHGIQNVRSL >Mature_667_residues TNSNMQKIVATAPETQSADLVAGNIAQLKALFPELVTEGSKGVAINLDVLKALVGDAKVTDAEEKYGLNWHGKRRARQLA LTPSTGTLRPCPEESVDWDSTQNLMIEGDNLEVLKLLQKSYAGKVKLIYIDPPYNTGKDFVYPDNFQNGIQNYLELTGQT ESGVKVSSNTEASGRFHTDWLNMMYPRLKLARQLLKEDGAIFVSIDDIELPRLKIALDELFGEDNLIAQFVWRSDGNFDN QAKVKVCHEYIVAYAKSAPNFAHPPVVDPSTPTDSKIFRPQIRNTIVKNGPKNPPSEILLPAGFPADFDDGVIEGRTEGW PIYKGAAVIRGGRLIAPALVESGWSSKDLLLEFVANGCLPIFDGKGQSTSFVISRTGAIEVIKERTDTKSHVISVLTGFG GTQKATSQLEELGAFFNGYPKPLELIRYLTKMVPGNDGIFLDFFAGSAPLGHVIYEQNAEDEGTRRFVLVQLPEQLSPDS DVQKAAVAYCDKLGKPRTVAELTKERLRRAAKKFSANKGEATGDNGFRVFKLDTSNVKGWTTQVPDLNQALLEHQEHLLP NRTEQDLLYELLLKLGLDLCVPIQQQMIASKSVHAVGAGVLLACLAEGITAAEVETLAEGIVQWHQQLAPVGDTTCVFRD SAFADDVAKTNMAAILQQHGIQNVRSL
Specific function: Binds the system-specific DNA recognition site 5'- CAGCAC-3'. Necessary for both restriction and methylation (of one of the two A's) [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 73233; Mature: 73102
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSNMQKIVATAPETQSADLVAGNIAQLKALFPELVTEGSKGVAINLDVLKALVGDAKV CCCCCCHHHEEECCCCCCCCCHHCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCC TDAEEKYGLNWHGKRRARQLALTPSTGTLRPCPEESVDWDSTQNLMIEGDNLEVLKLLQK CCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHH SYAGKVKLIYIDPPYNTGKDFVYPDNFQNGIQNYLELTGQTESGVKVSSNTEASGRFHTD HHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEHH WLNMMYPRLKLARQLLKEDGAIFVSIDDIELPRLKIALDELFGEDNLIAQFVWRSDGNFD HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCC NQAKVKVCHEYIVAYAKSAPNFAHPPVVDPSTPTDSKIFRPQIRNTIVKNGPKNPPSEIL CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHCCCCCCCCCEE LPAGFPADFDDGVIEGRTEGWPIYKGAAVIRGGRLIAPALVESGWSSKDLLLEFVANGCL ECCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCEEHHHHHHCCCCCHHHHHHHHHCCCE PIFDGKGQSTSFVISRTGAIEVIKERTDTKSHVISVLTGFGGTQKATSQLEELGAFFNGY EEECCCCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC PKPLELIRYLTKMVPGNDGIFLDFFAGSAPLGHVIYEQNAEDEGTRRFVLVQLPEQLSPD CCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHEECCCCCCCCCEEEEEEECCHHCCCC SDVQKAAVAYCDKLGKPRTVAELTKERLRRAAKKFSANKGEATGDNGFRVFKLDTSNVKG CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCC WTTQVPDLNQALLEHQEHLLPNRTEQDLLYELLLKLGLDLCVPIQQQMIASKSVHAVGAG CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHH VLLACLAEGITAAEVETLAEGIVQWHQQLAPVGDTTCVFRDSAFADDVAKTNMAAILQQH HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH GIQNVRSL CHHHHHCC >Mature Secondary Structure TNSNMQKIVATAPETQSADLVAGNIAQLKALFPELVTEGSKGVAINLDVLKALVGDAKV CCCCCHHHEEECCCCCCCCCHHCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCCC TDAEEKYGLNWHGKRRARQLALTPSTGTLRPCPEESVDWDSTQNLMIEGDNLEVLKLLQK CCCHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHH SYAGKVKLIYIDPPYNTGKDFVYPDNFQNGIQNYLELTGQTESGVKVSSNTEASGRFHTD HHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEHH WLNMMYPRLKLARQLLKEDGAIFVSIDDIELPRLKIALDELFGEDNLIAQFVWRSDGNFD HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCC NQAKVKVCHEYIVAYAKSAPNFAHPPVVDPSTPTDSKIFRPQIRNTIVKNGPKNPPSEIL CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCHHHHHHHHHCCCCCCCCCEE LPAGFPADFDDGVIEGRTEGWPIYKGAAVIRGGRLIAPALVESGWSSKDLLLEFVANGCL ECCCCCCCCCCCCCCCCCCCCCEECCCEEEECCCEEHHHHHHCCCCCHHHHHHHHHCCCE PIFDGKGQSTSFVISRTGAIEVIKERTDTKSHVISVLTGFGGTQKATSQLEELGAFFNGY EEECCCCCCCEEEEECCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC PKPLELIRYLTKMVPGNDGIFLDFFAGSAPLGHVIYEQNAEDEGTRRFVLVQLPEQLSPD CCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHEECCCCCCCCCEEEEEEECCHHCCCC SDVQKAAVAYCDKLGKPRTVAELTKERLRRAAKKFSANKGEATGDNGFRVFKLDTSNVKG CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCC WTTQVPDLNQALLEHQEHLLPNRTEQDLLYELLLKLGLDLCVPIQQQMIASKSVHAVGAG CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHH VLLACLAEGITAAEVETLAEGIVQWHQQLAPVGDTTCVFRDSAFADDVAKTNMAAILQQH HHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH GIQNVRSL CHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2837577 [H]