Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597576

Identifier: 120597576

GI number: 120597576

Start: 830830

End: 831399

Strand: Direct

Name: 120597576

Synonym: Sputw3181_0745

Alternate gene names: NA

Gene position: 830830-831399 (Clockwise)

Preceding gene: 120597575

Following gene: 120597577

Centisome position: 17.65

GC content: 44.39

Gene sequence:

>570_bases
ATGTTCCATATTTATGACTTACATCAATGTTGTGATGTAACAGGCTATTGCCCACAAATATTGGGCTGCTTTATTCTGTT
CGATATGGATTTTTATCTAGGTTGGGATACCAACATGATAGTGTCATCAGTTAATGGCCGCTTACGTCTTAAAATTCCTT
CCGAGAAGTTAACCTGCTTAAGCCTGTTGCAACAGCAACTCGAAGCGTTGCCCGAAACACTGGCGGTTCGGGTTAATTGG
TCTGCGCGCAGTCTTATTCTCACCTATCAGCCGTCATATCCTAAGGCTGAAATGGAACAAAAACTAACGCAGTTGATAGA
GAATTTCGTGGGGCAGGTTGAGGCGCCCATCTCATTAGATATAAACCACCATCAAATCTCACGCCCTAGAAAACATGCTC
GGCGTCGAGATATTAATCGATTCGCCAAAACCGCCGCCATTATTAGCCTGCCATTATCCATTGGGCTTGTGTATTCCGGA
TTTAAACGCTGGCATGCCATTACGGGATGGTGTTTTATTGCCGCGGCGGCAACCCATGTATTCATTCACCGTAAGAATAC
TTTTCGTTAG

Upstream 100 bases:

>100_bases
TAACTCGGTATCTAAAGCGAACTCTAGGGTTCGCTTTTTTTATGGCTTCACCTTAAAGAATTTGAATTCCCGCATTAGGC
TTCAGGCCCACTTAAAATAA

Downstream 100 bases:

>100_bases
TCACCCATTGATGATATTGCATGAATAAACTTGAAAAATTGCGAGAGCTGACTGAACACATTCTCGTTGCTCACCATGTA
CCGGGCAGGATCCGATTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MFHIYDLHQCCDVTGYCPQILGCFILFDMDFYLGWDTNMIVSSVNGRLRLKIPSEKLTCLSLLQQQLEALPETLAVRVNW
SARSLILTYQPSYPKAEMEQKLTQLIENFVGQVEAPISLDINHHQISRPRKHARRRDINRFAKTAAIISLPLSIGLVYSG
FKRWHAITGWCFIAAAATHVFIHRKNTFR

Sequences:

>Translated_189_residues
MFHIYDLHQCCDVTGYCPQILGCFILFDMDFYLGWDTNMIVSSVNGRLRLKIPSEKLTCLSLLQQQLEALPETLAVRVNW
SARSLILTYQPSYPKAEMEQKLTQLIENFVGQVEAPISLDINHHQISRPRKHARRRDINRFAKTAAIISLPLSIGLVYSG
FKRWHAITGWCFIAAAATHVFIHRKNTFR
>Mature_189_residues
MFHIYDLHQCCDVTGYCPQILGCFILFDMDFYLGWDTNMIVSSVNGRLRLKIPSEKLTCLSLLQQQLEALPETLAVRVNW
SARSLILTYQPSYPKAEMEQKLTQLIENFVGQVEAPISLDINHHQISRPRKHARRRDINRFAKTAAIISLPLSIGLVYSG
FKRWHAITGWCFIAAAATHVFIHRKNTFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21777; Mature: 21777

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHIYDLHQCCDVTGYCPQILGCFILFDMDFYLGWDTNMIVSSVNGRLRLKIPSEKLTCL
CCEEECHHHHHCCCCCHHHHHHHHHHHHHHHEECCCHHHHEECCCCEEEEEECCHHHHHH
SLLQQQLEALPETLAVRVNWSARSLILTYQPSYPKAEMEQKLTQLIENFVGQVEAPISLD
HHHHHHHHHCHHHEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEC
INHHQISRPRKHARRRDINRFAKTAAIISLPLSIGLVYSGFKRWHAITGWCFIAAAATHV
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIHRKNTFR
EEECCCCCC
>Mature Secondary Structure
MFHIYDLHQCCDVTGYCPQILGCFILFDMDFYLGWDTNMIVSSVNGRLRLKIPSEKLTCL
CCEEECHHHHHCCCCCHHHHHHHHHHHHHHHEECCCHHHHEECCCCEEEEEECCHHHHHH
SLLQQQLEALPETLAVRVNWSARSLILTYQPSYPKAEMEQKLTQLIENFVGQVEAPISLD
HHHHHHHHHCHHHEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEC
INHHQISRPRKHARRRDINRFAKTAAIISLPLSIGLVYSGFKRWHAITGWCFIAAAATHV
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIHRKNTFR
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA