| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is tauC [H]
Identifier: 120608758
GI number: 120608758
Start: 53864
End: 54784
Strand: Direct
Name: tauC [H]
Synonym: Aave_0047
Alternate gene names: 120608758
Gene position: 53864-54784 (Clockwise)
Preceding gene: 120608757
Following gene: 120608762
Centisome position: 1.01
GC content: 71.44
Gene sequence:
>921_bases ATGTCCATGCCTGAGGAAGCGTTGATGCCGTCGCTCCCCGGCATGGCGGCGCAGCCCCGGCGCGAGGCTGCTGCGCCGGG TCCGACCCTGGCGCCTGCGGAGGCCGCCCCGTCGCCCGCCTTGCGGGCCGTTGCCCCGTACCGCCTGCCTGGCCAGGGGC CGAGCCGGGGCCTGAGCGTGGCCTGCGTCGCCGCATTCGCGCTGCTGTGGTGGCTGGCCACGCAGTTGCAGTGGGTCAAA CCGCTGTTCCTGCCCGCACCCCAGGCCGTGCTGCTGGCGCTGCGCGATGCCTGGGAAGGGCGCATCCAGGGCGGGGAACC CCTGTGGCGGCACCTGCAGTGGAGCGCGATCCGGGTCTTCGGCGCTTTCGTGCTCGCGGCCCTGACGGCGGTTCCCGTCG GCATCGCCATGGGGGTGAGCCGCGTGGCGCGCGGCGTGTTCGATCCACCCATCGAGTTCTACCGGCCGCTGCCGCCGCTG GCCTACCTGCCGCTCATCGTCATCTGGTTCGGCATCGACGAGACGGCCAAGATCCTGCTGATCTACCTCGCCTGCTTCGC GCCCATCGCGCTGGCAGCGCGGGCCGGAGTGCGCAGCGCGAGCGTGGAGCAGGTCCATGCCGCGCTGTCGCTGGGCGCGA GCCGCTGGCAGCTGGTGCGGCACGTGATCGTGCCGGCGGCACTGCCCGAGATCCTGGTGGGGCTGCGCATCGCCATCGGT TTCGGCTGGACGACGCTGGTAGCCGCGGAAATGGTGGCGGCAACGGTGGGCATCGGTCAGATGGTGCTCAATGCCTCGAA CTTCCTGCGCACCGACCTCGTGGTGGCCGGCATCCTGGTGATCGGCCTGGTGGCCTGGACATTCGATCTGGTCATGCGCT GGGTGGAGGCCCGCGCAGTGCCCTGGAAGGGACGGGCCTGA
Upstream 100 bases:
>100_bases TCCAGCTCGGCTTTCATCGACGGGCGTGAGCGTGTTCTGGACGAGGTGGCGCCATCGCTGGCCCCGCAGGCAGCGGCCCG GCAACCGGAGCACGTGGAGC
Downstream 100 bases:
>100_bases ACGCGGGCCCGTCCTGTTCCTGCAAGCCTGGGAAGGCTTACTTCTGCAGGCCCTCTGCCTTGAGGGCGGCCTGCACGGCC GGGCGGGAGCCCACGCGTGC
Product: binding-protein-dependent transport systems inner membrane component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSMPEEALMPSLPGMAAQPRREAAAPGPTLAPAEAAPSPALRAVAPYRLPGQGPSRGLSVACVAAFALLWWLATQLQWVK PLFLPAPQAVLLALRDAWEGRIQGGEPLWRHLQWSAIRVFGAFVLAALTAVPVGIAMGVSRVARGVFDPPIEFYRPLPPL AYLPLIVIWFGIDETAKILLIYLACFAPIALAARAGVRSASVEQVHAALSLGASRWQLVRHVIVPAALPEILVGLRIAIG FGWTTLVAAEMVAATVGIGQMVLNASNFLRTDLVVAGILVIGLVAWTFDLVMRWVEARAVPWKGRA
Sequences:
>Translated_306_residues MSMPEEALMPSLPGMAAQPRREAAAPGPTLAPAEAAPSPALRAVAPYRLPGQGPSRGLSVACVAAFALLWWLATQLQWVK PLFLPAPQAVLLALRDAWEGRIQGGEPLWRHLQWSAIRVFGAFVLAALTAVPVGIAMGVSRVARGVFDPPIEFYRPLPPL AYLPLIVIWFGIDETAKILLIYLACFAPIALAARAGVRSASVEQVHAALSLGASRWQLVRHVIVPAALPEILVGLRIAIG FGWTTLVAAEMVAATVGIGQMVLNASNFLRTDLVVAGILVIGLVAWTFDLVMRWVEARAVPWKGRA >Mature_305_residues SMPEEALMPSLPGMAAQPRREAAAPGPTLAPAEAAPSPALRAVAPYRLPGQGPSRGLSVACVAAFALLWWLATQLQWVKP LFLPAPQAVLLALRDAWEGRIQGGEPLWRHLQWSAIRVFGAFVLAALTAVPVGIAMGVSRVARGVFDPPIEFYRPLPPLA YLPLIVIWFGIDETAKILLIYLACFAPIALAARAGVRSASVEQVHAALSLGASRWQLVRHVIVPAALPEILVGLRIAIGF GWTTLVAAEMVAATVGIGQMVLNASNFLRTDLVVAGILVIGLVAWTFDLVMRWVEARAVPWKGRA
Specific function: Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=248, Percent_Identity=53.2258064516129, Blast_Score=226, Evalue=1e-60, Organism=Escherichia coli, GI87081802, Length=235, Percent_Identity=36.5957446808511, Blast_Score=134, Evalue=8e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 32741; Mature: 32610
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPEEALMPSLPGMAAQPRREAAAPGPTLAPAEAAPSPALRAVAPYRLPGQGPSRGLSV CCCCHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHH ACVAAFALLWWLATQLQWVKPLFLPAPQAVLLALRDAWEGRIQGGEPLWRHLQWSAIRVF HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH GAFVLAALTAVPVGIAMGVSRVARGVFDPPIEFYRPLPPLAYLPLIVIWFGIDETAKILL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHCCCHHHHHHH IYLACFAPIALAARAGVRSASVEQVHAALSLGASRWQLVRHVIVPAALPEILVGLRIAIG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGWTTLVAAEMVAATVGIGQMVLNASNFLRTDLVVAGILVIGLVAWTFDLVMRWVEARAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PWKGRA CCCCCC >Mature Secondary Structure SMPEEALMPSLPGMAAQPRREAAAPGPTLAPAEAAPSPALRAVAPYRLPGQGPSRGLSV CCCHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHH ACVAAFALLWWLATQLQWVKPLFLPAPQAVLLALRDAWEGRIQGGEPLWRHLQWSAIRVF HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH GAFVLAALTAVPVGIAMGVSRVARGVFDPPIEFYRPLPPLAYLPLIVIWFGIDETAKILL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHCCCHHHHHHH IYLACFAPIALAARAGVRSASVEQVHAALSLGASRWQLVRHVIVPAALPEILVGLRIAIG HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGWTTLVAAEMVAATVGIGQMVLNASNFLRTDLVVAGILVIGLVAWTFDLVMRWVEARAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PWKGRA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503 [H]