Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597417

Identifier: 120597417

GI number: 120597417

Start: 642852

End: 643484

Strand: Direct

Name: 120597417

Synonym: Sputw3181_0586

Alternate gene names: NA

Gene position: 642852-643484 (Clockwise)

Preceding gene: 120597416

Following gene: 120597418

Centisome position: 13.65

GC content: 48.03

Gene sequence:

>633_bases
ATGACAAACGCTGACCTTCACTATTTTTATGAACCCCAAAAGGGCCATGGATTACCCCATGATCCTTTAAATGCCATTAT
TGCTCCCCGTCCAATCGGTTGGATCTCATCACGCAGTGCAGCAGGACAGCGCAATCTCGCGCCTTACAGTTTTTTCAATT
GTTTCAATTACAAACCACCCATCATAGGTTTTGCCAGCACAGGCTGGAAAGACAGTGTCGCTAATATTATCGAGACAGGG
GAGTTTGTGTGGAACCTCACCACTCGCAGCCTTGCCGAGCAGATGAATCAAACTTCTGCCATGTTGCCACGCGGTCAAGA
TGAGTTTAGCTTTGCTGGGCTCACTGCCAAAGCGGGCACTATTGTTAAGGCCGATTTAGTGGCTGAAAGCCCAGTGAATT
TTGAATGTAAATTGTCCCAATGTATCCAGTTAACCGCCGCTAATGGCGACAAGATTGATACTTGGTTAGTGTTAGGTGAA
GTGGTGGCCGTGCATATTGCCAAGCATTTACTCAATGCCGAGGGGATTTATCAAACTGCCCTTGCCGAGCCCGTTTTACG
TGCTGGTGGCCCATCCGCCTATTATGGGATCTCCGAAGCGTTACGTTTCGATTTGCATCGACCAGAAGTGTAG

Upstream 100 bases:

>100_bases
AAAATGAGCACACCGCTGTATGGATAGTCCCTCAAATGGGACAAGTTTTGGCTTGGACTCAGTACACCCAAGTGAAACTG
TAAACACTAGGATTAAGGGA

Downstream 100 bases:

>100_bases
GGGGGGCTCAGGCGCCGCAGGGCTTTGGGTTTTCAAACTTCGTTTGAGTTTTGGGCATTAGTTTAACTTTTTAAATCAAA
ATCAAAATCTAAGTCTAAGT

Product: flavoprotein oxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MTNADLHYFYEPQKGHGLPHDPLNAIIAPRPIGWISSRSAAGQRNLAPYSFFNCFNYKPPIIGFASTGWKDSVANIIETG
EFVWNLTTRSLAEQMNQTSAMLPRGQDEFSFAGLTAKAGTIVKADLVAESPVNFECKLSQCIQLTAANGDKIDTWLVLGE
VVAVHIAKHLLNAEGIYQTALAEPVLRAGGPSAYYGISEALRFDLHRPEV

Sequences:

>Translated_210_residues
MTNADLHYFYEPQKGHGLPHDPLNAIIAPRPIGWISSRSAAGQRNLAPYSFFNCFNYKPPIIGFASTGWKDSVANIIETG
EFVWNLTTRSLAEQMNQTSAMLPRGQDEFSFAGLTAKAGTIVKADLVAESPVNFECKLSQCIQLTAANGDKIDTWLVLGE
VVAVHIAKHLLNAEGIYQTALAEPVLRAGGPSAYYGISEALRFDLHRPEV
>Mature_209_residues
TNADLHYFYEPQKGHGLPHDPLNAIIAPRPIGWISSRSAAGQRNLAPYSFFNCFNYKPPIIGFASTGWKDSVANIIETGE
FVWNLTTRSLAEQMNQTSAMLPRGQDEFSFAGLTAKAGTIVKADLVAESPVNFECKLSQCIQLTAANGDKIDTWLVLGEV
VAVHIAKHLLNAEGIYQTALAEPVLRAGGPSAYYGISEALRFDLHRPEV

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 22949; Mature: 22818

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNADLHYFYEPQKGHGLPHDPLNAIIAPRPIGWISSRSAAGQRNLAPYSFFNCFNYKPP
CCCCCEEEEECCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC
IIGFASTGWKDSVANIIETGEFVWNLTTRSLAEQMNQTSAMLPRGQDEFSFAGLTAKAGT
EEEECCCCCHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHCCCCCCCCCEEECEEECCCC
IVKADLVAESPVNFECKLSQCIQLTAANGDKIDTWLVLGEVVAVHIAKHLLNAEGIYQTA
EEEEEEEECCCCCEEEEHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LAEPVLRAGGPSAYYGISEALRFDLHRPEV
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TNADLHYFYEPQKGHGLPHDPLNAIIAPRPIGWISSRSAAGQRNLAPYSFFNCFNYKPP
CCCCEEEEECCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC
IIGFASTGWKDSVANIIETGEFVWNLTTRSLAEQMNQTSAMLPRGQDEFSFAGLTAKAGT
EEEECCCCCHHHHHHHHHCCHHEEEHHHHHHHHHHHHHHHCCCCCCCCCEEECEEECCCC
IVKADLVAESPVNFECKLSQCIQLTAANGDKIDTWLVLGEVVAVHIAKHLLNAEGIYQTA
EEEEEEEECCCCCEEEEHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LAEPVLRAGGPSAYYGISEALRFDLHRPEV
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]