| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608866
Identifier: 120608866
GI number: 120608866
Start: 174559
End: 175338
Strand: Direct
Name: 120608866
Synonym: Aave_0158
Alternate gene names: NA
Gene position: 174559-175338 (Clockwise)
Preceding gene: 120608865
Following gene: 120608867
Centisome position: 3.26
GC content: 67.05
Gene sequence:
>780_bases GTGAGCGACGCCGTGAACGCTCTGCACGATGCCATCGTGGCTTCTCTGGCCCTGCCGGCGAGTTGCCGCGTGGACCAGCG CGTGCCCAAGAAGATGCTGGCGGAGCACGGCGGTGCTACTGCGGCCGACCGCCGGCTGTTGACGGACGGCATCGAAGAGG CCCACTGGCTAGCCGCCATCAAGCCTGCGACGACGGCCATTCCGACGTGGCGGGACGAGGTGCGGGAGTATCTGGAGCTC GCCGTGCTGAGCATGGCGGCGCGCCCCACCTACGCCCAACCGGCTCAGTTGCAGCGCCTGGCCGAGCTCGTGCATCGGGC CGTGCCCTACCTGGTGCTCCTGATCGTCAGCACACCGGATGCGGTGGCCATGAGCCTCTCGCACAAGCGCACGGCGCAGA ACGAGGCTGGACGAGTGGTCTTGGACGGCGATGTCGTGAGTTTCCAGTTCAGCGACGAATTGCCGGACGGGCTGCTGGAT GCCCTGGCGCTTGGGCAGCAGCCCCAGCAAGACCTGAAGGCTCTCTACCAAGGCTGGATGGACACCCTGTTGGCCGCCCA GGTGGCACGGGTGACAGGGCACTTCAGTATGGACCCCACAACCGACCAGGCCGCCATGCGGCGGATCGCCTTGATCGAAC ACCAGCAACTGGAGGCAGAGGCCGCCCGCTTGCGGGCCCTGGCTGGCAAAGAAAGCCAGATCGCCAAGCGCGTCGATCAG AACCTGGCCTTGCAGCGGCTGCAGGCCGAGCTGGCTGCGGTGCGTGCCCGGCTTCAATGA
Upstream 100 bases:
>100_bases CGCATGCCATGAAGGGCGAGTTCGCGGGGGCCAACGACTTCGAGGTGCTGGCTTTCATGGTCATCCTGCCCGGCAGCACC CAGCCTCAAGGGGGCGCCGC
Downstream 100 bases:
>100_bases CACAACAAGAACAGACACATTTATGACGAACTCGAATATGCAGAAAATCGTCGCCACGGCGCCCGAGACGCAGTCCGCCG ACTTGGTGGCCGGCAACATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSDAVNALHDAIVASLALPASCRVDQRVPKKMLAEHGGATAADRRLLTDGIEEAHWLAAIKPATTAIPTWRDEVREYLEL AVLSMAARPTYAQPAQLQRLAELVHRAVPYLVLLIVSTPDAVAMSLSHKRTAQNEAGRVVLDGDVVSFQFSDELPDGLLD ALALGQQPQQDLKALYQGWMDTLLAAQVARVTGHFSMDPTTDQAAMRRIALIEHQQLEAEAARLRALAGKESQIAKRVDQ NLALQRLQAELAAVRARLQ
Sequences:
>Translated_259_residues MSDAVNALHDAIVASLALPASCRVDQRVPKKMLAEHGGATAADRRLLTDGIEEAHWLAAIKPATTAIPTWRDEVREYLEL AVLSMAARPTYAQPAQLQRLAELVHRAVPYLVLLIVSTPDAVAMSLSHKRTAQNEAGRVVLDGDVVSFQFSDELPDGLLD ALALGQQPQQDLKALYQGWMDTLLAAQVARVTGHFSMDPTTDQAAMRRIALIEHQQLEAEAARLRALAGKESQIAKRVDQ NLALQRLQAELAAVRARLQ >Mature_258_residues SDAVNALHDAIVASLALPASCRVDQRVPKKMLAEHGGATAADRRLLTDGIEEAHWLAAIKPATTAIPTWRDEVREYLELA VLSMAARPTYAQPAQLQRLAELVHRAVPYLVLLIVSTPDAVAMSLSHKRTAQNEAGRVVLDGDVVSFQFSDELPDGLLDA LALGQQPQQDLKALYQGWMDTLLAAQVARVTGHFSMDPTTDQAAMRRIALIEHQQLEAEAARLRALAGKESQIAKRVDQN LALQRLQAELAAVRARLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28285; Mature: 28154
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAVNALHDAIVASLALPASCRVDQRVPKKMLAEHGGATAADRRLLTDGIEEAHWLAAI CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC KPATTAIPTWRDEVREYLELAVLSMAARPTYAQPAQLQRLAELVHRAVPYLVLLIVSTPD CCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH AVAMSLSHKRTAQNEAGRVVLDGDVVSFQFSDELPDGLLDALALGQQPQQDLKALYQGWM HHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHH DTLLAAQVARVTGHFSMDPTTDQAAMRRIALIEHQQLEAEAARLRALAGKESQIAKRVDQ HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH NLALQRLQAELAAVRARLQ HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDAVNALHDAIVASLALPASCRVDQRVPKKMLAEHGGATAADRRLLTDGIEEAHWLAAI CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC KPATTAIPTWRDEVREYLELAVLSMAARPTYAQPAQLQRLAELVHRAVPYLVLLIVSTPD CCCHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH AVAMSLSHKRTAQNEAGRVVLDGDVVSFQFSDELPDGLLDALALGQQPQQDLKALYQGWM HHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHH DTLLAAQVARVTGHFSMDPTTDQAAMRRIALIEHQQLEAEAARLRALAGKESQIAKRVDQ HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH NLALQRLQAELAAVRARLQ HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA