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The map label for this gene is ycaO [H]

Identifier: 120597575

GI number: 120597575

Start: 828526

End: 830712

Strand: Direct

Name: ycaO [H]

Synonym: Sputw3181_0744

Alternate gene names: 120597575

Gene position: 828526-830712 (Clockwise)

Preceding gene: 120597572

Following gene: 120597576

Centisome position: 17.6

GC content: 44.99

Gene sequence:

>2187_bases
ATGGAAATCAAAGTTAATTTTCTCGACAATCTTAGACTTGAAGCCAAGTTTGATGATTTTACCGTGACCGCCGATCAGCC
GATCCGCTACAAAGGTGATGGTTCTGCCCCTAGTCCGTTTGATTATTTTTTAGCGTCATCAGCCCTGTGTGCGGCCTATT
TCGTGAAGGTATATTGCAAAGCCCGTGATATTCCAACGGATAATATTCGCCTGTCGCAAAATAATATTGTTGATCCTGAA
GATCGCTATAACCAGATTTTCCAAATTCAGGTTGAGCTACCCGAAGATATTTCCGATAAAGATCGCGAAGGTATTTTGCG
CTCGATTGACCGTTGTACCGTTAAAAAAGTGGTACAAACGGGGCCAGAATTTAAGATTGAAACCGTTGAAAACCTCGATG
CCGATGCAAACGCTATGCTGATGGGGCATCCAGAGGGTGAGAGCAGCACTTATATCTTGGGTAAAGATTTACCGCTGGAG
CAGACCATTGCCAATATGACGGCGATGCTCGCCGATCTAGGCATGAAGATTGAAATCTCATCCTGGCGCAATATTGTGCC
GAACGTGTGGTCATTGCATATCCGCGACGCAGCCTCGCCAATGTGTTTCACCAATGGCAAAGGCGCAACCAAAGAAAGCG
CGCTGTGCTCGGCACTCGGTGAGTTTATTGAGCGGTTAAACAATAACTTTTTCTATAACGATCAGTTCTTTGGCGTTGAG
ATCGCCAATAGCGAATTTGTGCATTACCCCAATGAAAAGTGGTTTGCATTAGAAGAAGACGATTCGCTGCCAGCGGGGAT
TTTGGATGACTATTGTTTAGAGATTTATAACCCAGATGAGGAGCTTTGCGGCTCGCACTTGATTGACACCAATTCGGGCA
ATATCAAGCGCGGTATCTGTGCGATTCCTTATACCCGTAAATCCGACGGTGAAACGGTTTACTTCCCGTCAAACCTGATT
GAAAACCTCTTCTTAAGCAATGGTATGAGTGCGGGAAATAACCTTAACGAAGCCCATGTGCAGTGTTTATCAGAAATTTT
TGAACGTGCCGTTAAACGGCAAATCATTGAGCAAGAAATTGTCTTGCCCGATGTGCCTATGTCTGTGCTGGAAAAATACC
CTAGCATTTTGGCTGGCATTAACGGTTTAGAAGAACAAGGTTTCCCCGTGGTGGTAAAAGATGCCTCACTCGGCGGCCAG
TTCCCGGTAATGTGTCTCACTTTGATGAATCCGAAAACCGGTGGTGTATTTGCCTCTTTCGGCGCGCACCCAAGCTTTGA
AGTGGCGTTAGAGCGCAGCCTAACGGAATTGCTGCAAGGTCGCAGTTTTGAAGGGTTAAACGATGTGCCAAAACCCACTT
TTAACAGTATGGCGGTGACTGAGCCTGAAAACTTTGTTGAGCACTTTATCGACTCAACGGGCGTGATTTCATGGCGCTTT
TTTAGCAGCAAGCATGACTATGAGTTCTGCGAATGGGATTTCTCCGGCACTAACGAAGAAGAAGCGGAACGCTTATTCGG
CATCTTAGAAGACCTAGGGAAAGAGGTGTATATTGCTGAGTTTACCGATTTAGGCGCCTCGGCCTGTCGTATTCTTGTGC
CTGATTATTCTGAGATTTATCCTGTTGATGACTTGATTTGGGACAACACCAACAAGGCGTTGGCGTACCGTGAAGATATC
TTAAATCTGCATTCATTAAGCACTAAACAACTGGCTAATTTGGTTAACCGTTTAGAAGAAAGCCAACTCGATAACTATAC
GGATATTCGTACCCTGATCGGCATTGTATTTGATGAAAATACCGTGTGGGGTAAGCTGACGATTATCGAGCTGAAAATAT
TGATTTATTTGGCACTCGGTGAGCATGAAGAAGCCCTTGAGTTGGTCGGTGAGTTCCTGCAATTTAACGATAACACGGTT
AAACGTGGTTTGTTCTACCAAGCGATGAATGCCGTGCTGGAAGTGACCTTAGATGAAGACCTCGAACTCGAAGACTTTAT
CCATAATTTCACCCGTATGTTTGGTGAGGAAGTGATGAATGAGGTGGTCGGTAGTGTCACAGGTAAAGTGCGCTTTAGCG
GACTAACCAAGACCAGTATGCAACTTGAGGGTATTGAGCCGCACTTAAGGCTTATTGAAAGCTATAAAAAACTGCATCAA
GCCCGTAAAGCTAAAATGGCTAATTAA

Upstream 100 bases:

>100_bases
GCGAAAAACACCGATAATTCACCCCTAATGACTCATTACCGATGAAGCGTCTTGGTTAATGGCTGCTACAGACTCACATA
TTTAGTGGAAATCATATTCA

Downstream 100 bases:

>100_bases
CCTGATTTATTGACTGATAACTCGGTATCTAAAGCGAACTCTAGGGTTCGCTTTTTTTATGGCTTCACCTTAAAGAATTT
GAATTCCCGCATTAGGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 728; Mature: 728

Protein sequence:

>728_residues
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCKARDIPTDNIRLSQNNIVDPE
DRYNQIFQIQVELPEDISDKDREGILRSIDRCTVKKVVQTGPEFKIETVENLDADANAMLMGHPEGESSTYILGKDLPLE
QTIANMTAMLADLGMKIEISSWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGVE
IANSEFVHYPNEKWFALEEDDSLPAGILDDYCLEIYNPDEELCGSHLIDTNSGNIKRGICAIPYTRKSDGETVYFPSNLI
ENLFLSNGMSAGNNLNEAHVQCLSEIFERAVKRQIIEQEIVLPDVPMSVLEKYPSILAGINGLEEQGFPVVVKDASLGGQ
FPVMCLTLMNPKTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVTEPENFVEHFIDSTGVISWRF
FSSKHDYEFCEWDFSGTNEEEAERLFGILEDLGKEVYIAEFTDLGASACRILVPDYSEIYPVDDLIWDNTNKALAYREDI
LNLHSLSTKQLANLVNRLEESQLDNYTDIRTLIGIVFDENTVWGKLTIIELKILIYLALGEHEEALELVGEFLQFNDNTV
KRGLFYQAMNAVLEVTLDEDLELEDFIHNFTRMFGEEVMNEVVGSVTGKVRFSGLTKTSMQLEGIEPHLRLIESYKKLHQ
ARKAKMAN

Sequences:

>Translated_728_residues
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCKARDIPTDNIRLSQNNIVDPE
DRYNQIFQIQVELPEDISDKDREGILRSIDRCTVKKVVQTGPEFKIETVENLDADANAMLMGHPEGESSTYILGKDLPLE
QTIANMTAMLADLGMKIEISSWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGVE
IANSEFVHYPNEKWFALEEDDSLPAGILDDYCLEIYNPDEELCGSHLIDTNSGNIKRGICAIPYTRKSDGETVYFPSNLI
ENLFLSNGMSAGNNLNEAHVQCLSEIFERAVKRQIIEQEIVLPDVPMSVLEKYPSILAGINGLEEQGFPVVVKDASLGGQ
FPVMCLTLMNPKTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVTEPENFVEHFIDSTGVISWRF
FSSKHDYEFCEWDFSGTNEEEAERLFGILEDLGKEVYIAEFTDLGASACRILVPDYSEIYPVDDLIWDNTNKALAYREDI
LNLHSLSTKQLANLVNRLEESQLDNYTDIRTLIGIVFDENTVWGKLTIIELKILIYLALGEHEEALELVGEFLQFNDNTV
KRGLFYQAMNAVLEVTLDEDLELEDFIHNFTRMFGEEVMNEVVGSVTGKVRFSGLTKTSMQLEGIEPHLRLIESYKKLHQ
ARKAKMAN
>Mature_728_residues
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCKARDIPTDNIRLSQNNIVDPE
DRYNQIFQIQVELPEDISDKDREGILRSIDRCTVKKVVQTGPEFKIETVENLDADANAMLMGHPEGESSTYILGKDLPLE
QTIANMTAMLADLGMKIEISSWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGVE
IANSEFVHYPNEKWFALEEDDSLPAGILDDYCLEIYNPDEELCGSHLIDTNSGNIKRGICAIPYTRKSDGETVYFPSNLI
ENLFLSNGMSAGNNLNEAHVQCLSEIFERAVKRQIIEQEIVLPDVPMSVLEKYPSILAGINGLEEQGFPVVVKDASLGGQ
FPVMCLTLMNPKTGGVFASFGAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVTEPENFVEHFIDSTGVISWRF
FSSKHDYEFCEWDFSGTNEEEAERLFGILEDLGKEVYIAEFTDLGASACRILVPDYSEIYPVDDLIWDNTNKALAYREDI
LNLHSLSTKQLANLVNRLEESQLDNYTDIRTLIGIVFDENTVWGKLTIIELKILIYLALGEHEEALELVGEFLQFNDNTV
KRGLFYQAMNAVLEVTLDEDLELEDFIHNFTRMFGEEVMNEVVGSVTGKVRFSGLTKTSMQLEGIEPHLRLIESYKKLHQ
ARKAKMAN

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=584, Percent_Identity=46.9178082191781, Blast_Score=548, Evalue=1e-157,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 82109; Mature: 82109

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCK
CEEEEEEHHCCEEEEECCCEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ARDIPTDNIRLSQNNIVDPEDRYNQIFQIQVELPEDISDKDREGILRSIDRCTVKKVVQT
HCCCCCCCEEECCCCCCCCHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC
GPEFKIETVENLDADANAMLMGHPEGESSTYILGKDLPLEQTIANMTAMLADLGMKIEIS
CCCEEEEEHHCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEC
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGVE
CHHCCCCCHHEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCEEEEEE
IANSEFVHYPNEKWFALEEDDSLPAGILDDYCLEIYNPDEELCGSHLIDTNSGNIKRGIC
ECCCCEEECCCCCEEEECCCCCCCCCHHHHHHHHHCCCCHHHCCCCEEECCCCCCCCCEE
AIPYTRKSDGETVYFPSNLIENLFLSNGMSAGNNLNEAHVQCLSEIFERAVKRQIIEQEI
ECCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
VLPDVPMSVLEKYPSILAGINGLEEQGFPVVVKDASLGGQFPVMCLTLMNPKTGGVFASF
CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCEEEEC
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVTEPENFVEHFIDSTGVISWRF
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCEEEEEE
FSSKHDYEFCEWDFSGTNEEEAERLFGILEDLGKEVYIAEFTDLGASACRILVPDYSEIY
ECCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCEEEECCCCHHHC
PVDDLIWDNTNKALAYREDILNLHSLSTKQLANLVNRLEESQLDNYTDIRTLIGIVFDEN
CCHHHEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCC
TVWGKLTIIELKILIYLALGEHEEALELVGEFLQFNDNTVKRGLFYQAMNAVLEVTLDED
CCEEEEEHEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECCCC
LELEDFIHNFTRMFGEEVMNEVVGSVTGKVRFSGLTKTSMQLEGIEPHLRLIESYKKLHQ
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEECCCCHHHHHHHHHHHHHH
ARKAKMAN
HHHHCCCC
>Mature Secondary Structure
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCK
CEEEEEEHHCCEEEEECCCEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ARDIPTDNIRLSQNNIVDPEDRYNQIFQIQVELPEDISDKDREGILRSIDRCTVKKVVQT
HCCCCCCCEEECCCCCCCCHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC
GPEFKIETVENLDADANAMLMGHPEGESSTYILGKDLPLEQTIANMTAMLADLGMKIEIS
CCCEEEEEHHCCCCCCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCEEEEC
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGVE
CHHCCCCCHHEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEECCEEEEEE
IANSEFVHYPNEKWFALEEDDSLPAGILDDYCLEIYNPDEELCGSHLIDTNSGNIKRGIC
ECCCCEEECCCCCEEEECCCCCCCCCHHHHHHHHHCCCCHHHCCCCEEECCCCCCCCCEE
AIPYTRKSDGETVYFPSNLIENLFLSNGMSAGNNLNEAHVQCLSEIFERAVKRQIIEQEI
ECCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
VLPDVPMSVLEKYPSILAGINGLEEQGFPVVVKDASLGGQFPVMCLTLMNPKTGGVFASF
CCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCEEEEC
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVTEPENFVEHFIDSTGVISWRF
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHCCCCEEEEEE
FSSKHDYEFCEWDFSGTNEEEAERLFGILEDLGKEVYIAEFTDLGASACRILVPDYSEIY
ECCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCEEEECCCCHHHC
PVDDLIWDNTNKALAYREDILNLHSLSTKQLANLVNRLEESQLDNYTDIRTLIGIVFDEN
CCHHHEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHEECCC
TVWGKLTIIELKILIYLALGEHEEALELVGEFLQFNDNTVKRGLFYQAMNAVLEVTLDED
CCEEEEEHEEEEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEECCCC
LELEDFIHNFTRMFGEEVMNEVVGSVTGKVRFSGLTKTSMQLEGIEPHLRLIESYKKLHQ
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEECCCCHHHHHHHHHHHHHH
ARKAKMAN
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]