Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
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Accession | NC_008750 |
Length | 4,708,380 |
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The map label for this gene is 120597576
Identifier: 120597576
GI number: 120597576
Start: 830830
End: 831399
Strand: Direct
Name: 120597576
Synonym: Sputw3181_0745
Alternate gene names: NA
Gene position: 830830-831399 (Clockwise)
Preceding gene: 120597575
Following gene: 120597577
Centisome position: 17.65
GC content: 44.39
Gene sequence:
>570_bases ATGTTCCATATTTATGACTTACATCAATGTTGTGATGTAACAGGCTATTGCCCACAAATATTGGGCTGCTTTATTCTGTT CGATATGGATTTTTATCTAGGTTGGGATACCAACATGATAGTGTCATCAGTTAATGGCCGCTTACGTCTTAAAATTCCTT CCGAGAAGTTAACCTGCTTAAGCCTGTTGCAACAGCAACTCGAAGCGTTGCCCGAAACACTGGCGGTTCGGGTTAATTGG TCTGCGCGCAGTCTTATTCTCACCTATCAGCCGTCATATCCTAAGGCTGAAATGGAACAAAAACTAACGCAGTTGATAGA GAATTTCGTGGGGCAGGTTGAGGCGCCCATCTCATTAGATATAAACCACCATCAAATCTCACGCCCTAGAAAACATGCTC GGCGTCGAGATATTAATCGATTCGCCAAAACCGCCGCCATTATTAGCCTGCCATTATCCATTGGGCTTGTGTATTCCGGA TTTAAACGCTGGCATGCCATTACGGGATGGTGTTTTATTGCCGCGGCGGCAACCCATGTATTCATTCACCGTAAGAATAC TTTTCGTTAG
Upstream 100 bases:
>100_bases TAACTCGGTATCTAAAGCGAACTCTAGGGTTCGCTTTTTTTATGGCTTCACCTTAAAGAATTTGAATTCCCGCATTAGGC TTCAGGCCCACTTAAAATAA
Downstream 100 bases:
>100_bases TCACCCATTGATGATATTGCATGAATAAACTTGAAAAATTGCGAGAGCTGACTGAACACATTCTCGTTGCTCACCATGTA CCGGGCAGGATCCGATTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MFHIYDLHQCCDVTGYCPQILGCFILFDMDFYLGWDTNMIVSSVNGRLRLKIPSEKLTCLSLLQQQLEALPETLAVRVNW SARSLILTYQPSYPKAEMEQKLTQLIENFVGQVEAPISLDINHHQISRPRKHARRRDINRFAKTAAIISLPLSIGLVYSG FKRWHAITGWCFIAAAATHVFIHRKNTFR
Sequences:
>Translated_189_residues MFHIYDLHQCCDVTGYCPQILGCFILFDMDFYLGWDTNMIVSSVNGRLRLKIPSEKLTCLSLLQQQLEALPETLAVRVNW SARSLILTYQPSYPKAEMEQKLTQLIENFVGQVEAPISLDINHHQISRPRKHARRRDINRFAKTAAIISLPLSIGLVYSG FKRWHAITGWCFIAAAATHVFIHRKNTFR >Mature_189_residues MFHIYDLHQCCDVTGYCPQILGCFILFDMDFYLGWDTNMIVSSVNGRLRLKIPSEKLTCLSLLQQQLEALPETLAVRVNW SARSLILTYQPSYPKAEMEQKLTQLIENFVGQVEAPISLDINHHQISRPRKHARRRDINRFAKTAAIISLPLSIGLVYSG FKRWHAITGWCFIAAAATHVFIHRKNTFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21777; Mature: 21777
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHIYDLHQCCDVTGYCPQILGCFILFDMDFYLGWDTNMIVSSVNGRLRLKIPSEKLTCL CCEEECHHHHHCCCCCHHHHHHHHHHHHHHHEECCCHHHHEECCCCEEEEEECCHHHHHH SLLQQQLEALPETLAVRVNWSARSLILTYQPSYPKAEMEQKLTQLIENFVGQVEAPISLD HHHHHHHHHCHHHEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEC INHHQISRPRKHARRRDINRFAKTAAIISLPLSIGLVYSGFKRWHAITGWCFIAAAATHV CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIHRKNTFR EEECCCCCC >Mature Secondary Structure MFHIYDLHQCCDVTGYCPQILGCFILFDMDFYLGWDTNMIVSSVNGRLRLKIPSEKLTCL CCEEECHHHHHCCCCCHHHHHHHHHHHHHHHEECCCHHHHEECCCCEEEEEECCHHHHHH SLLQQQLEALPETLAVRVNWSARSLILTYQPSYPKAEMEQKLTQLIENFVGQVEAPISLD HHHHHHHHHCHHHEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEC INHHQISRPRKHARRRDINRFAKTAAIISLPLSIGLVYSGFKRWHAITGWCFIAAAATHV CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIHRKNTFR EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA